##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935263.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2053005 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28910743032774 33.0 31.0 34.0 30.0 34.0 2 32.43308710889647 34.0 31.0 34.0 30.0 34.0 3 32.488405532378145 34.0 31.0 34.0 30.0 34.0 4 35.95104590587943 37.0 35.0 37.0 35.0 37.0 5 31.798336097574044 37.0 35.0 37.0 0.0 37.0 6 33.49350196419395 37.0 35.0 37.0 17.0 37.0 7 35.24902179975207 37.0 35.0 37.0 32.0 37.0 8 35.79027669197104 37.0 35.0 37.0 35.0 37.0 9 37.824589321506764 39.0 38.0 39.0 35.0 39.0 10 37.52691834652132 39.0 37.0 39.0 35.0 39.0 11 37.416422755911455 39.0 37.0 39.0 35.0 39.0 12 37.11853405130528 39.0 37.0 39.0 34.0 39.0 13 37.00069166904124 39.0 37.0 39.0 33.0 39.0 14 37.93430556671805 40.0 37.0 41.0 33.0 41.0 15 38.0838517197961 40.0 37.0 41.0 33.0 41.0 16 38.23775343947043 40.0 37.0 41.0 33.0 41.0 17 38.27034761240231 40.0 37.0 41.0 34.0 41.0 18 38.276731912489254 40.0 37.0 41.0 34.0 41.0 19 38.293997822703794 40.0 37.0 41.0 34.0 41.0 20 38.20018265907779 40.0 37.0 41.0 34.0 41.0 21 38.15787638120706 40.0 37.0 41.0 34.0 41.0 22 38.17004829506017 40.0 37.0 41.0 34.0 41.0 23 38.12973178341017 40.0 36.0 41.0 34.0 41.0 24 38.09477521973887 40.0 36.0 41.0 34.0 41.0 25 38.00207549421458 40.0 36.0 41.0 34.0 41.0 26 37.940822355522755 40.0 36.0 41.0 34.0 41.0 27 37.89470020774426 40.0 36.0 41.0 34.0 41.0 28 37.88568756530062 40.0 36.0 41.0 34.0 41.0 29 37.82400627373046 40.0 36.0 41.0 34.0 41.0 30 37.79293620814367 40.0 36.0 41.0 33.0 41.0 31 37.57366884152742 40.0 36.0 41.0 33.0 41.0 32 37.61145394190467 40.0 35.0 41.0 33.0 41.0 33 37.61567750687407 40.0 35.0 41.0 33.0 41.0 34 37.54911897438146 40.0 35.0 41.0 33.0 41.0 35 37.45988100369946 40.0 35.0 41.0 33.0 41.0 36 37.42876417738876 39.0 35.0 41.0 33.0 41.0 37 37.42337500395762 39.0 35.0 41.0 33.0 41.0 38 37.435652616530405 39.0 35.0 41.0 33.0 41.0 39 37.42408031154332 39.0 35.0 41.0 33.0 41.0 40 37.33480580904576 39.0 35.0 41.0 33.0 41.0 41 37.2397427186003 39.0 35.0 41.0 33.0 41.0 42 37.21822401796391 39.0 35.0 41.0 33.0 41.0 43 37.18099420118315 39.0 35.0 41.0 33.0 41.0 44 37.15743020596638 39.0 35.0 41.0 33.0 41.0 45 37.154874440149925 39.0 35.0 41.0 33.0 41.0 46 37.06845380308377 39.0 35.0 41.0 33.0 41.0 47 37.02578464251183 39.0 35.0 41.0 33.0 41.0 48 37.00769116490218 39.0 35.0 41.0 33.0 41.0 49 36.98196740874961 39.0 35.0 41.0 33.0 41.0 50 36.92120574474977 39.0 35.0 41.0 32.0 41.0 51 36.26475045116792 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 13.0 11 14.0 12 15.0 13 22.0 14 32.0 15 40.0 16 68.0 17 166.0 18 271.0 19 493.0 20 801.0 21 1309.0 22 2190.0 23 3250.0 24 4939.0 25 7384.0 26 9589.0 27 12376.0 28 15575.0 29 20097.0 30 26933.0 31 36425.0 32 51430.0 33 80944.0 34 142605.0 35 164574.0 36 167951.0 37 262468.0 38 423891.0 39 616548.0 40 585.