##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935258.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1177371 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.855217259470464 33.0 31.0 34.0 30.0 34.0 2 32.015178732956734 33.0 31.0 34.0 30.0 34.0 3 31.94010638957474 33.0 31.0 34.0 30.0 34.0 4 35.69507742249469 37.0 35.0 37.0 33.0 37.0 5 33.09853733445108 37.0 35.0 37.0 28.0 37.0 6 34.191186975048645 37.0 35.0 37.0 28.0 37.0 7 35.52830840915905 37.0 35.0 37.0 32.0 37.0 8 35.53526203719983 37.0 35.0 37.0 33.0 37.0 9 37.65608886238917 39.0 37.0 39.0 35.0 39.0 10 37.0891350305044 39.0 37.0 39.0 33.0 39.0 11 36.88460731579086 39.0 37.0 39.0 32.0 39.0 12 37.26582190320638 39.0 37.0 39.0 34.0 39.0 13 37.300556918762226 39.0 37.0 39.0 34.0 39.0 14 38.4394171420903 40.0 38.0 41.0 34.0 41.0 15 38.54271932976097 40.0 38.0 41.0 34.0 41.0 16 38.498213392380144 40.0 38.0 41.0 34.0 41.0 17 38.42412544559022 40.0 38.0 41.0 34.0 41.0 18 38.07978029015493 39.0 38.0 40.0 34.0 41.0 19 37.571337326976796 38.0 37.0 40.0 34.0 41.0 20 37.06845505792142 38.0 35.0 40.0 33.0 41.0 21 36.97756696912018 38.0 35.0 40.0 33.0 41.0 22 36.92804731898442 38.0 35.0 40.0 33.0 41.0 23 36.675579745042135 38.0 35.0 40.0 33.0 41.0 24 36.34941492528693 37.0 35.0 40.0 32.0 41.0 25 36.15200731120437 37.0 35.0 40.0 31.0 41.0 26 36.42096161702641 37.0 35.0 40.0 32.0 41.0 27 36.33243811848602 38.0 35.0 40.0 32.0 41.0 28 36.3315463010385 38.0 35.0 40.0 32.0 41.0 29 36.32971255449642 38.0 35.0 40.0 32.0 41.0 30 35.92672148371244 38.0 35.0 40.0 31.0 41.0 31 35.500665465685834 38.0 35.0 40.0 29.0 41.0 32 34.7736890071184 38.0 35.0 40.0 22.0 41.0 33 33.91685203729326 38.0 33.0 40.0 17.0 41.0 34 33.13570828566357 38.0 33.0 40.0 12.0 41.0 35 32.60532916132638 38.0 33.0 40.0 10.0 41.0 36 32.28405574793332 38.0 31.0 40.0 8.0 41.0 37 32.150079286817835 37.0 31.0 40.0 8.0 41.0 38 32.0404689770684 37.0 31.0 40.0 8.0 41.0 39 31.888168640131276 37.0 30.0 40.0 8.0 41.0 40 31.746221879084842 37.0 30.0 40.0 8.0 41.0 41 31.60972114991791 37.0 29.0 40.0 7.0 41.0 42 31.595433385058744 37.0 29.0 40.0 7.0 41.0 43 31.46948582902076 37.0 29.0 40.0 7.0 41.0 44 31.346756459943382 37.0 27.0 40.0 7.0 41.0 45 31.329875629686818 37.0 27.0 40.0 7.0 41.0 46 31.19358893670729 37.0 26.0 40.0 7.0 41.0 47 31.087026094578516 36.0 25.0 40.0 7.0 41.0 48 30.98710601840881 36.0 25.0 40.0 7.0 41.0 49 30.914600410575765 36.0 25.0 40.0 7.0 41.0 50 30.797987210488454 36.0 24.0 40.0 7.0 41.0 51 30.01306979703084 35.0 23.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 12.0 10 30.0 11 26.0 12 22.0 13 52.0 14 67.0 15 122.0 16 246.0 17 534.0 18 980.0 19 1925.0 20 3321.0 21 5208.0 22 8323.0 23 12981.0 24 21641.0 25 36725.0 26 51059.0 27 50855.0 28 41760.0 29 32959.0 30 29286.0 31 29069.0 32 32201.0 33 40243.0 34 56828.0 35 83635.0 36 110515.0 37 132681.0 38 201521.0 39 192491.