##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935252.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 600533 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.598148644620697 31.0 31.0 34.0 30.0 34.0 2 31.713499507937115 31.0 31.0 34.0 30.0 34.0 3 31.72372209354024 31.0 31.0 34.0 30.0 34.0 4 35.532979869549216 37.0 35.0 37.0 33.0 37.0 5 33.224207495674676 37.0 35.0 37.0 30.0 37.0 6 34.11600861234936 37.0 35.0 37.0 28.0 37.0 7 35.36301918462433 37.0 35.0 37.0 32.0 37.0 8 35.22592596909745 37.0 35.0 37.0 32.0 37.0 9 37.29205389212583 39.0 37.0 39.0 34.0 39.0 10 36.78185212136552 39.0 37.0 39.0 32.0 39.0 11 36.62970894188995 39.0 35.0 39.0 32.0 39.0 12 37.006660749700686 39.0 37.0 39.0 33.0 39.0 13 36.99423012557178 39.0 37.0 39.0 33.0 39.0 14 37.97779972124763 40.0 37.0 41.0 33.0 41.0 15 38.05544907607076 40.0 37.0 41.0 33.0 41.0 16 38.10146653056535 40.0 37.0 41.0 33.0 41.0 17 38.00711534586775 40.0 37.0 41.0 33.0 41.0 18 37.902301788577816 39.0 37.0 40.0 33.0 41.0 19 37.633004347804366 39.0 37.0 40.0 33.0 41.0 20 37.31708831987584 39.0 35.0 40.0 33.0 41.0 21 37.30143722326667 39.0 35.0 40.0 33.0 41.0 22 37.26678134257401 39.0 35.0 40.0 33.0 41.0 23 36.946329344099325 39.0 35.0 40.0 32.0 41.0 24 36.679984280630705 38.0 35.0 40.0 31.0 41.0 25 36.49957454461287 38.0 35.0 40.0 31.0 41.0 26 36.78759368760751 38.0 35.0 40.0 32.0 41.0 27 36.664861048435306 38.0 35.0 40.0 32.0 41.0 28 36.676988608452824 38.0 35.0 40.0 31.0 41.0 29 36.74583411735908 39.0 35.0 40.0 32.0 41.0 30 36.4318330549695 38.0 35.0 40.0 31.0 41.0 31 36.19660368372762 38.0 35.0 40.0 30.0 41.0 32 35.79874877816873 38.0 35.0 40.0 29.0 41.0 33 35.542742863422994 38.0 35.0 40.0 27.0 41.0 34 35.30103757828462 38.0 35.0 40.0 25.0 41.0 35 35.0978114441671 38.0 35.0 40.0 23.0 41.0 36 34.79930994633101 38.0 35.0 40.0 22.0 41.0 37 34.52090559552931 38.0 34.0 40.0 21.0 41.0 38 34.31390781189377 38.0 34.0 40.0 21.0 41.0 39 34.24862413888995 38.0 33.0 40.0 20.0 41.0 40 34.28115690561551 38.0 34.0 40.0 20.0 41.0 41 34.231172974674166 38.0 34.0 40.0 19.0 41.0 42 34.20907760272957 38.0 34.0 40.0 18.0 41.0 43 33.936396501108185 38.0 33.0 40.0 18.0 41.0 44 33.7548327902047 37.0 33.0 40.0 18.0 41.0 45 33.74202083815544 37.0 33.0 40.0 18.0 41.0 46 33.68642855596612 37.0 33.0 40.0 18.0 41.0 47 33.56319136500409 37.0 33.0 40.0 18.0 41.0 48 33.48087115945335 37.0 33.0 40.0 17.0 41.0 49 33.40840220270993 36.0 33.0 40.0 17.0 41.0 50 33.20414864795107 36.0 33.0 39.0 15.0 41.0 51 32.26957053151117 35.0 31.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 11.0 11 17.0 12 17.0 13 17.0 14 43.0 15 48.0 16 92.0 17 168.0 18 316.0 19 676.0 20 1430.0 21 2267.0 22 3280.0 23 4795.0 24 6628.0 25 9276.0 26 11726.0 27 12400.0 28 12422.0 29 12057.0 30 13152.0 31 15597.0 32 19049.0 33 25124.0 34 36309.0 35 53454.0 36 69785.0 37 90021.0 38 120146.0 39 80188.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.558970114881284 19.612244456174764 20.252342502410357 19.576442926533595 2 37.31002292963084 26.771384753210896 21.98213919967762 13.936453117480637 3 23.928410262217064 26.957552707344973 36.875075974176276 12.238961056261688 4 22.016109023151103 22.90098962088678 40.714165582907185 14.368735773054937 5 20.430018000676068 30.60997480571426 33.76717016383779 15.192837029771885 6 19.11735075341405 33.763173714017384 34.70433764672383 12.415137885844741 7 60.753863651123254 7.534640061412112 26.70694199985679 