##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935264.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2582175 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13717466864175 33.0 31.0 34.0 30.0 34.0 2 32.28925808669048 34.0 31.0 34.0 30.0 34.0 3 32.34888611345087 34.0 31.0 34.0 30.0 34.0 4 35.8703407011531 37.0 35.0 37.0 35.0 37.0 5 31.651616563555915 37.0 35.0 37.0 0.0 37.0 6 33.41088694608228 37.0 35.0 37.0 17.0 37.0 7 35.19615014474232 37.0 35.0 37.0 32.0 37.0 8 35.73946459864262 37.0 35.0 37.0 35.0 37.0 9 37.77820674431439 39.0 38.0 39.0 35.0 39.0 10 37.39683522611752 39.0 37.0 39.0 35.0 39.0 11 37.261388170824986 39.0 37.0 39.0 34.0 39.0 12 37.1743603744905 39.0 37.0 39.0 34.0 39.0 13 37.166620387851324 39.0 37.0 39.0 34.0 39.0 14 38.26016052358961 40.0 38.0 41.0 34.0 41.0 15 38.32611771084454 40.0 38.0 41.0 34.0 41.0 16 38.381834306350264 40.0 38.0 41.0 34.0 41.0 17 38.399690183663 40.0 38.0 41.0 34.0 41.0 18 38.393970974081924 40.0 38.0 41.0 34.0 41.0 19 38.43416073658834 40.0 38.0 41.0 34.0 41.0 20 38.34056134847561 40.0 37.0 41.0 34.0 41.0 21 38.306691839244046 40.0 37.0 41.0 34.0 41.0 22 38.271800323370805 40.0 37.0 41.0 34.0 41.0 23 38.22930320369456 40.0 37.0 41.0 34.0 41.0 24 38.18656868725009 40.0 37.0 41.0 34.0 41.0 25 38.09331396981227 40.0 37.0 41.0 34.0 41.0 26 38.05196704328715 40.0 37.0 41.0 34.0 41.0 27 38.00810944262105 40.0 37.0 41.0 34.0 41.0 28 37.97301073707243 40.0 37.0 41.0 34.0 41.0 29 37.955637785975 40.0 37.0 41.0 34.0 41.0 30 37.893241550243495 40.0 37.0 41.0 33.0 41.0 31 37.6467419907636 40.0 36.0 41.0 33.0 41.0 32 37.72948502715734 40.0 36.0 41.0 33.0 41.0 33 37.728161724127915 40.0 36.0 41.0 33.0 41.0 34 37.68890257244377 40.0 36.0 41.0 33.0 41.0 35 37.674427953179006 40.0 36.0 41.0 33.0 41.0 36 37.68194487205553 40.0 36.0 41.0 33.0 41.0 37 37.57848906445148 40.0 36.0 41.0 33.0 41.0 38 37.599546506336715 40.0 36.0 41.0 33.0 41.0 39 37.595928626061365 40.0 36.0 41.0 33.0 41.0 40 37.50342947321541 39.0 36.0 41.0 33.0 41.0 41 37.4485660344477 39.0 36.0 41.0 33.0 41.0 42 37.44967285331165 39.0 36.0 41.0 33.0 41.0 43 37.40386883150832 39.0 36.0 41.0 33.0 41.0 44 37.355825999399734 39.0 36.0 41.0 32.0 41.0 45 37.34021783961195 39.0 35.0 41.0 32.0 41.0 46 37.168340643062535 39.0 35.0 41.0 32.0 41.0 47 37.10815184873217 39.0 35.0 41.0 32.0 41.0 48 37.11822591420024 39.0 35.0 41.0 32.0 41.0 49 37.140906406420946 39.0 35.0 41.0 32.0 41.0 50 37.07850203801059 39.0 35.0 41.0 32.0 41.0 51 36.37210258793459 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 5.0 10 7.0 11 14.0 12 16.0 13 15.0 14 29.0 15 39.0 16 62.0 17 98.0 18 235.0 19 377.0 20 698.0 21 1205.0 22 1996.0 23 3275.0 24 5072.0 25 7498.0 26 10652.0 27 14199.0 28 18779.0 29 24878.0 30 33890.0 31 45580.0 32 63023.0 33 91246.0 34 143287.0 35 190424.0 36 236044.0 37 368164.0 38 596480.0 39 724371.0 40 512.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.3005412104137 4.582183624270237 58.4258619187313 14.691413246584759 2 19.04088607472383 4.215051264922014 54.27742116626487 22.466641494089284 3 18.982020970693313 4.10421447035929 54.20565995720662 22.708104601740782 4 18.33229738495648 4.319149554154928 52.39943071248076 24.949122348407833 5 14.907239052349281 16.416664246226535 46.472179461113214 22.20391724031098 6 19.853418145555587 5.656859043248424 54.95204624008829 19.53767657110769 7 79.45871213221413 1.7168859585427014 