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.11953836131517 18.086907185585513 19.681221976760085 33.11233247633923 2 48.78920917875504 19.51440964657699 19.63815993429429 12.05822124037368 3 21.105921582916515 19.679778081845058 47.86256838328785 11.351731951950574 4 18.2319761570482 20.251390598205663 48.5389906834804 12.977642561265734 5 16.0590841799229 28.73512257393804 43.38700375667483 11.818789489464239 6 17.415920725073065 26.852113734753107 45.5633780685952 10.168587471578627 7 56.65928581560104 5.564855937508228 34.07583505963711 3.7000231872536355 8 57.22469807732652 5.1525814717705805 33.355076692053736 4.2676437588491645 9 52.9272421352318 7.020811621825236 34.81281601126578 5.239130231677186 10 24.622230375981744 24.973861255288266 40.52053261036666 9.883375758363337 11 15.471928559477005 21.38170551168663 48.360966933957094 14.78539899487927 12 14.545117894019812 19.248732982212065 51.36647666708285 14.839672456685276 13 15.54930433992344 20.69695958198393 51.395269630388384 12.35846644770425 14 13.399599616433564 23.153194702434494 48.921622835962495 14.525582845169449 15 11.978127540087193 23.349989085853142 50.238285128476925 14.433598245582743 16 13.477400071855005 23.993711412970082 47.623306502368415 14.905582012806498 17 13.06257755626731 23.860193600827607 46.52518195199305 16.552046890912038 18 13.731950251874729 22.972962643041146 49.188828330237456 14.106258774846673 19 12.580996134608377 25.06304300003992 47.567589145647375 14.788371719704324 20 13.221915606890267 26.117935637959487 47.27031666314186 13.38983209200838 21 13.041598612501923 25.208451711482617 48.188463959108894 13.561485716906565 22 12.428367948590546 23.4825726130506 46.63177537072002 17.45728406763883 23 11.875356196135288 24.501707618074505 46.80257964566819 16.820356540122017 24 12.979935806130777 24.054185129411206 46.65988885406554 16.305990210392476 25 11.787873151283664 25.86423480788978 45.14999944792253 17.197892592904022 26 11.908056169210894 25.831534834814175 46.334163148234495 15.92624584774043 27 13.228455601505388 23.98165064367986 47.38506384138899 15.404829913425761 28 10.994835102953953 24.35697838659182 46.86662063189937 17.781565878554847 29 11.952477171596719 22.558649737423465 46.52119000722797 18.96768308375185 30 13.642853442118074 24.126464810157547 46.35539689698489 15.875284850739488 31 12.1455344152353 26.272262523877348 44.113113028943296 17.469090031944052 32 12.375453446704565 25.68417261848644 42.02592046177458 19.914453473034413 33 14.154926526982575 25.009024343218915 42.332026183760256 18.504022946038248 34 12.880476926983933 26.289504327862673 40.13051111331942 20.699507631833978 35 13.038456017686864 25.85854416322468 38.11050212719695 22.99249769189151 36 15.606890266534506 26.511609339791793 39.3904725018707 18.491027891803007 37 14.378900108801728 27.566417042716356 39.52390537901817 18.530777469463747 38 14.778179520304136 27.15686049681876 37.17868029703467 20.88627968584244 39 17.331410405046498 26.39974995137472 37.04677624979722 19.222063393781568 40 16.832672114397244 27.186927485049317 36.53691147480276 19.443488925750678 41 16.69371846257467 27.049757468121772 34.14437760060338 22.112146468700182 42 17.97734104203348 25.50079796427804 36.11784220946498 20.404018784223492 43 18.210572538307808 24.38865913972741 37.416498283039076 19.984270038925708 44 16.34667407299823 25.232912990043072 36.0970331356896 22.3233798012691 45 16.77483138280117 24.131900649837647 36.070873157229116 23.022394810132067 46 17.22609101124454 25.676443533941296 36.59381792145381 20.503647533360343 47 