##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935261.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 619363 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07566160716736 33.0 31.0 34.0 30.0 34.0 2 32.22988296039641 34.0 31.0 34.0 30.0 34.0 3 32.29739910198058 34.0 31.0 34.0 30.0 34.0 4 35.79605982275338 37.0 35.0 37.0 35.0 37.0 5 31.603503922578522 37.0 35.0 37.0 0.0 37.0 6 33.315945576342145 37.0 35.0 37.0 17.0 37.0 7 35.102671615837565 37.0 35.0 37.0 32.0 37.0 8 35.63934397114455 37.0 35.0 37.0 35.0 37.0 9 37.63010544704802 39.0 37.0 39.0 35.0 39.0 10 37.36924549900462 39.0 37.0 39.0 34.0 39.0 11 37.261610719400416 39.0 37.0 39.0 34.0 39.0 12 36.975066318136534 39.0 35.0 39.0 33.0 39.0 13 36.76648427497283 39.0 35.0 39.0 33.0 39.0 14 37.757807618472526 40.0 36.0 41.0 33.0 41.0 15 37.92270284146777 40.0 36.0 41.0 33.0 41.0 16 38.057199090032825 40.0 36.0 41.0 34.0 41.0 17 38.09948931402102 40.0 36.0 41.0 34.0 41.0 18 38.119794046463866 40.0 36.0 41.0 34.0 41.0 19 38.14801013299148 40.0 36.0 41.0 34.0 41.0 20 38.0324720721128 40.0 36.0 41.0 34.0 41.0 21 37.953996283278144 40.0 36.0 41.0 34.0 41.0 22 37.9073289815504 40.0 36.0 41.0 34.0 41.0 23 37.879850749883346 39.0 36.0 41.0 34.0 41.0 24 37.856245852593716 39.0 36.0 41.0 34.0 41.0 25 37.72885690620848 39.0 36.0 41.0 33.0 41.0 26 37.690649909665254 39.0 35.0 41.0 33.0 41.0 27 37.65732696334783 39.0 35.0 41.0 33.0 41.0 28 37.62862166451661 39.0 36.0 41.0 33.0 41.0 29 37.5727093804441 39.0 36.0 41.0 33.0 41.0 30 37.57198767120413 39.0 36.0 41.0 33.0 41.0 31 37.336925195725286 39.0 35.0 41.0 33.0 41.0 32 37.36834941706237 39.0 35.0 41.0 33.0 41.0 33 37.40293172178512 39.0 35.0 41.0 33.0 41.0 34 37.38258501072877 39.0 35.0 41.0 33.0 41.0 35 37.29902012228693 39.0 35.0 41.0 33.0 41.0 36 37.305027907705174 39.0 35.0 41.0 33.0 41.0 37 37.22108036805557 39.0 35.0 41.0 33.0 41.0 38 37.1926350137157 39.0 35.0 41.0 33.0 41.0 39 37.18405361637683 39.0 35.0 41.0 33.0 41.0 40 37.1502834363693 39.0 35.0 41.0 33.0 41.0 41 37.11655039128912 39.0 35.0 41.0 33.0 41.0 42 37.108844086585734 39.0 35.0 41.0 33.0 41.0 43 36.99612666562258 39.0 35.0 41.0 32.0 41.0 44 36.864166894050825 39.0 35.0 40.0 32.0 41.0 45 36.8907458146515 39.0 35.0 40.0 32.0 41.0 46 36.80729071642962 39.0 35.0 40.0 32.0 41.0 47 36.75208238141445 39.0 35.0 40.0 32.0 41.0 48 36.74402248762035 39.0 35.0 40.0 32.0 41.0 49 36.76667317873363 39.0 35.0 40.0 32.0 41.0 50 36.679370579127266 39.0 35.0 40.0 31.0 41.0 51 35.9956826610566 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 9.0 12 6.0 13 6.0 14 11.0 15 24.0 16 22.0 17 31.0 18 68.0 19 122.0 20 225.0 21 422.0 22 622.0 23 1072.0 24 1598.0 25 2261.0 26 3054.0 27 3939.0 28 5011.0 29 6575.0 30 8839.0 31 12009.0 32 16859.0 33 25351.0 34 42106.0 35 63913.0 36 54621.0 37 83108.0 38 130699.0 39 156666.0 40 109.