12.470843378159884 6.3535585310832925 8 80.12969686407776 2.1035367471220967 9.859517654690329 7.90724873410981 9 75.38819018850388 4.43904847657498 12.733335269685439 7.439426065235702 10 35.9463630466564 29.71498833347856 19.750133124207306 14.588515495657731 11 23.040924801765954 25.93793991499414 29.79286841519262 21.228266868047285 12 20.641474725764134 22.197488551318173 35.33896811796257 21.822068604955124 13 21.353355214112135 24.40764084541133 35.260739492869384 18.978264447607152 14 18.49138807400738 27.227550417767965 32.39319565869857 21.88786584952608 15 16.07346519891177 26.6765033353665 35.24633303319876 22.00369843252297 16 17.283375448991645 26.966104156379796 31.803344080087527 23.947176314541036 17 17.140046666085762 27.46796789528208 29.26590955299312 26.126075885639043 18 17.240891883780147 25.578746599281615 34.085373764365315 23.09498775257293 19 19.04917366173865 26.595989814787924 31.301054343721862 23.05378217975157 20 20.284605032579126 29.50125378798881 30.629217616931463 19.584923562500606 21 21.19771123181039 28.766369436618355 30.543359764539584 19.49255956703167 22 18.66937755961544 26.983298963083445 29.1301712703438 25.217152206957312 23 17.65554232381616 27.656800952685234 28.07191611722676 26.615740606271842 24 20.693252781085715 26.640138642810808 28.46472450550408 24.201884070599398 25 17.705926205621232 28.408609021464464 25.97252316361207 27.912941609302234 26 16.397300725163863 28.65638463698239 27.022529456756416 27.923785181097333 27 18.46377569297201 27.05788724621685 28.31678720458528 26.161549856225857 28 15.276888669435651 27.17224820161298 30.135060559412125 27.415802569539245 29 16.144413140085394 23.922236099412316 31.3854792955551 28.54787146494719 30 19.22553661157745 26.422647574234897 29.54853950642385 24.803276307763802 31 18.79438845159604 32.21783961195504 25.19376107351361 23.794010862935316 32 19.160165364469876 28.892348504652087 26.108377627387764 25.839108503490277 33 18.385275978583945 27.019198931133637 26.96858268707582 27.6269424032066 34 17.197440142515514 27.172790380202738 27.871310039017494 27.758459438264254 35 16.9767347294432 24.322208990482828 26.978729172112658 31.722327107961313 36 18.261233262656482 25.58660818883306 26.771539496742086 29.380619051768374 37 16.483313485724242 29.8612990986281 29.22423925566625 24.43114815998141 38 17.68207034767202 29.169905215564395 29.671265502919052 23.47675893384453 39 18.121777183963133 25.66243573731447 32.68999970954719 23.525787369175212 40 20.399779255859883 25.90215612807033 30.810769990415054 22.88729462565473 41 20.469913929148873 26.309990608692285 24.719587169730943 28.500508292427895 42 20.6776457831092 23.569355291566218 25.026382797447887 30.726616127876692 43 19.76271941289804 23.660325113518642 27.79191960266055 28.78503587092277 44 17.488473864087446 23.72306292176169 28.784532419375143 30.003930794775723 45 19.291140220937773 22.794891903143668 27.728097437237984 30.185870438680567 46 20.72892038688315 23.298188542604585 30.316148208390214 25.65674286212205 47 16.151112918373077 25.880740073775016 31.297568909930582 26.67057809792133 48 16.548684732831816 24.007087048708936 30.848528856487263 28.59569936197198 49 19.582019034341204 21.25781560118892 33.25463998373464 25.905525380735234 50 19.514672708085236 20.600966239701027 30.859953333914238 29.024407718299493 51 17.567593211149514 