14.845532971340383 26.14307639647995 38.20758282648375 20.80380780569591 48 15.708302650566388 25.031277311909328 37.34056639750767 21.919853640016612 49 17.65051118126742 23.402309042774114 37.928911107883586 21.01826866807489 50 16.15692929416471 23.505080386726018 36.883870929384194 23.454119389725072 51 15.889384059909748 23.587382396882546 34.500085359669974 26.02314818353773 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5812.0 1 6249.0 2 6686.0 3 48704.0 4 90722.0 5 59476.5 6 28231.0 7 28103.0 8 27975.0 9 29177.5 10 30380.0 11 31195.0 12 32010.0 13 31744.0 14 31478.0 15 30129.5 16 28781.0 17 26521.0 18 24261.0 19 22490.0 20 20719.0 21 19330.5 22 17942.0 23 17048.0 24 16154.0 25 16220.5 26 16297.5 27 16308.0 28 16373.5 29 16439.0 30 17996.0 31 19553.0 32 21032.0 33 22511.0 34 24578.5 35 26646.0 36 29229.5 37 31813.0 38 33086.5 39 34360.0 40 37773.5 41 41187.0 42 48439.5 43 55692.0 44 61701.5 45 67711.0 46 82264.5 47 96818.0 48 103357.5 49 109897.0 50 103108.5 51 96320.0 52 78345.0 53 60370.0 54 49226.5 55 38083.0 56 30982.0 57 23881.0 58 19635.5 59 15390.0 60 12861.0 61 10332.0 62 8314.0 63 6296.0 64 5074.5 65 3853.0 66 3294.5 67 2736.0 68 2058.5 69 1381.0 70 1067.0 71 753.0 72 679.0 73 605.0 74 485.0 75 300.0 76 235.0 77 225.5 78 216.0 79 161.0 80 106.0 81 64.0 82 22.0 83 19.0 84 16.0 85 12.5 86 9.0 87 16.0 88 23.0 89 13.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1177371.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.989630411897906 #Duplication Level Percentage of deduplicated Percentage of total 1 77.83181995904927 31.902975344068086 2 9.364995619994597 7.677354185452424 3 3.684630642823419 4.530949447610572 4 2.0678320325380017 3.390386830704654 5 1.2981071593730906 2.6604466348870823 6 0.9323692582262396 2.2930482781265376 7 0.7156560158227369 2.0534132913437744 8 0.5628473102440511 1.8456722580187597 9 0.42501328447582454 1.5679023705729787 >10 2.8488427973587513 21.719634264877673 >50 0.18720526774161617 5.148669318090847 >100 0.07278333993446234 5.049493605564904 >500 0.0036284948947557464 1.1057687476383926 >1k 0.0038419357709178485 3.1440787628673874 >5k 2.1344087616210268E-4 0.5768125131086258 >10k+ 2.1344087616210268E-4 5.333394147067335 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60961 5.177722230291047 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCC 6593 0.5599764220453876 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4287 0.3641163235717544 No Hit GCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 3757 0.3191007762209193 No Hit CCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 3136 0.2663561443249409 No Hit CTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGCT 2907 0.2469060304695801 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCG 2686 0.22813539657423193 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTC 2145 0.18218556427837954 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGT 1961 0.16655752519808964 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTC 1756 0.14914585122276666 No Hit TCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 1718 0.14591832141270678 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCG 1509 0.1281669074573775 