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.08862008224579 4.451509050427617 55.36365588515943 16.09621498216716 2 19.27593349941795 5.890729669030923 52.06203793252099 22.771298899030132 3 19.875258935390068 5.134953169627504 52.596457973756905 22.393329921225515 4 18.531620390627143 4.6044080773310645 52.565458382241104 24.298513149800684 5 15.261970766739374 17.17038311943077 45.02819832634497 22.539447787484885 6 19.615152987827816 6.994121379546405 54.043751402650784 19.34697422997499 7 77.0867810960616 2.258126494479005 13.510009477479281 7.145082931980115 8 76.75870208585273 3.5704425353145086 10.492715903274815 9.178139475557952 9 70.72766697397165 6.169725992673118 14.161162355516879 8.94144467783836 10 38.57673125453086 24.900260428859973 20.48217281303533 16.040835503573835 11 29.431044476341018 24.167895079299214 26.742475737168668 19.6585847071911 12 25.827826331246783 19.314682988812702 34.13232627715895 20.72516440278157 13 22.05071985249361 27.762556045485443 33.18425543663409 17.002468665386857 14 16.968885774578073 30.935170489680523 31.88792356017392 20.20802017556748 15 12.965579151483055 24.89460946165657 40.998574341702685 21.141237045157688 16 13.972097138511664 23.91295573032293 36.84382179755652 25.271125333608886 17 14.40786743799678 23.39791043378439 30.565597234578107 31.628624893640723 18 16.009835912058033 22.536864488191902 35.596249695251416 25.857049904498652 19 20.14844283562305 23.879534295719957 32.29947542878732 23.672547439869675 20 22.048298009406437 25.422894167071654 31.28811375558437 21.240694067937543 21 19.926763465043923 27.48129933496189 30.675064542118275 21.916872657875913 22 17.80942678203251 26.13184836678975 28.158285205929317 27.900439645248426 23 17.400619668917905 27.336150205937393 26.870187595965533 28.393042529179173 24 20.344935038095592 22.912573079115155 30.134509165061523 26.60798271772773 25 17.477472822884156 26.374517044124367 28.63361227583824 27.514397857153238 26 18.46219422212822 26.74021535028731 28.601966859499196 26.195623568085274 27 19.488409866265823 26.702596054333245 28.42856289445769 25.38043118494324 28 15.729709394975162 24.57670219241382 35.220541104328156 24.473047308282865 29 17.643611258664144 23.980444424352115 31.764893931345593 26.611050385638148 30 19.727042138455158 25.348947224810008 29.824028881286097 25.09998175544874 31 20.76552845423443 27.408159673729298 25.898382693186388 25.927929178849883 32 21.014816836007316 28.087728843989712 26.601685925701084 24.295768394301888 33 21.949163899038204 23.72453633814096 27.714603552359442 26.611696210461393 34 19.413171274357687 21.718120068522015 30.70154335987135 28.167165297248946 35 19.426895051851663 22.461787352489573 28.64055489268813 29.47076270297063 36 24.587196845791564 21.620439064006085 29.92784522162286 23.86451886857949 37 18.28443093952981 23.9139244675578 33.10304296511093 24.698601627801466 38 17.404978986474813 27.651312719681346 31.48702780114408 23.456680492699757 39 20.703690727408645 24.467396341079464 31.4647468447421 23.364166086769796 40 22.5100627580272 20.296175263940533 31.701280186255882 25.492481791776388 41 19.49099316555881 21.120086282196386 28.488947515431178 30.899973036813627 42 24.727502288641716 19.306610178522128 29.174490565306616 26.79139696752954 43 25.147934248574742 20.312482340727488 28.968795359102824 25.570788051594946 44 20.004262443833422 22.34279412880653 30.380406966512368 27.27253646084768 45 19.909972019639532 22.386225848169815 27.789196319444333 29.91460581274632 46 22.534604101310542 21.422170843269615 31.955412254203107 24.087812801216735 47 17.52235764809974 21.3613018536787 35.26413427989725 25.85220621832431 48 18.951729438148547 20.121156736840913 33.96231289243949 26.96480093257104 49 21.899596843854088 