5.004554287607841 8 59.26951558032615 10.649872696421346 22.729475316094202 7.351136407158308 9 54.60782338356094 8.747895619391441 24.92635708612183 11.717923910925794 10 29.121963322581774 23.696283135148278 32.239194182501215 14.94255935976874 11 19.045414656646678 24.203166187370222 36.933024496572216 19.81839465941089 12 16.664196638652665 20.44683639367029 42.16287864280564 20.726088324871405 13 19.294693214194723 22.80624045639457 44.133294923010055 13.765771406400647 14 15.690395032412873 26.701113843868697 39.215996456481165 18.392494667237273 15 11.76005315278261 25.415422632894447 44.207728800915184 18.616795413407754 16 12.796132768723783 25.442232150439693 38.03721027820286 23.72442480263366 17 12.447276003150535 26.49396452817747 39.27078112276927 21.787978345902722 18 12.644434194290739 24.465932763062145 43.21627620796859 19.673356834678525 19 12.298741284825313 27.554189361783614 40.20095481846959 19.946114534921477 20 13.304681008370897 28.887671451860264 42.29009896208868 15.51754857768016 21 13.494512374840351 30.70056100164354 40.073234942959004 15.731691680557105 22 11.077992383432719 27.916534145500748 37.816572944367756 23.188900526698784 23 11.524262613378449 29.331277381925723 36.877407236571514 22.267052768124316 24 14.38322290365392 27.34054581513422 35.78870769799495 22.48752358321691 25 11.227692732955557 32.27982475567537 34.13634221599812 22.356140295370945 26 13.462041220049523 28.604922627066287 37.86852679203307 20.06450936085111 27 16.85436104260715 28.39843938634513 36.01434059410557 18.73285897694215 28 11.634664539667263 29.24701889821209 37.68202580041397 21.436290761706683 29 17.39088443099713 27.085772139083115 35.011398207925296 20.511945221994463 30 19.18429128790591 31.858865374592238 32.475484278132924 16.481359059368927 31 16.582435936076788 33.72753870311873 30.157376863552877 19.53264849725161 32 20.14327272606168 33.936353206235125 27.403323381063156 18.517050686640037 33 19.796247666656118 30.656267016134002 28.179467239935192 21.368018077274687 34 19.984913401927955 28.212437950953568 31.2905369063815 20.51211174073698 35 24.982806939835115 27.627957164718676 27.319231416092038 20.07000447935417 36 27.09726193231679 31.007788081587524 26.785705365067365 15.10924462102832 37 21.228808408530423 33.573508866290446 30.781988666734385 14.415694058444748 38 18.471258032447842 38.22221260113932 25.363801822714155 17.94272754369868 39 20.322280374267525 33.25778933047809 30.55519013942614 15.864740155828239 40 23.132117635500464 28.03426289646031 32.374573920167585 16.45904554787164 41 26.058684535237862 26.558240762789055 28.52532666814313 18.857748033829946 42 28.211938394726015 24.82927665923438 30.101926122294692 16.856858823744908 43 26.311293467636247 26.70194643758128 29.20988521863078 17.776874876151684 44 20.54724719540808 27.761338677474846 29.785207474027235 21.90620665308984 45 21.076776796612343 26.183740110868182 29.892112506723194 22.847370585796284 46 24.605975025518998 27.966656286998383 31.57228661872037 15.85508206876225 47 18.853252027781984 27.97115229304634 37.05558229106477 16.120013388106898 48 20.92541125966433 26.54924875069313 32.91209642101266 19.61324356862987 49 22.506506719863854 23.115798798733792 35.62851666769353 18.749177813708823 50 21.56251196853462 21.872403348358873 32.51678092627716 24.048303756829352 51 19.820226365578577 21.507227746018952 29.504290355400954 29.16825553300152 