##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935259.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3320965 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3375889237014 33.0 31.0 34.0 30.0 34.0 2 32.493908547666116 34.0 31.0 34.0 31.0 34.0 3 32.522675788513276 34.0 31.0 34.0 31.0 34.0 4 36.00343604946153 37.0 35.0 37.0 35.0 37.0 5 31.587670150091917 37.0 35.0 37.0 0.0 37.0 6 33.43097473174213 37.0 35.0 37.0 17.0 37.0 7 35.290165057445655 37.0 35.0 37.0 32.0 37.0 8 35.84696586684894 37.0 35.0 37.0 35.0 37.0 9 37.92126234392714 39.0 38.0 39.0 35.0 39.0 10 37.574689585707766 39.0 37.0 39.0 35.0 39.0 11 37.45080270343108 39.0 37.0 39.0 35.0 39.0 12 37.34741829558577 39.0 37.0 39.0 35.0 39.0 13 37.349641444580115 39.0 37.0 39.0 34.0 39.0 14 38.59670216337721 40.0 38.0 41.0 35.0 41.0 15 38.66750778764606 40.0 38.0 41.0 35.0 41.0 16 38.70349010001611 40.0 38.0 41.0 35.0 41.0 17 38.6835606517985 40.0 38.0 41.0 35.0 41.0 18 38.62010560183561 40.0 38.0 41.0 35.0 41.0 19 38.59019170632632 40.0 38.0 41.0 35.0 41.0 20 38.48253835857951 40.0 38.0 41.0 34.0 41.0 21 38.41796887350514 40.0 37.0 41.0 34.0 41.0 22 38.38442290117481 40.0 37.0 41.0 34.0 41.0 23 38.33527122387619 40.0 37.0 41.0 34.0 41.0 24 38.30857838007928 40.0 37.0 41.0 34.0 41.0 25 38.218332924315675 40.0 37.0 41.0 34.0 41.0 26 38.16128745710961 40.0 37.0 41.0 34.0 41.0 27 38.112258635667644 40.0 37.0 41.0 34.0 41.0 28 38.06417441918238 40.0 37.0 41.0 34.0 41.0 29 37.99877144143344 40.0 37.0 41.0 34.0 41.0 30 37.90711254108369 40.0 36.0 41.0 34.0 41.0 31 37.670550276802075 40.0 36.0 41.0 33.0 41.0 32 37.616752961865004 40.0 36.0 41.0 33.0 41.0 33 37.5205818188388 40.0 36.0 41.0 33.0 41.0 34 37.411845954413856 40.0 36.0 41.0 33.0 41.0 35 37.30499026638341 40.0 36.0 41.0 33.0 41.0 36 37.279730439796865 40.0 36.0 41.0 33.0 41.0 37 37.25037451463656 40.0 36.0 41.0 33.0 41.0 38 37.23621989391638 40.0 36.0 41.0 33.0 41.0 39 37.202051211018485 40.0 36.0 41.0 32.0 41.0 40 37.13398725972722 40.0 36.0 41.0 32.0 41.0 41 37.0784037169919 40.0 35.0 41.0 32.0 41.0 42 37.04466021171557 40.0 35.0 41.0 32.0 41.0 43 37.00807807369244 39.0 35.0 41.0 32.0 41.0 44 36.960503949906126 39.0 35.0 41.0 32.0 41.0 45 36.92884267072974 39.0 35.0 41.0 32.0 41.0 46 36.82840590009229 39.0 35.0 41.0 31.0 41.0 47 36.78716638085616 39.0 35.0 41.0 31.0 41.0 48 36.75052612719496 39.0 35.0 41.0 31.0 41.0 49 36.72231565222759 39.0 35.0 41.0 31.0 41.0 50 36.67105705721078 39.0 35.0 41.0 31.0 41.0 51 36.02612854998472 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 8.0 10 21.0 11 28.0 12 18.0 13 21.0 14 47.0 15 48.0 16 99.0 17 209.0 18 449.0 19 773.0 20 1425.0 21 2262.0 22 4096.0 23 6857.0 24 11656.0 25 19599.0 26 27102.0 27 29789.0 28 30525.0 29 33594.0 30 40696.0 31 52616.0 32 70886.0 33 104102.0 34 169753.0 35 240586.0 36 274627.0 37 436642.0 38 711693.0 39 1049619.0 40 1117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.291924184687282 4.1725221434131345 56.87518537533518 16.6603682965644 2 21.864427959945377 4.0152184681259815 52.96358136866844 21.156772203260196 3 18.711428756400625 4.038946511029174 54.55576918154813 22.693855551022068 4 17.62240794467873 4.384659278251954 53.77632706156192 