17.32312069012841 36.33975552301316 24.437526943004347 50 21.499669822059115 18.069209817183136 31.7439046245901 28.687215736167644 51 18.64302517263705 18.396481546362956 28.79070916409279 34.16978411690721 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 183.0 1 302.5 2 422.0 3 729.0 4 1036.0 5 786.0 6 536.0 7 694.5 8 853.0 9 1164.5 10 1476.0 11 1512.5 12 1549.0 13 1581.5 14 1614.0 15 1761.0 16 1908.0 17 1670.5 18 1433.0 19 1705.5 20 1978.0 21 1794.5 22 1611.0 23 1709.5 24 1808.0 25 1937.0 26 2694.0 27 3322.0 28 4475.5 29 5629.0 30 6295.0 31 6961.0 32 7527.0 33 8093.0 34 9439.0 35 10785.0 36 11529.5 37 12274.0 38 15387.5 39 18501.0 40 23524.0 41 28547.0 42 36440.0 43 44333.0 44 51613.0 45 58893.0 46 72492.5 47 86092.0 48 93442.0 49 100792.0 50 90876.0 51 80960.0 52 62567.5 53 44175.0 54 35107.0 55 26039.0 56 22310.0 57 18581.0 58 15702.0 59 12823.0 60 11254.0 61 9685.0 62 8746.5 63 7808.0 64 6589.5 65 5371.0 66 4340.0 67 3309.0 68 2921.5 69 2534.0 70 2279.0 71 2024.0 72 1732.0 73 1440.0 74 1182.5 75 701.5 76 478.0 77 367.5 78 257.0 79 197.5 80 138.0 81 111.5 82 85.0 83 53.0 84 21.0 85 12.5 86 4.0 87 7.5 88 11.0 89 5.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 619363.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.509404306777853 #Duplication Level Percentage of deduplicated Percentage of total 1 65.22012077267422 18.593867920450506 2 13.285826600617131 7.575420042134756 3 6.180538463043103 5.286104096294616 4 3.556615861028176 4.055879981838045 5 2.211928775109281 3.1530385873693203 6 1.5960828382206076 2.7302022565164488 7 1.1104190390731679 2.216016973441649 8 0.8490407778325705 1.936451744653592 9 0.6164489665626078 1.5817133540005892 >10 4.711359785861124 29.322600713097735 >50 0.5135796421860845 9.490256083001283 >100 0.13038773620910085 6.805051236856318 >500 0.010818196454030203 2.019016919135988 >1k 0.005124408846645885 2.562486017485183 >5k 0.0017081362822152953 2.67189407372394 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 5818 0.9393522054110433 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGCT 5484 0.8854258326700174 TruSeq Adapter, Index 19 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 5158 0.8327911095754832 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 4628 0.7472193204954123 TruSeq Adapter, Index 13 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTG 2040 0.3293706598553675 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGC 1552 0.2505800314193776 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTC 1378 0.22248665160818454 No Hit GCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTG 1312 0.21183054202462853 No Hit TTCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCT 1295 0.2090857865258338 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCG 1274 0.20569520620379325 No Hit TGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGCTT 1221 0.19713802729578617 TruSeq Adapter, Index 13 (95% over 23bp) TGCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTG 1086 0.17534143951123976 No Hit TTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTG 942 0.1520917458743903 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCC 840 0.1356232128816219 No Hit TTTCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTC 780 0.12593584053293463 No Hit CGCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTG 762 0.12302962882832846 No Hit TCTGACTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 757 0.1222223477992712 TruSeq Adapter, Index 13 (95% over 21bp) TGTTTCGGGGTTGTCCCAGACACTTGGAAAACTTACTGGGAAGATGTCTTG 733 0.11834739885979628 No Hit CGTTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTC 721 0.11640992439005882 No Hit GCGTTTGGGGTTATGGGCTATTACATCTCTAAGGAATTGGTGAAGTAAAAT 658 0.10623818342393716 No Hit GGCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCT 656 0.10591527101231427 No Hit TGCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCT 627 0.10123304104378207 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9162639679800053 0.0 2 0.0 0.0 0.0 3.592723491716489 0.0 3 0.0 0.0 0.0 5.005949661184152 0.0 4 0.0 0.0 0.0 6.670401686894438 0.0 5 0.0 0.0 0.0 9.316023075320935 0.0 6 0.0 0.0 0.0 11.035531667212927 0.0 7 0.0 0.0 0.0 12.616995203136126 0.0 8 0.0 0.0 0.0 15.178659364540666 0.0 9 0.0 0.0 0.0 16.478543277528686 0.0 10 0.0 0.0 0.0 18.83289767067132 0.0 11 0.0 0.0 0.0 22.592405422991042 0.0 12 0.0 0.0 0.0 26.273122546874774 0.0 13 0.0 0.0 0.0 27.34163971693498 0.0 14 1.6145620581145466E-4 0.0 0.0 27.683442504637828 0.0 15 1.6145620581145466E-4 0.0 0.0 28.223674969282957 0.0 16 1.6145620581145466E-4 0.0 0.0 29.652723846920143 0.0 17 1.6145620581145466E-4 0.0 0.0 31.736800551534397 0.0 18 1.6145620581145466E-4 0.0 0.0 34.4163277431813 0.0 19 1.6145620581145466E-4 0.0 0.0 35.8285851754141 0.0 20 1.6145620581145466E-4 0.0 0.0 37.26409230128374 0.0 21 1.6145620581145466E-4 0.0 0.0 39.09129218245197 0.0 22 1.6145620581145466E-4 0.0 0.0 40.65515699194172 0.0 23 1.6145620581145466E-4 0.0 0.0 42.09453906675084 0.0 24 1.6145620581145466E-4 0.0 0.0 43.24475307695164 0.0 25 1.6145620581145466E-4 0.0 0.0 44.202672746031006 0.0 26 1.6145620581145466E-4 0.0 0.0 45.04289084107381 0.0 27 1.6145620581145466E-4 0.0 0.0 45.79834442806561 0.0 28 1.6145620581145466E-4 0.0 0.0 46.555735489527144 0.0 29 1.6145620581145466E-4 0.0 0.0 47.37286534713891 0.0 30 1.6145620581145466E-4 0.0 0.0 48.322227837310265 0.0 31 1.6145620581145466E-4 0.0 0.0 49.165513600263495 0.0 32 1.6145620581145466E-4 0.0 0.0 49.939211738511986 0.0 33 1.6145620581145466E-4 0.0 0.0 50.666733401898405 0.0 34 1.6145620581145466E-4 0.0 0.0 51.443983576674746 0.0 35 1.6145620581145466E-4 0.0 0.0 52.26967061319452 0.0 36 1.6145620581145466E-4 0.0 0.0 52.975880057413825 0.0 37 1.6145620581145466E-4 0.0 0.0 53.61621536966206 0.0 38 1.6145620581145466E-4 0.0 0.0 54.28932629169001 0.0 39 1.6145620581145466E-4 0.0 0.0 54.93676567699394 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATGTAC 35 1.2107193E-7 45.000004 9 CAAAACG 30 2.1638734E-6 45.000004 15 CGTAAGG 30 2.1638734E-6 45.000004 2 CGATGAA 35 1.2107193E-7 45.000004 19 CTTGTAT 20 7.0307637E-4 45.0 41 TTCTACG 45 3.8380676E-10 45.0 1 CGAAAAG 20 7.0307637E-4 45.0 21 CTATCGC 20 7.0307637E-4 45.0 34 GCGCCCA 20 7.0307637E-4 45.0 19 GTCTACG 20 7.0307637E-4 45.0 1 ACGGGTA 90 0.0 45.0 5 ACGGGAG 110 0.0 45.0 5 TGGCACG 20 7.0307637E-4 45.0 32 TGACACT 20 7.0307637E-4 45.0 13 TTGACGT 20 7.0307637E-4 45.0 23 AGACATA 40 6.8066583E-9 45.0 43 TCGTAAG 20 7.0307637E-4 45.0 1 CCGACTC 45 3.8380676E-10 45.0 27 TCTCCCG 45 3.8380676E-10 45.0 1 TTAGTCA 45 3.8380676E-10 45.0 32 >>END_MODULE