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.872952087306167 4.487373386815912 53.71341034240052 15.92626418347739 2 20.855234156760456 4.652935574925536 51.937087342700096 22.554742925613915 3 21.556255342778023 4.8491357790166125 51.043275588710216 22.551333289495155 4 19.498491236017447 5.115866741678661 49.6096210189454 25.77602100335849 5 16.508045523513093 16.889876059727083 43.70695638831859 22.895122028441236 6 22.091568213423738 6.510310496077701 52.60298927669441 18.795132013804157 7 82.01996585492972 2.7291701676323243 9.845032038402245 5.405831939035706 8 83.22371353211511 2.8052050530807278 8.094817109554043 5.876264305250109 9 78.1456450422673 5.076363671788427 10.336117057678866 6.441874228265395 10 40.03380410666316 24.212410588381424 19.042135796064795 16.711649508890627 11 31.354039566391705 24.53199091088429 24.10870894128363 20.005260581440375 12 26.966763354205174 21.480707548203732 30.7593016091047 20.79322748848639 13 25.1187405778359 23.162875881938913 32.19568388776452 19.522699652460663 14 20.359229519655333 25.244020350656722 34.014919593473955 20.38183053621399 15 18.319536484324196 23.7611208935195 36.56771415559143 21.351628466564865 16 22.540519872089938 23.56306974410681 31.192081850750487 22.70432853305277 17 22.718941259276036 23.4463140615829 29.036753441905887 24.797991237235177 18 23.878022703305643 22.071889742109736 31.807326333837473 22.24276122074715 19 24.43057859089481 24.42502575492997 29.202656593627392 21.94173906054783 20 23.6242970669823 27.593454472833724 29.309865295018767 19.47238316516521 21 23.613142685965208 26.659165467205387 30.349317220367215 19.378374626462186 22 22.16166059020801 23.459027133397143 30.529979225574223 23.849333050820626 23 20.556111650970163 25.06442994537276 30.05228920533559 24.327169198321485 24 21.560395615207952 25.607244015479747 29.31590522185771 23.516455147454586 25 22.02245001838768 26.66671537575408 26.420003848017902 24.890830757840337 26 20.26361358106775 26.938365956244624 27.403537741018653 25.39448272166897 27 21.567068760183243 25.046943382992247 29.00533608052586 24.380651776298645 28 18.17409114931527 24.568279181005405 29.974890465439685 27.282739204239636 29 20.11631730073721 25.08308552585113 29.664516160457477 25.136081012954183 30 23.51587063840565 24.008270803042368 29.016587879717783 23.459270678834194 31 22.969744350354723 25.034132893003186 28.316638293623246 23.679484463018845 32 23.49443863994486 25.55176436491874 27.487122535015747 23.46667446012065 33 23.77480814708196 23.563313289543864 27.39949488676355 25.26238367661063 34 19.59966001056987 23.783186110116635 31.283070426034033 25.33408345327946 35 20.622794391635676 25.776556803320013 29.025647769976203 24.57500103506811 36 23.831846488440117 25.71279660789915 27.35317254463579 23.102184359024942 37 21.255087055316473 25.434131918821436 29.78857820609302 23.52220281976907 38 21.4729628033054 25.11864315966108 28.605093509270556 24.80330052776296 39 20.409886970562663 22.52537134590515 30.82140569555359 26.2433359879786 40 23.24178460354456 22.38918073750429 30.736262210759353 23.632772448191798 41 21.876566301592057 23.025418837265374 28.808064276511747 26.289950584630823 