##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935248.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 368682 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.64033231890898 31.0 31.0 34.0 30.0 34.0 2 31.74309567594838 31.0 31.0 34.0 30.0 34.0 3 31.752982244861425 31.0 31.0 34.0 30.0 34.0 4 35.58074709370135 37.0 35.0 37.0 33.0 37.0 5 33.13493200101985 37.0 35.0 37.0 28.0 37.0 6 34.08080676572222 37.0 35.0 37.0 28.0 37.0 7 35.32871960117391 37.0 35.0 37.0 32.0 37.0 8 35.20253768830591 37.0 35.0 37.0 32.0 37.0 9 37.27951188286925 39.0 37.0 39.0 34.0 39.0 10 36.751029342360084 39.0 37.0 39.0 32.0 39.0 11 36.587270330528746 39.0 35.0 39.0 32.0 39.0 12 36.988277160262776 39.0 37.0 39.0 33.0 39.0 13 36.96712342886281 39.0 37.0 39.0 33.0 39.0 14 37.928521056086275 40.0 37.0 41.0 33.0 41.0 15 38.0517302173689 40.0 37.0 41.0 33.0 41.0 16 38.07903016691892 40.0 37.0 41.0 33.0 41.0 17 37.986638892053314 40.0 37.0 41.0 33.0 41.0 18 37.883433419586524 39.0 37.0 40.0 33.0 41.0 19 37.6769221171633 39.0 37.0 40.0 33.0 41.0 20 37.4012319559946 39.0 35.0 40.0 33.0 41.0 21 37.41356779012808 39.0 35.0 40.0 33.0 41.0 22 37.400366711691916 39.0 35.0 40.0 33.0 41.0 23 37.094238395148125 39.0 35.0 40.0 32.0 41.0 24 36.82240792878415 39.0 35.0 40.0 32.0 41.0 25 36.61814246423747 38.0 35.0 40.0 31.0 41.0 26 36.86850727727418 39.0 35.0 40.0 32.0 41.0 27 36.766408449558156 39.0 35.0 40.0 32.0 41.0 28 36.85111288318931 39.0 35.0 40.0 32.0 41.0 29 36.88456176325397 39.0 35.0 40.0 32.0 41.0 30 36.57413163647805 38.0 35.0 40.0 31.0 41.0 31 36.436487270873 38.0 35.0 40.0 31.0 41.0 32 36.15276579816753 38.0 35.0 40.0 30.0 41.0 33 35.980324507298974 39.0 35.0 40.0 30.0 41.0 34 35.8112763845265 39.0 35.0 40.0 29.0 41.0 35 35.56279937724109 39.0 35.0 40.0 26.0 41.0 36 35.34449200123684 38.0 35.0 40.0 25.0 41.0 37 35.29527614583842 38.0 35.0 40.0 25.0 41.0 38 35.24482073982456 38.0 35.0 40.0 24.0 41.0 39 35.16601298680163 38.0 35.0 40.0 23.0 41.0 40 35.0743052278115 38.0 35.0 40.0 23.0 41.0 41 34.951850103883565 38.0 35.0 40.0 22.0 41.0 42 35.036210067212394 39.0 35.0 40.0 23.0 41.0 43 34.929882663108046 38.0 35.0 40.0 22.0 41.0 44 34.84302732436083 38.0 35.0 40.0 21.0 41.0 45 34.81647869980091 38.0 35.0 40.0 22.0 41.0 46 34.622731785115626 38.0 34.0 40.0 20.0 41.0 47 34.501961039595095 38.0 34.0 40.0 20.0 41.0 48 34.48157219500816 38.0 34.0 40.0 20.0 41.0 49 34.54244308102918 38.0 34.0 40.0 20.0 41.0 50 34.468042920457194 38.0 34.0 40.0 20.0 41.0 51 33.4961511546536 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 6.0 10 10.0 11 5.0 12 9.0 13 18.0 14 18.0 15 28.0 16 53.0 17 94.0 18 181.0 19 333.0 20 636.0 21 1124.0 22 1746.0 23 2503.0 24 3514.0 25 4903.0 26 6070.0 27 6716.0 28 6406.0 29 6689.0 30 7021.0 31 8434.0 32 10805.0 33 14445.0 34 21518.0 35 31925.0 36 40618.0 37 53535.0 38 78379.0 39 60927.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.03368756814816 22.852756576127938 18.548233979418576 18.565321876305326 2 35.71072089225946 28.37024861533788 21.479486386642147 14.439544105760522 3 24.401787990734565 28.78361297812207 34.14595776305868 12.668641268084691 4 22.56416098426286 25.457440287293657 37.80520882494942 14.173189903494068 5 21.176244026017002 32.99754259768581 30.50487954388877 15.321333832408419 6 20.048442831491638 35.63721581200058 32.044417682447204 12.269923674060571 7 62.157631780233366 8.867804774846617 23.635273758957585 5.339289685962428 8 59.84371355260089 