24.216605715507388 5 15.023314006621568 17.091206923288862 46.90470992618109 20.980769143908475 6 19.93336274245588 6.1104829469747495 55.94798499833633 18.00816931223304 7 81.70733506676522 1.8605435468305145 11.677148057868722 4.754973328535531 8 84.37360827349882 2.0218520821508204 9.159024560632226 4.445515083718137 9 79.94868961280832 4.093087400800671 10.873465995576586 5.084756990814417 10 37.2424882526615 27.350815199798856 19.829808504455784 15.576888043083862 11 25.485574223155016 25.265608038627324 28.383376518572163 20.865441219645493 12 21.899146784142562 21.75729042612614 34.39936885814816 21.94419393158314 13 21.692821213111248 23.010239493641155 35.31015834252996 19.986780950717637 14 20.115297812533406 25.778380681518776 33.320706481399235 20.785615024548587 15 18.270593035458067 25.684552532170617 35.261106335056226 20.783748097315087 16 19.905569616060394 24.477162511498918 33.74323427076166 21.87403360167903 17 19.837486995496793 25.195688602559795 31.400120145800997 23.56670425614242 18 20.90627272494591 24.325218724075683 32.72063993447688 22.04786861650153 19 21.629827474845413 26.806184347019617 30.58062942548326 20.983358752651714 20 23.273506345294216 26.86893719144887 29.81196730468403 20.045589158572884 21 22.620623824701553 27.263912748252388 30.262077438334945 19.85338598871111 22 21.35361257947615 24.439884190288062 30.413328655978006 23.793174574257783 23 19.997049050501886 26.40587901408175 29.446802360157363 24.150269575259 24 20.77245619872537 25.714092138881316 30.9006869991102 22.612764663283112 25 20.73063100634906 27.237564984876382 28.53068309964122 23.501120909133338 26 19.55329249179079 28.526226563664476 29.29811063952797 22.622370305016766 27 20.13173881688003 26.885107190229345 30.536244736093277 22.446909256797344 28 19.037267782105502 27.071559019742757 31.075877041763462 22.81529615638828 29 20.213130821914717 25.59831253867475 30.760426562761122 23.42813007664941 30 21.164239912194198 27.280082747032864 30.049036951608944 21.50664038916399 31 21.799747964823478 28.861641119373438 27.4873718934105 21.851239022392587 32 20.88055730789093 29.47381258158397 26.98881198687731 22.656818123647795 33 21.461231900968546 28.14820391061032 27.08038175650752 23.310182431913613 34 20.611358445512074 28.1981893817008 27.314349895286462 23.876102277500667 35 20.14854116198153 27.206339121309618 27.804779634835054 24.840340081873794 36 20.36384002842547 29.001630550156353 27.41429072573785 23.220238695680322 37 20.678176373433626 28.83107771385727 28.498072096514115 21.99267381619499 38 20.878419375091276 28.976427032504105 26.542285149045536 23.602868443359085 39 21.977196387194688 26.980892601999717 26.87932573815141 24.162585272654184 40 22.327787254608225 26.132645179940166 27.925377111773237 23.614190453678376 41 20.18410311460675 26.134933671387685 27.38950877229962 26.29145444170595 42 19.86678570837091 26.66258150868799 27.229495041350933 26.24113774159017 43 20.301839977235534 25.912317654657606 29.048183284075563 24.7376590840313 44 20.600036435192784 26.333219410623116 27.88689432137948 25.179849832804624 45 21.70146327949858 25.841404531514183 27.065596897287385 25.391535291699853 46 21.712755178088297 