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4912.0 1 5864.0 2 6816.0 3 17164.0 4 27512.0 5 17419.0 6 7326.0 7 7387.5 8 7449.0 9 7853.5 10 8258.0 11 8779.0 12 9300.0 13 9151.5 14 9003.0 15 8644.5 16 8286.0 17 7717.0 18 7148.0 19 7058.5 20 6969.0 21 6959.0 22 6949.0 23 6863.0 24 6777.0 25 7065.0 26 7611.5 27 7870.0 28 7975.5 29 8081.0 30 8914.5 31 9748.0 32 9611.5 33 9475.0 34 10033.5 35 10592.0 36 11227.0 37 11862.0 38 12771.0 39 13680.0 40 15618.5 41 17557.0 42 22502.0 43 27447.0 44 31875.5 45 36304.0 46 54982.0 47 73660.0 48 74819.0 49 75978.0 50 75291.0 51 74604.0 52 57531.5 53 40459.0 54 30759.0 55 21059.0 56 16464.0 57 11869.0 58 9786.5 59 7704.0 60 6885.0 61 6066.0 62 5183.0 63 4300.0 64 3614.0 65 2928.0 66 2492.0 67 2056.0 68 1645.0 69 1234.0 70 1008.5 71 783.0 72 607.0 73 431.0 74 395.5 75 251.5 76 143.0 77 132.5 78 122.0 79 84.5 80 47.0 81 37.5 82 28.0 83 17.0 84 6.0 85 5.0 86 4.0 87 8.5 88 13.0 89 7.5 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 600533.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.66678715700461 #Duplication Level Percentage of deduplicated Percentage of total 1 75.33686821096869 30.63708384610771 2 10.514569622993745 8.551875298115858 3 4.358230399592853 5.317056841242892 4 2.245412113928253 3.6525478606752024 5 1.441370471567268 2.9307953090808727 6 0.9571766273778171 2.3355178906339926 7 0.7673460384282175 2.18438486143717 8 0.5967427143531808 1.9414087161675204 9 0.5040296098632154 1.844753837862191 >10 3.117315180150319 21.36743516518228 >50 0.09622724144277073 2.649733497040326 >100 0.05252578679680399 3.7283558250965507 >500 0.003781856649369888 1.0875083174862246 >1k 0.006723300709990912 5.684982197695116 >5k 0.0012606188831232959 2.999704746252857 >10k+ 4.20206294374432E-4 3.0868557899231868 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18064 3.0079945648282442 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGC 6509 1.0838704950435696 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCG 5854 0.9748007186948926 No Hit GCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGC 5191 0.8643987924060792 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTC 4676 0.7786416400097913 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCC 4651 0.7744786714468647 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3776 0.6287747717444337 No Hit CCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGC 3717 0.618950165935927 No Hit CTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGCT 2550 0.4246227934185132 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGAAATGGT 1809 0.3012324052133688 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCG 1675 0.2789188937160822 No Hit TCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGC 1432 0.23845483928443567 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCT 1425 0.23728920808681622 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGC 1172 0.19515996622999904 No Hit GAACTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCT 1095 0.1823380230561851 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGAAATGGTCGTA 1090 0.18150542934359976 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1089 0.1813389106010827 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1057 0.17601031084053664 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1049 0.17467816090040014 No Hit ACTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGC 1005 