20.710292679620864 27.57748797041254 34.14462613881708 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 761.0 1 1086.5 2 1412.0 3 3095.5 4 4779.0 5 3463.5 6 2148.0 7 2599.0 8 3050.0 9 4673.0 10 6296.0 11 7365.0 12 8434.0 13 8984.5 14 9535.0 15 9522.0 16 9509.0 17 9142.5 18 8776.0 19 8096.0 20 7416.0 21 8227.5 22 9039.0 23 9574.5 24 10110.0 25 11930.5 26 16189.0 27 18627.0 28 22246.5 29 25866.0 30 30061.5 31 34257.0 32 40666.5 33 47076.0 34 53559.0 35 60042.0 36 69383.5 37 78725.0 38 85335.0 39 91945.0 40 107164.5 41 122384.0 42 144031.0 43 165678.0 44 196833.0 45 227988.0 46 280969.5 47 333951.0 48 374068.5 49 414186.0 50 374360.5 51 334535.0 52 261939.5 53 189344.0 54 151189.5 55 113035.0 56 93498.0 57 73961.0 58 62618.5 59 51276.0 60 43523.0 61 35770.0 62 30066.5 63 24363.0 64 20459.0 65 16555.0 66 13348.5 67 10142.0 68 8178.0 69 6214.0 70 5235.0 71 4256.0 72 3541.0 73 2826.0 74 2514.0 75 1512.5 76 823.0 77 735.5 78 648.0 79 456.0 80 264.0 81 174.5 82 85.0 83 64.5 84 44.0 85 55.5 86 67.0 87 44.5 88 22.0 89 12.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2582175.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.62163107456627 #Duplication Level Percentage of deduplicated Percentage of total 1 61.48378242350403 15.75314790323922 2 14.43981249048808 7.39943096834399 3 7.156400751239678 5.500759796100358 4 3.9783027334188716 4.077224197543875 5 2.527311146675156 3.237691690537494 6 1.7830687943981234 2.741107849838422 7 1.2562718790294083 2.253141422969055 8 0.925013754286208 1.8960288920976571 9 0.6969207066520503 1.607062071065837 >10 4.962909142820413 27.535793900538692 >50 0.6117505418208746 10.190680676964183 >100 0.15566892937470328 7.465542014999025 >500 0.013318990297647614 2.3078655277718574 >1k 0.008344427656357543 4.096284517421616 >5k 4.814092878667813E-4 0.8324136940652217 >10k+ 6.418790504890417E-4 3.1058248765033514 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 22314 0.8641552179848383 Illumina PCR Primer Index 10 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 18990 0.735426529960208 Illumina PCR Primer Index 10 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGCT 18693 0.7239245984489819 Illumina PCR Primer Index 10 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 15543 0.6019344157541607 Illumina PCR Primer Index 10 (95% over 23bp) TCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 8238 0.3190333730285515 Illumina PCR Primer Index 10 (95% over 22bp) TTCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCT 6197 0.23999148005073245 Illumina PCR Primer Index 10 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCC 5811 0.22504284179035117 No Hit TGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 4479 0.17345842167939818 Illumina PCR Primer Index 10 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 4290 0.1661390107177089 Illumina PCR Primer Index 10 (95% over 22bp) TTCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 3899 0.15099673724670093 Illumina PCR Primer Index 10 (95% over 22bp) TTTCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 3895 0.15084182907819957 No Hit TGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGCTT 3797 0.14704657894991624 Illumina PCR Primer Index 10 (96% over 25bp) CGTTCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 3388 0.13120721872065216 No Hit CGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 3328 