##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935250.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 637210 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.6070400652846 31.0 31.0 34.0 30.0 34.0 2 31.744100061204314 31.0 31.0 34.0 30.0 34.0 3 31.765305001490873 31.0 31.0 34.0 30.0 34.0 4 35.56197328981027 37.0 35.0 37.0 33.0 37.0 5 33.00632130694748 37.0 35.0 37.0 28.0 37.0 6 34.01952260636211 37.0 35.0 37.0 28.0 37.0 7 35.28094348801808 37.0 35.0 37.0 32.0 37.0 8 35.12149683777719 37.0 35.0 37.0 32.0 37.0 9 37.186684138667005 39.0 37.0 39.0 34.0 39.0 10 36.86915302647479 39.0 37.0 39.0 32.0 39.0 11 36.679579730387154 39.0 37.0 39.0 32.0 39.0 12 36.993187489210776 39.0 37.0 39.0 33.0 39.0 13 36.944779586007755 39.0 37.0 39.0 33.0 39.0 14 37.956505704555795 40.0 37.0 41.0 33.0 41.0 15 38.015845639585066 40.0 37.0 41.0 33.0 41.0 16 38.05119034541203 40.0 37.0 41.0 33.0 41.0 17 37.88835391786068 40.0 37.0 41.0 33.0 41.0 18 37.69832394344094 39.0 37.0 40.0 33.0 41.0 19 37.465162191428256 39.0 36.0 40.0 33.0 41.0 20 37.03050799579417 39.0 35.0 40.0 32.0 41.0 21 37.017692754350996 39.0 35.0 40.0 32.0 41.0 22 37.02615464289638 39.0 35.0 40.0 32.0 41.0 23 36.632596789127604 38.0 35.0 40.0 31.0 41.0 24 36.38220209977872 38.0 35.0 40.0 31.0 41.0 25 36.261246684766405 38.0 35.0 40.0 31.0 41.0 26 36.507623860265845 38.0 35.0 40.0 31.0 41.0 27 36.389058552125675 38.0 35.0 40.0 31.0 41.0 28 36.372735832770985 38.0 35.0 40.0 31.0 41.0 29 36.47367743757945 38.0 35.0 40.0 31.0 41.0 30 36.18646756956105 38.0 35.0 40.0 31.0 41.0 31 36.050072974372654 38.0 35.0 40.0 30.0 41.0 32 35.72247610677798 38.0 35.0 40.0 29.0 41.0 33 35.45150578302287 38.0 35.0 40.0 26.0 41.0 34 35.20686900707773 38.0 35.0 40.0 24.0 41.0 35 34.920326109132 38.0 35.0 40.0 22.0 41.0 36 34.70377583528193 38.0 35.0 40.0 21.0 41.0 37 34.57096090770703 38.0 35.0 40.0 20.0 41.0 38 34.437052149212974 38.0 34.0 40.0 20.0 41.0 39 34.312667723356505 38.0 34.0 40.0 18.0 41.0 40 34.22443778346228 38.0 34.0 40.0 18.0 41.0 41 33.994199714379874 38.0 33.0 40.0 18.0 41.0 42 34.12624409535318 38.0 34.0 40.0 18.0 41.0 43 34.0172360760189 38.0 34.0 40.0 17.0 41.0 44 33.987465670658025 38.0 34.0 40.0 16.0 41.0 45 33.973522072786054 38.0 34.0 40.0 18.0 41.0 46 33.87479323927747 38.0 33.0 40.0 17.0 41.0 47 33.728593399350295 37.0 33.0 40.0 16.0 41.0 48 33.6664239418716 37.0 33.0 40.0 17.0 41.0 49 33.70890130412266 37.0 33.0 40.0 17.0 41.0 50 33.61479104219959 37.0 33.0 40.0 15.0 41.0 51 32.669019632460255 36.0 31.0 40.0 13.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 17.0 10 18.0 11 22.0 12 22.0 13 28.0 14 54.0 15 67.0 16 116.0 17 196.0 18 431.0 19 917.0 20 1662.0 21 2808.0 22 4258.0 23 5895.0 24 7779.0 25 10042.0 26 12848.0 27 13487.0 28 13518.0 29 13213.0 30 14117.0 31 16613.0 32 20293.0 33 26373.0 34 38417.0 35 56286.0 36 71070.0 37 82768.0 38 120874.0 39 102981.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.51629760989313 18.23449098413396 19.476153858225704 20.77305754774721 2 36.23781798779052 27.591688768223975 19.21407385320381 16.956419390781686 3 22.359818584140235 27.433656094537124 38.51822789975047 11.688297421572166 4 20.051788264465404 20.20778079440059 41.94362925880008 17.796801682333925 5 21.578914329655845 31.96638470833791 31.932957737637512 14.521743224368732 6 17.801980508780467 36.1802231603396 35.36055617457353 10.657240156306399 7 53.369532807080866 7.637042733164891 30.153010781375055 8.840413678379184 8 51.15111187834466 12.524913293890554 29.77071922913953 6.553255598625257 9 46.0137160433766 9.274807363349602 30.80773999152556 13.903736601748246 10 31.970778864110734 22.320585050454326 33.141664443433086 12.566971642001851 