26.454389010423174 28.11682748839569 23.716028323092836 47 19.259251452514555 27.39866273808968 29.366584712576017 23.975501096819748 48 19.120376155725822 26.121533951727887 29.355082031879288 25.403007860667003 49 20.930994454925 25.11185754742974 29.69218284444431 24.26496515320095 50 21.055536568437187 24.179176835648676 28.624300466882367 26.140986129031774 51 19.743749181337353 24.60622138444699 27.22058196939745 28.429447464818207 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 781.0 1 1447.5 2 2114.0 3 14960.0 4 27806.0 5 19116.5 6 10427.0 7 10603.5 8 10780.0 9 11568.5 10 12357.0 11 13200.0 12 14043.0 13 14158.0 14 14273.0 15 14038.0 16 13803.0 17 13465.0 18 13127.0 19 13020.0 20 12913.0 21 14072.5 22 15232.0 23 15875.0 24 16518.0 25 19759.0 26 27247.0 27 31494.0 28 35360.5 29 39227.0 30 46499.5 31 53772.0 32 60575.5 33 67379.0 34 76691.5 35 86004.0 36 99265.0 37 112526.0 38 125873.5 39 139221.0 40 154490.0 41 169759.0 42 190745.0 43 211731.0 44 235031.5 45 258332.0 46 298967.5 47 339603.0 48 365242.5 49 390882.0 50 362668.5 51 334455.0 52 283060.5 53 231666.0 54 199609.5 55 167553.0 56 146451.5 57 125350.0 58 112946.0 59 100542.0 60 92014.5 61 83487.0 62 72256.5 63 61026.0 64 52974.0 65 44922.0 66 36833.0 67 28744.0 68 23970.0 69 19196.0 70 16072.0 71 12948.0 72 11139.5 73 9331.0 74 7845.5 75 5377.0 76 4394.0 77 3360.5 78 2327.0 79 1672.0 80 1017.0 81 719.5 82 422.0 83 263.0 84 104.0 85 59.5 86 15.0 87 8.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3320965.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.66011989864341 #Duplication Level Percentage of deduplicated Percentage of total 1 69.03899041217164 19.786657428941325 2 13.02276123736871 7.464677969487862 3 5.35165054351291 4.601368386981605 4 2.7840986720244256 3.191704069994958 5 1.5888388970448488 2.276815664446686 6 1.0617290776611654 1.8257569599387051 7 0.7654486028332156 1.5356494113414327 8 0.552023429632334 1.2656846144098428 9 0.4481200823117227 1.1558857759239534 >10 4.36847427767602 29.088892382051736 >50 0.8869624624565592 16.800184580496637 >100 0.12093229275826486 6.070100509469568 >500 0.005601130645056027 1.092592996086105 >1k 0.0038087688386374144 2.296336324294078 >5k 4.480904516044017E-4 1.0692841742717725 >10k+ 1.1202261290110043E-4 0.4784087518637947 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14901 0.4486948823610005 No Hit CTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGCT 9170 0.2761245601805499 TruSeq Adapter, Index 15 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGC 8665 0.2609181367463975 No Hit CCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGC 8111 0.2442362385631887 No Hit GCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGC 7359 0.22159221792460929 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCC 4867 0.14655378782974227 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCT 4292 0.1292395433255093 No Hit TCCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTG 4176 0.12574658269509015 TruSeq Adapter, Index 15 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTG 3930 0.1183390972202357 TruSeq Adapter, Index 15 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTC 3901 