42 22.108129303143443 23.03379680030005 30.18083248701294 24.67724140954357 43 21.949776059970628 22.112610539185244 30.73752864703203 25.200084753812096 44 21.203845095360215 21.909055262895123 29.23426879135706 27.652830850387605 45 21.14680675400206 22.074179069218047 27.919318267612596 28.859695909167293 46 22.094588176843214 22.485819566927503 29.586922584211923 25.83266967201736 47 19.004629798758405 24.12166555853493 32.404499745495016 24.46920489721165 48 19.771456961868093 23.83647385174415 31.165584107198956 25.226485079188798 49 21.824057905363116 20.81275983253816 32.47386148596813 24.8893207761306 50 20.734679165418495 21.356986466180064 30.198562594830502 27.709771773570935 51 20.257427526966566 21.300386506608607 27.852197145160385 30.58998882126444 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 555.0 1 1207.0 2 1859.0 3 2723.5 4 3588.0 5 2703.0 6 1818.0 7 1934.0 8 2050.0 9 2448.0 10 2846.0 11 3056.0 12 3266.0 13 3303.5 14 3341.0 15 3349.0 16 3357.0 17 3729.5 18 4102.0 19 3863.0 20 3624.0 21 4471.5 22 5319.0 23 5767.5 24 6216.0 25 7983.0 26 13323.0 27 16896.0 28 18929.0 29 20962.0 30 24382.5 31 27803.0 32 34058.0 33 40313.0 34 45319.5 35 50326.0 36 54074.0 37 57822.0 38 64611.5 39 71401.0 40 80829.5 41 90258.0 42 102175.0 43 114092.0 44 128546.0 45 143000.0 46 169595.5 47 196191.0 48 226204.0 49 256217.0 50 247302.5 51 238388.0 52 202911.5 53 167435.0 54 147604.0 55 127773.0 56 113052.0 57 98331.0 58 88256.0 59 78181.0 60 68935.0 61 59689.0 62 51733.0 63 43777.0 64 39872.0 65 35967.0 66 28920.0 67 21873.0 68 18482.0 69 15091.0 70 12976.0 71 10861.0 72 9066.0 73 7271.0 74 6324.0 75 4103.0 76 2829.0 77 2321.0 78 1813.0 79 1301.0 80 789.0 81 532.0 82 275.0 83 239.0 84 203.0 85 133.0 86 63.0 87 51.5 88 40.0 89 23.0 90 6.0 91 3.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2053005.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.233845753190344 #Duplication Level Percentage of deduplicated Percentage of total 1 64.25986573683008 16.215235401238914 2 13.972554652920582 7.051625777796401 3 6.322725510634799 4.786400408253605 4 3.5302130990870983 3.5632341127302363 5 2.0988427942190153 2.6480937664758826 6 1.4082325877990405 2.132107434308224 7 0.96558615135634 1.7055816403319812 8 0.7147031653259546 1.4427767546521628 9 0.5333642974767168 1.211294917150758 >10 4.885968380219972 29.091859274385644 >50 1.1632300642824267 19.314260855782045 >100 0.12960045233802486 5.687107623645309 >500 0.010558472370047063 1.7817955784927026 >1k 0.00372651966001661 1.599003109816303 >5k 8.281154800036912E-4 1.7696233449398013 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 9824 0.47851807472461094 No Hit CTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGCT 8536 0.4157807701393811 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 8294 0.403993170985945 No Hit GCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 7220 0.35167961110664614 No Hit TCCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTG 3408 0.16600056989632272 No Hit GCCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTG 2438 0.11875275510775667 No Hit CGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTG 2239 0.109059646712989 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCC 2236 0.10891351945075632 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 2101 0.1023377926502858 No Hit TTCCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCT 2080 0.10131490181465705 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.42839642377880227 0.0 2 0.0 0.0 0.0 1.7382812024325318 0.0 3 0.0 0.0 0.0 2.5245920005065745 0.0 4 0.0 0.0 0.0 3.3790955209558673 0.0 5 0.0 0.0 0.0 4.896919393766698 0.0 6 0.0 0.0 0.0 5.906999739406382 0.0 7 0.0 0.0 0.0 6.808848492819063 0.0 8 0.0 0.0 0.0 8.207870901434726 0.0 9 0.0 0.0 0.0 8.819949293840006 0.0 10 0.0 0.0 0.0 10.120969018584953 0.0 11 0.0 0.0 0.0 12.47064668619901 0.0 12 0.0 0.0 0.0 14.4663067065107 0.0 13 4.870908741089281E-5 0.0 0.0 15.127581277200981 0.0 14 4.870908741089281E-5 0.0 0.0 15.374974732160906 0.0 15 4.870908741089281E-5 0.0 0.0 15.74404348747324 0.0 16 4.870908741089281E-5 0.0 0.0 16.60975009802704 0.0 17 9.741817482178562E-5 0.0 0.0 17.813205520687966 0.0 18 3.409636118762497E-4 0.0 0.0 19.136777552904157 0.0 19 3.409636118762497E-4 0.0 0.0 20.03268379765271 0.0 20 3.409636118762497E-4 0.0 0.0 20.979150075133767 0.0 21 3.409636118762497E-4 0.0 0.0 22.281631072501042 0.0 22 3.409636118762497E-4 0.0 0.0 23.56107267152296 0.0 23 3.409636118762497E-4 0.0 0.0 24.804956636734932 0.0 24 3.409636118762497E-4 0.0 0.0 25.770760421918116 0.0 25 3.896726992871425E-4 0.0 0.0 26.633788032664313 0.0 26 4.3838178669803533E-4 0.0 0.0 27.447716883300334 0.0 27 4.3838178669803533E-4 0.0 0.0 28.300515585690246 0.0 28 4.3838178669803533E-4 0.0 0.0 29.10499487336855 0.0 29 4.3838178669803533E-4 0.0 0.0 30.01000971746294 0.0 30 4.870908741089281E-4 0.0 0.0 30.98117150226132 0.0 31 4.870908741089281E-4 0.0 0.0 31.78808624431017 0.0 32 4.870908741089281E-4 0.0 0.0 32.542882262829366 0.0 33 4.870908741089281E-4 0.0 0.0 33.3211073523932 0.0 34 4.870908741089281E-4 0.0 0.0 34.147944111193105 0.0 35 4.870908741089281E-4 0.0 0.0 35.03527755655734 0.0 36 5.357999615198209E-4 0.0 0.0 35.79898733807273 0.0 37 5.357999615198209E-4 0.0 0.0 36.5871977905558 0.0 38 5.357999615198209E-4 0.0 0.0 37.45782401893809 0.0 39 5.357999615198209E-4 0.0 0.0 38.761376616228404 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAATT 35 1.2125565E-7 45.0 37 ACGCATT 20 7.034585E-4 45.0 21 TAACGCG 20 7.034585E-4 45.0 43 CACTCGA 20 7.034585E-4 45.0 18 GTCGTAG 40 6.8193913E-9 45.0 1 CGTCGAC 20 7.034585E-4 45.0 29 TACGGGT 205 0.0 43.90244 4 TTACGGG 1085 0.0 43.75576 3 CTACGAA 150 0.0 43.500004 11 CTACGGG 555 0.0 42.972973 3 TACGGGA 535 0.0 42.897194 4 TTTACGG 730 0.0 42.53425 2 TCTACGG 430 0.0 41.860466 2 TACCGTA 65 0.0 41.53846 18 CCGTACA 55 6.184564E-11 40.909092 20 CAACCCG 150 0.0 40.500004 23 GCGGATA 50 1.0822987E-9 40.5 5 TACGGGG 1040 0.0 40.45673 4 TTATGGG 4070 0.0 40.356266 3 TGTTACG 190 0.0 40.263157 1 >>END_MODULE