11 20.620988371180616 24.289951507352363 37.82175420975816 17.267305911708856 12 16.48075202837369 18.495943252616875 41.75656377018565 23.266740948823777 13 19.634971202586275 19.227256320522276 44.58043659076286 16.55733588612859 14 14.782881624582162 25.831986315343453 39.922003735032405 19.463128325041982 15 12.674942326705482 21.64937775615574 47.155098005367144 18.52058191177163 16 15.279735095180552 23.647149291442382 39.68393465262629 21.38918096075077 17 13.298441644041995 25.333406569262877 39.1884935892406 22.179658197454525 18 13.048288633260622 25.400417444798418 42.35055947019036 19.200734451750602 19 12.968879961080335 24.943425244424915 40.26333547809984 21.824359316394908 20 15.109932361387926 26.26465372483169 43.99114891480046 14.63426499897993 21 14.316316441989297 29.96986864612922 40.75924734388977 14.954567567991713 22 15.07870246857394 23.517050893739896 40.62036063464164 20.783886003044522 23 13.9481489618807 27.275466486715526 40.01443794039641 18.76194661100736 24 15.672070432039673 27.241882581880382 36.72949263194237 20.356554354137568 25 12.533230803031966 30.953061000298177 35.64350841951633 20.870199777153527 26 12.646380314182137 24.93620627422671 41.05396964893834 21.363443762652814 27 16.887368371494485 23.682616405894446 39.63889455595487 19.791120666656205 28 12.743836411857941 26.456427237488427 39.36598609563566 21.43375025501797 29 13.450353886473849 23.51579542066195 39.924043878784076 23.10980681408013 30 14.34786020307277 29.409142982690167 38.587121984902936 17.655874829334127 31 16.268420144065534 28.086972897474933 33.66629525588111 21.97831170257843 32 16.46301847114766 27.742502471712623 35.12970606236562 20.664772994774093 33 16.695124056433514 27.03676966777044 33.72294847852356 22.545157797272488 34 18.56923149354216 24.923651543447214 33.270350433922886 23.236766529087742 35 17.855181180458562 24.39603898243907 33.824641797837444 23.924138039264918 36 18.43709295208801 27.618210636995656 32.7300262080005 21.214670202915837 37 17.101269597150075 26.48247830385587 37.11131338177367 19.30493871722038 38 15.754460852780088 29.504872804883792 32.266756642237254 22.47390970009887 39 21.27760079094804 26.627328510224256 32.8609092763767 19.234161422450995 40 18.974749297719747 23.205379702139012 36.22824500557116 21.59162599457008 41 20.102321055852858 26.809529040661634 29.381522574975282 23.706627328510223 42 19.64250404105397 21.135418464870295 35.41705246308125 23.805025030994493 43 20.616123413003564 23.797806060796283 33.19408044443747 22.391990081762682 44 19.89202931529637 23.03965725584972 33.93904678206557 23.129266646788345 45 18.236060325481397 22.21763625806249 33.930729272924154 25.615574143531962 46 22.18828957486543 23.565857409645172 33.6418135308611 20.604039484628302 47 16.30043470755324 23.546240642802214 40.35200326423 19.801321385414543 48 17.553867641750756 23.760455736727295 34.97120258627454 23.714474035247406 49 18.98008505830103 21.391378038637185 38.00018832096169 21.62834858210009 50 18.642205866197955 19.7702484267353 37.77090755010122 23.81663815696552 51 18.194786648043817 20.593681831735218 32.92619387643006 28.285337643790903 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5054.0 1 7646.0 2 10238.0 3 24139.5 4 38041.0 5 23382.5 6 8724.0 7 8755.0 8 8786.0 9 9289.0 10 9792.0 11 9889.0 12 9986.0 13 9616.5 14 9247.0 15 8828.5 16 8410.0 17 7484.5 18 6559.0 19 6170.0 20 5781.0 21 6695.0 22 7609.0 23 6850.0 24 6091.0 25 6478.5 26 6902.0 27 6938.0 28 7387.0 29 7836.0 30 11060.0 31 14284.0 32 12242.0 33 10200.0 34 10823.5 35 11447.0 36 12135.5 37 12824.0 38 15141.0 39 17458.0 40 18551.0 41 19644.0 42 23065.0 43 26486.0 44 31060.5 45 35635.0 46 58337.0 47 81039.0 48 73851.5 49 66664.0 50 62410.0 51 58156.0 52 45788.5 53 33421.0 54 27465.5 55 21510.0 56 18679.0 57 15848.0 58 14073.5 59 12299.0 60 11435.5 61 10572.0 62 10015.0 63 9458.0 64 9055.0 65 8652.0 66 7570.0 67 6488.0 68 5264.5 69 4041.0 70 3074.0 71 2107.0 72 1713.0 73 1319.0 74 1043.5 75 608.0 76 448.0 77 356.0 78 264.0 79 187.5 80 111.0 81 91.5 82 72.0 83 46.0 84 20.0 85 14.5 86 9.0 87 5.5 88 2.0 89 2.5 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 637210.