0.12888359619313178 Illumina PCR Primer Index 10 (95% over 22bp) TGCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCT 2737 0.10599591429705578 Illumina PCR Primer Index 10 (95% over 21bp) GTTCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 2722 0.10541500866517567 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2702 0.10464046782266886 No Hit TTGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCT 2662 0.10309138613765526 Illumina PCR Primer Index 10 (95% over 21bp) GTTTCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 2619 0.10142612332626563 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3236225275204044E-4 0.0 0.0 0.7571136735503984 0.0 2 2.3236225275204044E-4 0.0 0.0 3.1285640980955978 0.0 3 2.3236225275204044E-4 0.0 0.0 4.470572288865007 0.0 4 2.3236225275204044E-4 0.0 0.0 6.009468761799646 0.0 5 2.3236225275204044E-4 0.0 0.0 8.63551076127683 0.0 6 2.3236225275204044E-4 0.0 0.0 10.280015878087271 0.0 7 2.3236225275204044E-4 0.0 0.0 11.80078809530725 0.0 8 2.710892948773805E-4 0.0 0.0 14.164067113964004 0.0 9 2.710892948773805E-4 0.0 0.0 15.205630911925024 0.0 10 2.710892948773805E-4 0.0 0.0 17.0876877051323 0.0 11 2.710892948773805E-4 0.0 0.0 21.056551163263528 0.0 12 2.710892948773805E-4 0.0 0.0 24.20343315228441 0.0 13 2.710892948773805E-4 0.0 0.0 25.202513385033935 0.0 14 2.710892948773805E-4 0.0 0.0 25.51670587779682 0.0 15 2.710892948773805E-4 0.0 0.0 25.96562975011376 0.0 16 2.710892948773805E-4 0.0 0.0 27.0775218565744 0.0 17 2.710892948773805E-4 0.0 0.0 28.848586947050453 0.0 18 2.710892948773805E-4 0.0 0.0 30.790670655552006 0.0 19 2.710892948773805E-4 0.0 0.0 32.11610367229177 0.0 20 2.710892948773805E-4 0.0 0.0 33.356995556071915 0.0 21 3.4854337912806064E-4 0.0 0.0 35.04158316148209 0.0 22 3.4854337912806064E-4 0.0 0.0 36.7911934706207 0.0 23 3.872704212534007E-4 0.0 0.0 38.50695634494176 0.0 24 3.872704212534007E-4 0.0 0.0 39.83564243322006 0.0 25 3.872704212534007E-4 0.0 0.0 40.93839495773911 0.0 26 3.872704212534007E-4 0.0 0.0 41.89634707175153 0.0 27 3.872704212534007E-4 0.0 0.0 42.83536166216465 0.0 28 3.872704212534007E-4 0.0 0.0 43.83653315518894 0.0 29 3.872704212534007E-4 0.0 0.0 44.88239565482587 0.0 30 3.872704212534007E-4 0.0 0.0 46.01930543049948 0.0 31 4.2599746337874077E-4 0.0 0.0 47.01075643595031 0.0 32 4.2599746337874077E-4 0.0 0.0 47.93335076050229 0.0 33 4.2599746337874077E-4 0.0 0.0 48.840841538625384 0.0 34 4.2599746337874077E-4 0.0 0.0 49.738030923543135 0.0 35 4.2599746337874077E-4 0.0 0.0 50.70427062457037 0.0 36 4.647245055040809E-4 0.0 0.0 51.5757452535169 0.0 37 5.034515476294209E-4 0.0 0.0 52.40829920512746 0.0 38 5.42178589754761E-4 0.0 0.0 53.27075043325878 0.0 39 5.42178589754761E-4 0.0 0.0 54.163796024669125 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACCGTA 20 7.0349214E-4 45.000004 9 CGAAACG 25 3.892162E-5 45.0 12 ACGTTAC 25 3.892162E-5 45.0 14 GCGATAC 45 3.8562575E-10 45.0 9 ACTACGG 30 2.1665583E-6 44.999996 2 TCCGTCG 30 2.1665583E-6 44.999996 1 GCTACGA 140 0.0 43.392857 10 TACGGGA 910 0.0 43.021976 4 TTTACGG 1020 0.0 42.794117 2 GCACGGG 455 0.0 42.52747 3 CAACCCG 90 0.0 42.5 23 TTATGGG 5475 0.0 42.164387 3 TGCACGG 315 0.0 42.142857 2 TTACGGG 1580 0.0 42.00949 3 GTACGGG 370 0.0 41.959457 3 TATGGGA 4160 0.0 41.322113 4 ACGGGCC 110 0.0 40.909092 5 CGTTTTT 2485 0.0 40.835007 1 TCACGGG 700 0.0 40.821426 3 TTCTACG 300 0.0 40.500004 1 >>END_MODULE