##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935262.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3629117 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45727293994655 33.0 31.0 34.0 31.0 34.0 2 32.60426241424567 34.0 31.0 34.0 31.0 34.0 3 32.660997427197856 34.0 31.0 34.0 31.0 34.0 4 36.06407068165617 37.0 35.0 37.0 35.0 37.0 5 31.6901918565866 37.0 35.0 37.0 0.0 37.0 6 33.466812726070835 37.0 35.0 37.0 17.0 37.0 7 35.282589676772616 37.0 35.0 37.0 32.0 37.0 8 35.844488618030226 37.0 35.0 37.0 35.0 37.0 9 37.908625982573724 39.0 38.0 39.0 35.0 39.0 10 37.65820501240384 39.0 37.0 39.0 35.0 39.0 11 37.522481363924065 39.0 37.0 39.0 35.0 39.0 12 37.16868125221645 39.0 37.0 39.0 34.0 39.0 13 37.04597233982812 39.0 37.0 39.0 33.0 39.0 14 38.007532135227386 40.0 37.0 41.0 33.0 41.0 15 38.17847426798309 40.0 37.0 41.0 33.0 41.0 16 38.330677682753134 40.0 37.0 41.0 34.0 41.0 17 38.350910428073824 40.0 37.0 41.0 34.0 41.0 18 38.34593924637866 40.0 37.0 41.0 34.0 41.0 19 38.35688212862798 40.0 37.0 41.0 34.0 41.0 20 38.27638486166194 40.0 37.0 41.0 34.0 41.0 21 38.22909016160129 40.0 37.0 41.0 34.0 41.0 22 38.243953556746725 40.0 37.0 41.0 34.0 41.0 23 38.21028779176863 40.0 36.0 41.0 34.0 41.0 24 38.18415361091968 40.0 36.0 41.0 34.0 41.0 25 38.08052096419046 40.0 36.0 41.0 34.0 41.0 26 38.03222629636906 40.0 36.0 41.0 34.0 41.0 27 37.98805880328466 40.0 36.0 41.0 34.0 41.0 28 37.95717746217606 40.0 36.0 41.0 34.0 41.0 29 37.88200876411535 40.0 36.0 41.0 34.0 41.0 30 37.8136329029899 40.0 36.0 41.0 34.0 41.0 31 37.58364941113775 40.0 35.0 41.0 33.0 41.0 32 37.611218100711554 40.0 35.0 41.0 33.0 41.0 33 37.61243602782716 40.0 35.0 41.0 33.0 41.0 34 37.50669047043675 40.0 35.0 41.0 33.0 41.0 35 37.410942937359145 40.0 35.0 41.0 33.0 41.0 36 37.3775979115581 39.0 35.0 41.0 33.0 41.0 37 37.34808329409054 39.0 35.0 41.0 33.0 41.0 38 37.31010463426779 39.0 35.0 41.0 33.0 41.0 39 37.3061011810862 39.0 35.0 41.0 33.0 41.0 40 37.20366689748498 39.0 35.0 41.0 33.0 41.0 41 37.09854353001019 39.0 35.0 41.0 33.0 41.0 42 37.092196256003874 39.0 35.0 41.0 33.0 41.0 43 37.066734139461474 39.0 35.0 41.0 33.0 41.0 44 37.022442649272534 39.0 35.0 41.0 33.0 41.0 45 36.96921592773118 39.0 35.0 41.0 33.0 41.0 46 36.88398031807737 39.0 35.0 41.0 33.0 41.0 47 36.824851609909516 38.0 35.0 41.0 33.0 41.0 48 36.76954311475767 38.0 35.0 41.0 32.0 41.0 49 36.72498682186328 38.0 35.0 41.0 32.0 41.0 50 36.644734793615086 38.0 35.0 40.0 32.0 41.0 51 36.01105227525043 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 14.0 9 24.0 10 24.0 11 40.0 12 35.0 13 61.0 14 68.0 15 106.0 16 168.0 17 315.0 18 526.0 19 909.0 20 1434.0 21 2479.0 22 3876.0 23 5887.0 24 8686.0 25 12696.0 26 17491.0 27 22436.0 28 27721.0 29 35024.0 30 45884.0 31 62167.0 32 89139.0 33 144596.0 34 264074.0 35 302008.0 36 294347.0 37 462979.0 38 719136.0 39 1103456.0 40 1310.