0.1174658570626309 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTT 3883 0.11692384593032447 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.022345914515811E-5 0.0 0.0 0.28747668222941225 0.0 2 6.022345914515811E-5 0.0 0.0 1.063997964447081 0.0 3 6.022345914515811E-5 0.0 0.0 1.6484064119916952 0.0 4 6.022345914515811E-5 0.0 0.0 2.353382224744916 0.0 5 6.022345914515811E-5 0.0 0.0 3.64893938960513 0.0 6 6.022345914515811E-5 0.0 0.0 4.9290793489241835 0.0 7 9.033518871773717E-5 0.0 0.0 5.974829605250281 0.0 8 9.033518871773717E-5 0.0 0.0 7.464577314124058 0.0 9 9.033518871773717E-5 0.0 0.0 8.22375424010792 0.0 10 9.033518871773717E-5 0.0 0.0 9.459660068684855 0.0 11 1.2044691829031622E-4 0.0 0.0 11.598134879470274 0.0 12 1.2044691829031622E-4 0.0 0.0 13.34660256883165 0.0 13 1.2044691829031622E-4 0.0 0.0 13.979551124447262 0.0 14 1.2044691829031622E-4 0.0 0.0 14.209032615519886 0.0 15 1.2044691829031622E-4 0.0 0.0 14.495575834132548 0.0 16 1.2044691829031622E-4 0.0 0.0 15.153878466048273 0.0 17 1.2044691829031622E-4 0.0 0.0 16.215678274236556 0.0 18 1.2044691829031622E-4 0.0 0.0 17.352727294626714 0.0 19 1.2044691829031622E-4 0.0 0.0 18.174386059473676 0.0 20 1.5055864786289527E-4 0.0 0.0 18.945186113072555 0.0 21 1.5055864786289527E-4 0.0 0.0 20.059049101691826 0.0 22 1.5055864786289527E-4 0.0 0.0 21.264843200696184 0.0 23 1.5055864786289527E-4 0.0 0.0 22.497647521127142 0.0 24 1.5055864786289527E-4 0.0 0.0 23.409671586421418 0.0 25 1.5055864786289527E-4 1.2044691829031622E-4 0.0 24.199743146946744 0.0 26 1.5055864786289527E-4 1.2044691829031622E-4 0.0 24.90020220026408 0.0 27 1.5055864786289527E-4 1.2044691829031622E-4 0.0 25.58768309813563 0.0 28 1.8067037743547433E-4 1.2044691829031622E-4 0.0 26.33827818119131 0.0 29 1.8067037743547433E-4 1.2044691829031622E-4 0.0 27.122959742123147 0.0 30 1.8067037743547433E-4 1.2044691829031622E-4 0.0 27.940703982125676 0.0 31 1.8067037743547433E-4 1.2044691829031622E-4 0.0 28.726800794347426 0.0 32 1.8067037743547433E-4 1.2044691829031622E-4 0.0 29.461978671861942 0.0 33 2.107821070080534E-4 1.2044691829031622E-4 0.0 30.19727699629475 0.0 34 2.107821070080534E-4 1.2044691829031622E-4 0.0 30.903186272664723 0.0 35 2.107821070080534E-4 1.2044691829031622E-4 0.0 31.670884818117624 0.0 36 2.107821070080534E-4 1.2044691829031622E-4 0.0 32.41088057236376 0.0 37 2.4089383658063243E-4 1.2044691829031622E-4 0.0 33.129707780720366 0.0 38 2.4089383658063243E-4 1.2044691829031622E-4 0.0 33.870486439935384 0.0 39 2.4089383658063243E-4 1.2044691829031622E-4 0.0 34.574950353285864 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGCG 30 2.1667456E-6 45.000004 1 TCTACGG 595 0.0 42.73109 2 CGTTTTT 10630 0.0 42.69285 1 TTTACGG 1565 0.0 42.26837 2 CGTTATT 1430 0.0 42.01049 1 CTACGGG 1075 0.0 41.23256 3 TTATGGG 7300 0.0 40.869865 3 CGTATGG 535 0.0 40.79439 2 TTACGGG 2430 0.0 40.74074 3 TACGGGC 765 0.0 40.588238 4 TATGGGA 4675 0.0 40.379677 4 TACGGGT 485 0.0 40.360825 4 TATGGGC 2340 0.0 40.192307 4 TACGGGA 1465 0.0 39.93174 4 TACGGGG 1800 0.0 39.875 4 GTACGGG 765 0.0 39.705883 3 TTTTACG 1100 0.0 39.68182 1 ATAATCG 40 3.4608456E-7 39.375004 33 ATGGGCG 1015 0.0 39.236458 5 GCGTATG 155 0.0 39.193546 1 >>END_MODULE