11.160837795173077 21.763742195170906 7.2317064570551315 9 54.53181874894896 10.225072013279737 23.855246526817147 11.387862710954156 10 27.970174839021162 27.29045627397052 31.204127133952834 13.53524175305548 11 18.482865992915304 24.833053959781058 37.27141547458243 19.41266457272121 12 16.711149445863917 21.71763199722254 42.42897673333659 19.14224182357696 13 18.709619672237864 23.964283583142112 43.83750766242996 13.488589082190073 14 15.054979630141965 29.090652649166493 38.22047184294324 17.633895877748305 15 12.494236225256454 27.486831469938867 42.64976321057171 17.36916909423297 16 12.822703576523942 27.745319814908243 37.457483685127016 21.974492923440796 17 13.101534655882304 28.18662153291997 37.151528959916675 21.560314851281053 18 12.764658974400703 26.452335617144314 41.68226276303156 19.100742645423427 19 13.141406415284717 27.8597816004036 39.06211857373021 19.936693410581476 20 14.090734020104046 29.73049945481472 40.078712820262446 16.100053704818787 21 14.159085607651036 29.749486006911102 39.53895226780803 16.552476117629826 22 11.617057518403394 27.103845590508897 37.53722720393184 23.74186968715587 23 12.185840371919433 28.018726165096208 38.06288346054323 21.73255000244113 24 15.605860877395697 26.10271182211228 36.08041618522195 22.21101111527007 25 11.631433050704944 31.900933595890223 34.000575021292065 22.467058332112767 26 11.031729240917647 31.496791272695713 37.16726067451083 20.304218811875817 27 14.611508020462077 31.48621305081344 35.57401771716547 18.328261211559013 28 10.538350122870115 30.62313863980341 37.16671820159378 21.67179303573269 29 12.908143060957682 29.62932825578683 36.15744733944158 21.30508134381391 30 14.307451950461372 34.23546579437022 32.27361248989644 19.18346976527197 31 14.798932413299266 35.476372592098336 29.04752605226184 20.677168942340554 32 13.85855561161109 33.410093251094445 30.34973228961544 22.38161884767903 33 14.404283366152946 29.05159459913964 28.961815331369582 27.582306703337835 34 16.509349520725177 29.587829077633298 30.00987300709012 23.892948394551404 35 13.083633049619998 31.246440021481924 28.627652014473178 27.042274914424898 36 14.830395842487565 35.00930341052723 26.334890230605236 23.825410516379968 37 14.502199727678597 32.978827282047945 32.62025268388476 19.898720306388704 38 13.687405406285091 30.655144541908747 29.357820560808502 26.29962949099766 39 19.12352650793909 25.19352721315388 31.08803792970636 24.59490834920067 40 20.21145594306204 24.743817164928043 29.355650669140342 25.689076222869573 41 17.543574137061206 28.778459485410192 25.146060832912916 28.53190554461569 42 15.652513548261105 28.25443064754992 29.709885483967213 26.383170320221762 43 17.392766666124192 27.702735690920633 30.360581747956232 24.543915894998943 44 16.946582691859106 26.778090603826605 30.119723772790643 26.155602931523642 45 18.82679382231842 24.153064158271896 29.534937968221936 27.485204051187743 46 21.355531325098596 26.179742976331905 29.777423362138645 22.687302336430854 47 14.358715641121616 26.639488773522984 35.28704954405151 23.71474604130389 48 15.864077985906553 25.232314026722214 32.20363348359833 26.6999745037729 49 17.982434726946256 21.404353887632162 35.79154935689836 24.821662028523225 50 18.43567084913286 19.941033193917793 33.09274659462626 28.530549362323086 51 17.22785489934415 20.064717019002824 29.109639201262876 33.59778888039015 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3956.0 