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.021678827108634 4.374232079042919 54.17273678418194 16.43135230966651 2 19.983015152170623 4.258418783412053 53.27516307685865 22.48340298755868 3 21.898026434529392 4.610019462034429 50.255337593139046 23.236616510297132 4 19.199050347508777 5.072115338248946 50.01340546474529 25.715428849496995 5 16.75195371215643 17.597558855225664 43.30822070492629 22.342266727691612 6 22.416527215848923 6.799890992767662 51.33044759923695 19.453134192146464 7 85.3779583298086 2.6235858474664773 7.682915706492792 4.31554011623213 8 88.23961861797235 2.6194526106488163 5.412804271672696 3.7281244997061274 9 83.55622042496839 4.696404111523547 7.310097745539755 4.4372777179683105 10 44.668413831794346 24.911514288461902 14.765051664082476 15.655020215661274 11 34.648814022805 24.535307073318386 21.739282585819083 19.076596318057533 12 29.747539139686047 22.27167104284596 26.975046547135296 21.0057432703327 13 27.60081860132919 22.047070954174252 29.335207434756168 21.016903009740385 14 22.491834790666708 23.40483924877594 32.45742697190529 21.64589898865206 15 21.232547751973826 22.377729899587145 33.85616942082606 22.53355292761297 16 26.855485783456416 22.479848403895495 29.16282390454758 21.50184190810051 17 27.1201231594352 22.420798227227174 27.46998787859416 22.989090734743463 18 28.191706136782035 21.651575300548316 28.35957066140331 21.797147901266342 19 27.650224558756303 23.95307178027052 26.687869253044198 21.708834407928983 20 27.458249486032 27.127480320970637 26.11392798854377 19.300342204453592 21 26.479664337082546 25.63557471417979 28.289388300239427 19.595372648498245 22 25.619840859360554 21.813570628888517 29.857565903772187 22.709022607978746 23 23.922844041677354 23.952024693610046 29.443195135345597 22.681936129367006 24 23.972525548225644 25.620860391108913 28.2157340201487 22.190880040516742 25 25.97634631233989 24.926614380302425 25.220625292598726 23.87641401475896 26 22.584253965909614 25.278711047342924 26.550342686664553 25.586692300082913 27 22.892262773561722 23.835054091670234 29.13243083648171 24.14025229828633 28 20.794286874741154 25.63083526929553 27.985016740986858 25.589861114976454 29 23.173488206635387 25.492702494849297 27.70111848143777 23.632690817077542 30 26.05628311239346 23.287813537011896 28.485937488375274 22.169965862219378 31 26.09047875833157 24.954665280838288 26.687924362868433 22.266931597961708 32 27.04404404707812 24.56867607189297 26.203977441344545 22.183302439684365 33 27.72635878093762 23.6966182131907 25.560625353219528 23.016397652652145 34 22.927836165105727 24.772472201915782 29.234935109559707 23.06475652341878 35 23.336282627427003 26.33177712374663 28.17883799282305 22.153102256003322 36 26.231367023989584 26.848900159460275 25.986376300350745 20.933356516199396 37 24.311506077098095 27.92494703257018 25.29190985024732 22.471637040084406 38 25.659464822985868 26.81310632861933 25.011345735064477 22.516083113330325 39 25.187090964551434 23.523049821761052 25.86248941546938 25.427369798218137 40 25.398547360142977 23.354579089073184 27.1598848976211 24.086988653162738 41 22.022051093971342 