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.229478933532334 #Duplication Level Percentage of deduplicated Percentage of total 1 74.79609630115499 27.846196915543054 2 9.905797680007916 7.375753720953764 3 4.009681707895667 4.47835082022815 4 2.2952198699345896 3.4179935918221847 5 1.611120787592845 2.999059371053192 6 1.2554986871324432 2.8044937154204876 7 1.0350392998825197 2.697378166724803 8 0.8344303498850328 2.4852325706035874 9 0.6838091577804961 2.291207277073092 >10 3.422271615872467 19.195674071808252 >50 0.08152432711875093 2.186555857913147 >100 0.051489048697977755 3.4499595892427175 >500 0.004290754058164812 1.1151626565033759 >1k 0.011585035957044994 8.753571587318723 >5k 0.0017163016232659251 4.672628973697214 >10k+ 4.290754058164813E-4 4.230781114094243 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26485 4.15640055868552 No Hit GAATCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTC 9473 1.4866370584265785 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCG 7456 1.1701009086486402 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGC 7215 1.1322797821754211 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 5107 0.8014626261358108 No Hit GCTCAACTTGACCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATG 4633 0.7270758462673216 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCC 4324 0.6785831986315344 No Hit GCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC 3492 0.5480139985248191 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3236 0.5078388600304452 No Hit GCTCAACTTGACCCCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTA 3089 0.48476954222312896 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 2534 0.39767109744040424 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTATAGCGT 2375 0.3727185700161642 No Hit CCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC 2242 0.351846330095259 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCT 2048 0.32140110795499127 No Hit GAACTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCT 2025 0.3177916228558874 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1970 0.3091602454449867 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1785 0.28012743051741185 No Hit GCTCAACTTGACCCTGCATTAGAACTGTCTCTTATACACATCTGACGCCTA 1707 0.2678865680074073 No Hit TGGTATAGAAAAGATTTTCTTTCCTTTTTACTTAATGTATATAGTTTAACT 1689 0.26506175358202166 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1677 0.2631785439650979 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1673 0.26255080742612324 No Hit GCTCAACCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTC 1612 0.2529778252067607 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTT 1578 0.24764206462547667 No Hit CTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGCT 1548 0.24293404058316725 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTC 1513 0.23744134586713958 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCG 1305 0.20479904584046077 No Hit GCTCAACTTGACCCTGCATCTGTCTCTTATACACATCTGACGCCTATAGCG 1288 0.20213116554981875 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1197 0.18785015928814677 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTATAGCGTCGTA 1184 0.18581001553647933 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGC 1032 0.16195602705544485 No Hit GCTCCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTC 1023 0.16054361984275198 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1019 0.1599158833037774 No Hit TCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC 930 0.14594874531159271 No Hit GCTCAACTTCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCG 814 0.12774438568132956 No Hit GCCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTG 758 0.11895607413568525 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACCTGTCTCTTATACACATC 747 0.11722979865350512 No Hit ACTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC 674 0.1057736068172188 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGT 668 0.10483200200875693 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.708024042309443E-4 0.0 0.0 0.2614522684829177 0.0 2 4.708024042309443E-4 0.0 0.0 1.4883633339087585 0.0 3 4.708024042309443E-4 0.0 0.0 2.089734938246418 0.0 4 4.708024042309443E-4 0.0 0.0 3.0850112207906344 0.0 5 4.708024042309443E-4 0.0 0.0 6.5634563173835945 0.0 6 4.708024042309443E-4 0.0 0.0 7.920308846377176 0.0 7 4.708024042309443E-4 0.0 0.0 9.372891197564382 0.0 8 4.708024042309443E-4 0.0 0.0 11.422450997316426 0.0 9 4.708024042309443E-4 0.0 0.0 12.16255237676747 0.0 10 4.708024042309443E-4 0.0 0.0 15.13551262535114 0.0 11 4.708024042309443E-4 0.0 0.0 18.057940082547354 0.0 12 4.708024042309443E-4 0.0 0.0 21.262378179877906 0.0 13 4.708024042309443E-4 0.0 0.0 22.87016839032658 0.0 14 4.708024042309443E-4 0.0 0.0 23.233470912258124 0.0 15 4.708024042309443E-4 0.0 0.0 24.550776039296306 0.0 16 4.708024042309443E-4 0.0 0.0 25.75838420614868 0.0 17 4.708024042309443E-4 0.0 0.0 27.177853454904977 0.0 18 4.708024042309443E-4 0.0 0.0 28.553067277663565 0.0 19 4.708024042309443E-4 0.0 0.0 29.99011314951115 0.0 20 4.708024042309443E-4 0.0 0.0 31.11407542254516 0.0 21 4.708024042309443E-4 0.0 0.0 32.11437359740117 0.0 22 4.708024042309443E-4 0.0 0.0 33.15045275497874 0.0 23 4.708024042309443E-4 0.0 0.0 34.0653787605342 0.0 24 4.708024042309443E-4 0.0 0.0 34.73689992310227 0.0 25 4.708024042309443E-4 0.0 0.0 35.531457447309364 0.0 26 4.708024042309443E-4 0.0 0.0 36.0137160433766 0.0 27 4.708024042309443E-4 0.0 0.0 36.48404764520331 0.0 28 4.708024042309443E-4 0.0 0.0 36.884229688799614 0.0 29 4.708024042309443E-4 0.0 0.0 37.29351391221105 0.0 30 4.708024042309443E-4 0.0 0.0 37.718020746692616 0.0 31 4.708024042309443E-4 0.0 0.0 38.08414808304954 0.0 32 4.708024042309443E-4 0.0 0.0 38.532351971877404 0.0 33 4.708024042309443E-4 0.0 0.0 38.86458153512971 0.0 34 4.708024042309443E-4 0.0 0.0 39.306664992702565 0.0 35 6.277365389745923E-4 0.0 0.0 39.65741278385462 0.0 36 6.277365389745923E-4 0.0 0.0 39.94774093313036 0.0 37 6.277365389745923E-4 0.0 0.0 40.26270774156087 0.0 38 6.277365389745923E-4 0.0 0.0 40.585992059132785 0.0 39 6.277365389745923E-4 0.0 0.0 40.950079251738046 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGCG 30 2.1639735E-6 45.000004 1 CCCGTCG 30 2.1639735E-6 45.000004 40 TCTCACG 30 2.1639735E-6 45.000004 23 GTCGATG 25 3.8888422E-5 45.0 1 TAGACGT 20 7.0309173E-4 45.0 8 CGACCCG 45 3.8380676E-10 45.0 32 GCGTTTA 20 7.0309173E-4 45.0 32 CGTTATT 555 0.0 45.0 1 GTAATAC 20 7.0309173E-4 45.0 26 CACCTAA 20 7.0309173E-4 45.0 31 ACGATTT 20 7.0309173E-4 45.0 18 CGAATGC 80 0.0 45.0 45 TAGTGCG 25 3.8888422E-5 45.0 1 ATCATAC 25 3.8888422E-5 45.0 25 CGTTTAC 20 7.0309173E-4 45.0 33 TCGAATG 85 0.0 45.0 44 GCCCGAA 20 7.0309173E-4 45.0 25 CTTGACC 2445 0.0 44.539875 7 ACTTGAC 2440 0.0 44.538937 6 GCTCAAC 2750 0.0 44.345455 1 >>END_MODULE