1 4491.5 2 5027.0 3 9272.0 4 13517.0 5 8746.5 6 3976.0 7 4222.5 8 4469.0 9 4718.5 10 4968.0 11 5218.5 12 5469.0 13 5384.5 14 5300.0 15 4943.0 16 4586.0 17 4412.5 18 4239.0 19 4283.5 20 4328.0 21 4039.0 22 3750.0 23 3597.0 24 3444.0 25 3785.5 26 4228.0 27 4329.0 28 4511.5 29 4694.0 30 5032.0 31 5370.0 32 5886.5 33 6403.0 34 6889.0 35 7375.0 36 8178.0 37 8981.0 38 9905.5 39 10830.0 40 11965.0 41 13100.0 42 16258.5 43 19417.0 44 21921.5 45 24426.0 46 34900.5 47 45375.0 48 46380.0 49 47385.0 50 45359.0 51 43333.0 52 33495.0 53 23657.0 54 18140.0 55 12623.0 56 9660.0 57 6697.0 58 5586.0 59 4475.0 60 3927.0 61 3379.0 62 2818.5 63 2258.0 64 1842.0 65 1426.0 66 1079.0 67 732.0 68 620.0 69 508.0 70 421.0 71 334.0 72 251.5 73 169.0 74 136.5 75 82.5 76 61.0 77 49.0 78 37.0 79 33.5 80 30.0 81 20.0 82 10.0 83 8.0 84 6.0 85 4.0 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 368682.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.81093673217524 #Duplication Level Percentage of deduplicated Percentage of total 1 73.26698801275049 30.633614003581528 2 11.125738865122779 9.303551275767035 3 4.713785104865599 5.912633123658168 4 2.5834026393823786 4.320579372358047 5 1.7340952538822896 3.625207347381889 6 1.214591782298196 3.04699320990539 7 0.9501460748924417 2.7808548196556764 8 0.7885549361006396 2.6376176434518666 9 0.6214587379363421 2.3385394776162487 >10 2.851218512716241 18.387958174115155 >50 0.08487978213502459 2.4836820229313377 >100 0.05066467615811545 3.975321802321425 >500 0.00789579368697903 2.23663434275939 >1k 0.005921845265234273 6.084030564590887 >5k 6.579828072482526E-4 2.2327828199059296 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8116 2.201355097346765 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCG 3056 0.8288986172365345 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGC 3037 0.8237451245246582 No Hit GCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTCTGC 2860 0.775736271366652 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCC 2661 0.7217602161212102 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2649 0.7185053786189725 No Hit GAATCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTC 2554 0.6927379150595906 No Hit CCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTCTGC 2552 0.692195442142551 TruSeq Adapter, Index 15 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTCTGCT 1617 0.4385893534265302 TruSeq Adapter, Index 14 (95% over 23bp) GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1129 0.3062259616688637 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAATCGCCT 873 0.23678942828779273 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 809 0.21943029494252497 No Hit TCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTCTGC 804 0.21807411264992593 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCG 799 0.2167179303573269 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 756 0.20505476264097516 No Hit ACTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTCTGC 712 0.19312035846610356 TruSeq Adapter, Index 14 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCT 671 0.18199966366679143 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGC 610 0.16545423969708312 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAATCGCCTCGTA 548 0.148637579268855 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 537 0.1456539782251371 