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGC 1473 0.12510924763732076 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCT 1459 0.12392015770729872 No Hit CGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG 1379 0.11712535810717267 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1336 0.11347315332210493 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGC 1192 0.10124251404187805 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.493499500157554E-5 0.0 0.0 0.26092030464484006 0.0 2 8.493499500157554E-5 0.0 0.0 1.1453484075962461 0.0 3 8.493499500157554E-5 0.0 0.0 1.6411139734204427 0.0 4 8.493499500157554E-5 0.0 0.0 2.328068212993186 0.0 5 8.493499500157554E-5 0.0 0.0 4.085458194570785 0.0 6 8.493499500157554E-5 0.0 0.0 5.16710535591585 0.0 7 8.493499500157554E-5 0.0 0.0 6.28518963011659 0.0 8 8.493499500157554E-5 0.0 0.0 7.9085521895817035 0.0 9 8.493499500157554E-5 0.0 0.0 8.634576526855172 0.0 10 8.493499500157554E-5 0.0 0.0 10.39510910324783 0.0 11 8.493499500157554E-5 0.0 0.0 13.060624051382275 0.0 12 8.493499500157554E-5 0.0 0.0 14.812323388294768 0.0 13 8.493499500157554E-5 0.0 0.0 15.498937887887505 0.0 14 8.493499500157554E-5 0.0 0.0 15.784998951052811 0.0 15 8.493499500157554E-5 0.0 0.0 16.241694419176284 0.0 16 8.493499500157554E-5 0.0 0.0 17.172836769378556 0.0 17 8.493499500157554E-5 0.0 0.0 18.470983232982636 0.0 18 8.493499500157554E-5 0.0 0.0 19.755540097386465 0.0 19 8.493499500157554E-5 0.0 0.0 20.648037024863022 0.0 20 8.493499500157554E-5 0.0 0.0 21.39189771108682 0.0 21 8.493499500157554E-5 0.0 0.0 22.29976787265866 0.0 22 8.493499500157554E-5 0.0 0.0 23.23762008746606 0.0 23 8.493499500157554E-5 0.0 0.0 24.15364400855805 0.0 24 8.493499500157554E-5 0.0 0.0 24.775962716934593 0.0 25 8.493499500157554E-5 0.0 0.0 25.265018418153666 0.0 26 8.493499500157554E-5 0.0 0.0 25.689353653181538 0.0 27 8.493499500157554E-5 0.0 0.0 26.083452029988848 0.0 28 8.493499500157554E-5 0.0 0.0 26.477975081771167 0.0 29 8.493499500157554E-5 0.0 0.0 26.873942028468512 0.0 30 8.493499500157554E-5 0.0 0.0 27.293690773766297 0.0 31 8.493499500157554E-5 0.0 0.0 27.664432026948177 0.0 32 8.493499500157554E-5 0.0 0.0 27.98650552799415 0.0 33 8.493499500157554E-5 0.0 0.0 28.289043980189764 0.0 34 8.493499500157554E-5 0.0 0.0 28.586911007660287 0.0 35 8.493499500157554E-5 0.0 0.0 28.89284685965596 0.0 36 8.493499500157554E-5 0.0 0.0 29.186891812351416 0.0 37 1.6986999000315108E-4 0.0 0.0 29.46802664580663 0.0 38 1.6986999000315108E-4 0.0 0.0 29.759098873677033 0.0 39 1.6986999000315108E-4 0.0 0.0 30.04583941680235 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTACG 35 1.2119563E-7 45.0 1 CGTTGTT 105 0.0 45.0 1 CGTTGCC 20 7.033357E-4 45.0 28 CGTTGAT 20 7.033357E-4 45.0 25 GCGTTAG 70 0.0 45.0 1 CCGTCGA 20 7.033357E-4 45.0 41 TCGCTCG 20 7.033357E-4 45.0 30 TTGAACG 50 2.1827873E-11 45.0 1 GTCCGAC 20 7.033357E-4 45.0 22 AACTGCG 25 3.8908638E-5 45.0 1 ACGCTAG 20 7.033357E-4 45.0 1 CCGACTA 25 3.8908638E-5 45.0 14 CCGACCA 20 7.033357E-4 45.0 15 CATAACG 20 7.033357E-4 45.0 1 GTATACG 45 3.8562575E-10 45.0 1 CGTCGAA 20 7.033357E-4 45.0 42 ACGTACG 20 7.033357E-4 45.0 1 GCGGACC 25 3.8908638E-5 45.0 5 GGACCGC 20 7.033357E-4 45.0 18 TAAATCG 20 7.033357E-4 45.0 39 >>END_MODULE