SRR2935265.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935265.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2684627
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGC	24496	0.912454504853002	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCG	19593	0.7298220572168872	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTC	18873	0.7030026890141535	No Hit
CTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGCT	12590	0.46896645232279943	No Hit
CCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC	10924	0.4069094142314742	No Hit
GCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC	10875	0.4050842072287882	No Hit
TCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC	9161	0.3412392112572808	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCGTAAGT	6792	0.2529960400457866	No Hit
GAACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCT	4592	0.17104797053743406	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTC	4357	0.16229442674904185	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCT	4191	0.15611107241341163	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTA	4117	0.15335463734813065	No Hit
TCCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG	3662	0.13640628660890322	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG	2860	0.10653249036085832	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCC	2825	0.10522877107322544	No Hit
CGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG	2800	0.10429754301063052	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCG	2703	0.10068437812776225	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGCGAT	20	7.0349727E-4	45.0	22
TCGATCG	20	7.0349727E-4	45.0	2
AATTCGG	20	7.0349727E-4	45.0	13
CGATCGG	25	3.8922033E-5	45.0	3
TATGGGA	3005	0.0	42.529118	4
TACGGGA	1105	0.0	42.352943	4
TCTACGG	485	0.0	42.216496	2
ACGGGTA	240	0.0	42.187504	5
ACGGGAG	975	0.0	42.0	5
CGTATGG	345	0.0	41.739132	2
TAATACG	750	0.0	41.7	4
TTACGGG	1715	0.0	41.588924	3
CCGATGA	1530	0.0	41.47059	18
TCTTACG	315	0.0	41.428574	1
AATACGG	750	0.0	41.4	5
TTATGGG	5030	0.0	41.287277	3
CCGATCG	55	6.184564E-11	40.909092	40
TATCCGA	50	1.0822987E-9	40.5	30
TTTACGG	1075	0.0	40.39535	2
CGATCGA	45	1.9299478E-8	40.0	41