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 507 0.13751688446954285 No Hit CGCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTCTG 504 0.13670317509398344 TruSeq Adapter, Index 14 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTCT 475 0.128837317796909 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 472 0.12802360842134958 No Hit ACCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTCTG 466 0.1263961896702307 TruSeq Adapter, Index 14 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTC 429 0.1163604407049978 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.712364585198084E-4 0.0 0.0 0.4705952555318676 0.0 2 2.712364585198084E-4 0.0 0.0 2.49130687150444 0.0 3 2.712364585198084E-4 0.0 0.0 3.3245452720772914 0.0 4 2.712364585198084E-4 0.0 0.0 4.452888939519695 0.0 5 2.712364585198084E-4 0.0 0.0 7.810253823077883 0.0 6 2.712364585198084E-4 0.0 0.0 9.270048442831492 0.0 7 2.712364585198084E-4 0.0 0.0 10.924862076260842 0.0 8 2.712364585198084E-4 0.0 0.0 13.172598608014495 0.0 9 2.712364585198084E-4 0.0 0.0 13.993360131495436 0.0 10 2.712364585198084E-4 0.0 0.0 17.28481455563331 0.0 11 2.712364585198084E-4 0.0 0.0 21.437715972030098 0.0 12 2.712364585198084E-4 0.0 0.0 25.18783124752497 0.0 13 2.712364585198084E-4 0.0 0.0 26.30369803787546 0.0 14 2.712364585198084E-4 0.0 0.0 26.79761962884003 0.0 15 2.712364585198084E-4 0.0 0.0 27.88744771917262 0.0 16 2.712364585198084E-4 0.0 0.0 29.909515517437793 0.0 17 2.712364585198084E-4 0.0 0.0 32.366917831627255 0.0 18 5.424729170396168E-4 0.0 0.0 34.85849593959021 0.0 19 5.424729170396168E-4 0.0 0.0 36.687443379389286 0.0 20 5.424729170396168E-4 0.0 0.0 38.088108451185576 0.0 21 5.424729170396168E-4 0.0 0.0 39.66046620122491 0.0 22 5.424729170396168E-4 0.0 0.0 41.29412339088971 0.0 23 5.424729170396168E-4 0.0 0.0 42.82823680027774 0.0 24 5.424729170396168E-4 0.0 0.0 43.87141221974493 0.0 25 5.424729170396168E-4 0.0 0.0 44.69190250676735 0.0 26 5.424729170396168E-4 0.0 0.0 45.39874471766997 0.0 27 5.424729170396168E-4 0.0 0.0 46.040761414986356 0.0 28 8.137093755594252E-4 0.0 0.0 46.63205689455954 0.0 29 8.137093755594252E-4 0.0 0.0 47.24722118248246 0.0 30 8.137093755594252E-4 0.0 0.0 47.86862390895134 0.0 31 8.137093755594252E-4 0.0 0.0 48.38071834263675 0.0 32 8.137093755594252E-4 0.0 0.0 48.86514665755312 0.0 33 8.137093755594252E-4 0.0 0.0 49.330317183914595 0.0 34 8.137093755594252E-4 0.0 0.0 49.74151165503062 0.0 35 8.137093755594252E-4 0.0 0.0 50.165996712614124 0.0 36 8.137093755594252E-4 0.0 0.0 50.527826148279544 0.0 37 8.137093755594252E-4 0.0 0.0 50.900505042285765 0.0 38 8.137093755594252E-4 0.0 0.0 51.324176390493705 0.0 39 8.137093755594252E-4 0.0 0.0 51.67135905739906 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTACG 20 7.027045E-4 45.000004 1 GATAAGC 20 7.027045E-4 45.000004 9 GCGCGAC 20 7.027045E-4 45.000004 9 GATCCGG 20 7.027045E-4 45.000004 5 GGCCGAT 30 2.161476E-6 45.000004 8 ACGGGTA 30 2.161476E-6 45.000004 5 TCGGAGT 20 7.027045E-4 45.000004 2 ACGGCCA 35 1.2089185E-7 45.000004 30 CGGGCTA 20 7.027045E-4 45.000004 6 ACGTGGC 20 7.027045E-4 45.000004 26 CCATACG 20 7.027045E-4 45.000004 2 GGCGAAA 20 7.027045E-4 45.000004 32 AGGGCGT 20 7.027045E-4 45.000004 6 AGTACGG 40 6.7939254E-9 45.000004 2 GGCTAAA 20 7.027045E-4 45.000004 8 CGGACGG 20 7.027045E-4 45.000004 2 CGGCCAA 25 3.8856328E-5 45.0 31 CGGGCGA 25 3.8856328E-5 45.0 6 TTCGCAG 25 3.8856328E-5 45.0 1 GCCAAAT 25 3.8856328E-5 45.0 33 >>END_MODULE