24.553851529173627 26.97634162800483 26.447755748850206 42 22.360563189337793 24.373559739187243 28.716434328240176 24.54944274323479 43 22.803177742685065 23.250697070389297 29.293957731315913 24.652167455609725 44 23.969191403859398 23.046515171596837 28.07096051188209 24.913332912661676 45 23.86597070306634 22.60588457192204 26.628019983924467 26.900124741087154 46 23.15629394147392 23.373095990016303 27.84834437688286 25.622265691626918 47 21.397519010822744 25.337210125768884 29.858227221663007 23.40704364174536 48 22.226012553466862 26.341779556845367 28.45951232765436 22.97269556203341 49 25.114098002351536 23.603510165144854 28.270017197020653 23.012374635482956 50 22.91681420025863 24.322803591066368 26.762047076465155 25.99833513220985 51 22.172886682903858 24.59220796684152 26.146277455369997 27.088627894884628 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 682.0 1 1799.5 2 2917.0 3 5753.0 4 8589.0 5 6111.0 6 3633.0 7 3662.0 8 3691.0 9 4077.5 10 4464.0 11 4566.5 12 4669.0 13 4643.5 14 4618.0 15 4855.0 16 5092.0 17 5321.0 18 5550.0 19 6267.0 20 6984.0 21 7942.0 22 8900.0 23 10768.5 24 12637.0 25 15790.5 26 23197.0 27 27450.0 28 32180.5 29 36911.0 30 44548.5 31 52186.0 32 61304.0 33 70422.0 34 78050.0 35 85678.0 36 93770.0 37 101862.0 38 110377.0 39 118892.0 40 132253.0 41 145614.0 42 158786.5 43 171959.0 44 194302.0 45 216645.0 46 240258.5 47 263872.0 48 295141.0 49 326410.0 50 327796.0 51 329182.0 52 307998.0 53 286814.0 54 268131.5 55 249449.0 56 237732.5 57 226016.0 58 212051.0 59 198086.0 60 180790.0 61 163494.0 62 147135.5 63 130777.0 64 120059.5 65 109342.0 66 91174.0 67 73006.0 68 62953.0 69 52900.0 70 44991.0 71 37082.0 72 30910.5 73 24739.0 74 21089.5 75 14249.0 76 11058.0 77 8457.0 78 5856.0 79 4218.5 80 2581.0 81 1858.5 82 1136.0 83 793.0 84 450.0 85 320.5 86 191.0 87 153.5 88 116.0 89 116.5 90 117.0 91 63.5 92 10.0 93 6.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3629117.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.104490839014602 #Duplication Level Percentage of deduplicated Percentage of total 1 68.17953263350176 14.388943218720351 2 12.508108134944276 5.279545070946711 3 5.247220349878832 3.3221974141292647 4 2.740177603242242 2.3132021249959553 5 1.6437680042367102 1.7345443393439488 6 1.0881623691746638 1.3779067650964272 7 0.7529865869989099 1.1123978969053556 8 0.5546273403960429 0.9364102099564259 9 0.4071847170900909 0.7734083518453118 >10 4.290062784267112 22.189997706138517 >50 2.2143422571302076 33.3639352071288 >100 0.36303298690459174 10.59187027016991 >500 0.007811615432971019 1.1228775802503077 >1k 0.002556528687154147 1.0030092520310654 >5k 4.2608811452569115E-4 0.48975459234162866 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGCT 5560 0.15320531137464016 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 5503 0.15163468138392894 No Hit CCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC 5276 0.1453797163332017 No Hit GCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC 4652 0.1281854511717313 No Hit TCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC 4259 0.11735637070945909 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3724 0.10261449272646761 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7554912117741038E-5 0.0 0.0 0.1587438487103061 0.0 2 2.7554912117741038E-5 0.0 0.0 0.5767794204485553 0.0 3 2.7554912117741038E-5 0.0 0.0 0.8245531902112828 0.0 4 2.7554912117741038E-5 0.0 0.0 1.1481305232099157 0.0 5 2.7554912117741038E-5 0.0 0.0 1.737061659902395 0.0 6 2.7554912117741038E-5 0.0 0.0 2.267383498520439 0.0 7 2.7554912117741038E-5 0.0 0.0 2.732565524892143 0.0 8 2.7554912117741038E-5 0.0 0.0 3.445493766114457 0.0 9 2.7554912117741038E-5 0.0 0.0 3.8178708484736092 0.0 10 2.7554912117741038E-5 0.0 0.0 4.47130803443372 0.0 11 2.7554912117741038E-5 0.0 0.0 5.724836096493996 0.0 12 2.7554912117741038E-5 0.0 0.0 6.797907039095185 0.0 13 2.7554912117741038E-5 0.0 0.0 7.1408554753125895 0.0 14 2.7554912117741038E-5 0.0 0.0 7.273229273126217 0.0 15 2.7554912117741038E-5 0.0 0.0 7.464295033750634 0.0 16 5.5109824235482076E-5 0.0 0.0 7.894261882435865 0.0 17 5.5109824235482076E-5 0.0 0.0 8.490770619960724 0.0 18 8.266473635322311E-5 0.0 0.0 9.120124812729928 0.0 19 8.266473635322311E-5 0.0 0.0 9.586546810146931 0.0 20 8.266473635322311E-5 0.0 0.0 10.113672278959317 0.0 21 8.266473635322311E-5 0.0 0.0 10.860134848228922 0.0 22 8.266473635322311E-5 0.0 0.0 11.642611687636414 0.0 23 8.266473635322311E-5 0.0 0.0 12.366203679848294 0.0 24 1.1021964847096415E-4 0.0 0.0 12.964613706309276 0.0 25 1.1021964847096415E-4 0.0 0.0 13.487661048128237 0.0 26 1.377745605887052E-4 0.0 0.0 13.968136050725287 0.0 27 1.377745605887052E-4 0.0 0.0 14.499890744773452 0.0 28 1.377745605887052E-4 0.0 0.0 14.997670232180445 0.0 29 1.377745605887052E-4 0.0 0.0 15.59872553020473 0.0 30 1.377745605887052E-4 0.0 0.0 16.21973058460226 0.0 31 1.377745605887052E-4 0.0 0.0 16.744872099742167 0.0 32 1.377745605887052E-4 0.0 0.0 17.267864331736895 0.0 33 1.377745605887052E-4 0.0 0.0 17.809042805729327 0.0 34 1.377745605887052E-4 0.0 0.0 18.38122055585422 0.0 35 1.377745605887052E-4 0.0 0.0 18.99963544851268 0.0 36 1.377745605887052E-4 0.0 0.0 19.540069939877938 0.0 37 1.377745605887052E-4 0.0 0.0 20.114975626302485 0.0 38 1.377745605887052E-4 0.0 0.0 20.82925405821857 0.0 39 1.6532947270644623E-4 0.0 0.0 22.110199257835998 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAACG 20 7.035301E-4 45.0 29 AATCGTC 25 3.8924765E-5 45.0 12 TACGGGA 1530 0.0 42.205883 4 TTACGGG 2760 0.0 41.657608 3 TATGGGA 4140 0.0 41.630436 4 TTATGGG 7295 0.0 41.26799 3 TAACGGG 210 0.0 39.642857 3 CTTTACG 335 0.0 39.626865 1 TTTATGG 4565 0.0 39.38116 2 TTTACGG 1650 0.0 39.136364 2 TTTTACG 975 0.0 38.76923 1 TTTGGGC 7980 0.0 38.768795 4 TGTACGG 520 0.0 38.509617 2 TACGGGG 2650 0.0 38.377357 4 CTATGGG 3960 0.0 38.125 3 TATGGGC 2295 0.0 37.84314 4 AGACACG 1670 0.0 37.72455 24 CGACCAA 1660 0.0 37.680725 29 ATGGGCG 1005 0.0 37.61194 5 TATGGGG 7280 0.0 37.55151 4 >>END_MODULE