0.16735133622964934 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 980 0.16318836766672273 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGT 872 0.14520434347487982 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTC 735 0.12239127575004204 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTC 726 0.12089260706738847 No Hit CGCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTG 686 0.11423185736670592 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 686 0.11423185736670592 No Hit GCCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTG 602 0.10024428299527254 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.66518742517064E-4 0.0 0.0 0.4505997172511752 0.0 2 1.66518742517064E-4 0.0 0.0 2.492286019252897 0.0 3 1.66518742517064E-4 0.0 0.0 3.1933299252497367 0.0 4 1.66518742517064E-4 0.0 0.0 4.243397115562342 0.0 5 1.66518742517064E-4 0.0 0.0 7.326824670750816 0.0 6 1.66518742517064E-4 0.0 0.0 8.777868993044512 0.0 7 1.66518742517064E-4 0.0 0.0 10.448551536718215 0.0 8 1.66518742517064E-4 0.0 0.0 12.752504858184313 0.0 9 1.66518742517064E-4 0.0 0.0 13.764106218975476 0.0 10 3.33037485034128E-4 0.0 0.0 17.771712795133656 0.0 11 3.33037485034128E-4 0.0 0.0 22.704830542201677 0.0 12 3.33037485034128E-4 0.0 0.0 27.196507102856962 0.0 13 3.33037485034128E-4 0.0 0.0 28.617578051497585 0.0 14 3.33037485034128E-4 0.0 0.0 29.16975420168417 0.0 15 3.33037485034128E-4 0.0 0.0 30.31840048756688 0.0 16 3.33037485034128E-4 0.0 0.0 32.221376677051886 0.0 17 3.33037485034128E-4 0.0 0.0 34.60975500097413 0.0 18 3.33037485034128E-4 0.0 0.0 36.89589081699091 0.0 19 3.33037485034128E-4 0.0 0.0 38.67547661827077 0.0 20 3.33037485034128E-4 0.0 0.0 39.93702261158005 0.0 21 3.33037485034128E-4 0.0 0.0 41.363921716208765 0.0 22 3.33037485034128E-4 0.0 0.0 42.749024616465704 0.0 23 3.33037485034128E-4 0.0 0.0 44.02222692175118 0.0 24 3.33037485034128E-4 0.0 0.0 44.90910574439706 0.0 25 3.33037485034128E-4 0.0 0.0 45.56419047745919 0.0 26 3.33037485034128E-4 0.0 0.0 46.14550740758626 0.0 27 3.33037485034128E-4 0.0 0.0 46.662048546874196 0.0 28 3.33037485034128E-4 0.0 0.0 47.123638501131495 0.0 29 3.33037485034128E-4 0.0 0.0 47.58273067425104 0.0 30 3.33037485034128E-4 0.0 0.0 48.0389920287478 0.0 31 3.33037485034128E-4 0.0 0.0 48.43380796725575 0.0 32 3.33037485034128E-4 0.0 0.0 48.78516251396676 0.0 33 3.33037485034128E-4 0.0 0.0 49.10654368702469 0.0 34 3.33037485034128E-4 0.0 0.0 49.40244749247751 0.0 35 3.33037485034128E-4 0.0 0.0 49.72266303433783 0.0 36 3.33037485034128E-4 0.0 0.0 50.026892776916505 0.0 37 3.33037485034128E-4 0.0 0.0 50.314470645243475 0.0 38 3.33037485034128E-4 0.0 0.0 50.57024343374969 0.0 39 3.33037485034128E-4 0.0 0.0 50.83350956566916 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGGT 25 3.888572E-5 45.000004 38 TTCGTAG 25 3.888572E-5 45.000004 1 CTAACGG 25 3.888572E-5 45.000004 2 CATACTC 25 3.888572E-5 45.000004 10 GCAATTG 25 3.888572E-5 45.000004 1 GCGCTAG 25 3.888572E-5 45.000004 1 TCGAAGG 25 3.888572E-5 45.000004 2 GCGTAAG 25 3.888572E-5 45.000004 1 AGTAACG 25 3.888572E-5 45.000004 1 CGAACGA 20 7.030592E-4 45.0 3 GCGACCG 20 7.030592E-4 45.0 33 GAGTACG 20 7.030592E-4 45.0 1 CAATTGT 40 6.8048394E-9 45.0 26 TACGGGT 70 0.0 45.0 4 CGCGAGG 20 7.030592E-4 45.0 2 ATCGTAG 20 7.030592E-4 45.0 1 ACTAGCG 20 7.030592E-4 45.0 1 TCTACGG 55 1.8189894E-12 45.0 2 TATTACG 20 7.030592E-4 45.0 1 GCCTACC 35 1.2106284E-7 45.0 14 >>END_MODULE