##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935246.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5243764 Sequences flagged as poor quality 0 Sequence length 51 %GC 31 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1622504368999 33.0 31.0 34.0 30.0 34.0 2 32.34071022265685 34.0 31.0 34.0 30.0 34.0 3 32.18826762607928 34.0 31.0 34.0 30.0 34.0 4 35.89211871472477 37.0 35.0 37.0 35.0 37.0 5 33.3196513039107 37.0 35.0 37.0 30.0 37.0 6 34.40806584735697 37.0 35.0 37.0 28.0 37.0 7 35.69288186882552 37.0 35.0 37.0 32.0 37.0 8 35.69318699315988 37.0 35.0 37.0 35.0 37.0 9 37.83949010672487 39.0 38.0 39.0 35.0 39.0 10 37.50390254023637 39.0 37.0 39.0 35.0 39.0 11 37.28999093017916 39.0 37.0 39.0 34.0 39.0 12 37.51169961119532 39.0 37.0 39.0 35.0 39.0 13 37.52018988650138 39.0 37.0 39.0 35.0 39.0 14 38.75324442518771 40.0 38.0 41.0 35.0 41.0 15 38.85163672507001 40.0 38.0 41.0 35.0 41.0 16 38.81146539012816 40.0 38.0 41.0 35.0 41.0 17 38.69162628218967 40.0 38.0 41.0 34.0 41.0 18 38.14765691209597 39.0 38.0 40.0 34.0 41.0 19 37.45577184633023 37.0 37.0 40.0 34.0 41.0 20 36.7217988833975 37.0 35.0 40.0 34.0 41.0 21 36.58917716357944 36.0 35.0 40.0 33.0 41.0 22 36.547385999827604 35.0 35.0 40.0 33.0 41.0 23 36.36210401535996 35.0 35.0 40.0 33.0 41.0 24 36.043865818522725 35.0 35.0 40.0 33.0 41.0 25 35.831777707768694 35.0 35.0 40.0 32.0 41.0 26 36.03995469666446 35.0 35.0 40.0 33.0 41.0 27 35.95346911111942 35.0 35.0 40.0 33.0 41.0 28 35.90805249816734 35.0 35.0 40.0 33.0 41.0 29 35.85339157139795 35.0 35.0 40.0 33.0 41.0 30 35.434436027250655 35.0 35.0 40.0 31.0 41.0 31 34.99841869313722 35.0 35.0 40.0 29.0 41.0 32 34.17067053360906 35.0 34.0 40.0 21.0 41.0 33 33.1497857264362 35.0 33.0 40.0 15.0 41.0 34 32.14441496604348 35.0 32.0 40.0 10.0 41.0 35 31.420529604307134 35.0 30.0 40.0 8.0 41.0 36 30.97384664908642 35.0 27.0 40.0 7.0 41.0 37 30.780250026507677 35.0 25.0 40.0 7.0 41.0 38 30.60059548827903 35.0 24.0 40.0 7.0 41.0 39 30.359460303705507 35.0 23.0 40.0 7.0 41.0 40 30.183756172093176 35.0 23.0 40.0 7.0 41.0 41 29.977966018302883 35.0 22.0 40.0 7.0 41.0 42 29.89644594989401 35.0 21.0 40.0 7.0 41.0 43 29.76174328211567 35.0 21.0 40.0 7.0 41.0 44 29.624798522587973 35.0 21.0 40.0 7.0 41.0 45 29.599329412994177 35.0 20.0 40.0 7.0 41.0 46 29.51016598000978 35.0 20.0 40.0 7.0 41.0 47 29.439536943310188 35.0 20.0 40.0 7.0 41.0 48 29.349123644771197 35.0 20.0 39.0 7.0 41.0 49 29.299077723558877 35.0 20.0 39.0 7.0 41.0 50 29.18738829588822 35.0 20.0 39.0 7.0 41.0 51 28.575458964209677 35.0 20.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 11.0 8 33.0 9 60.0 10 93.0 11 113.0 12 171.0 13 265.0 14 373.0 15 622.0 16 1224.0 17 2267.0 18 4586.0 19 8665.0 20 15097.0 21 23398.0 22 34997.0 23 54282.0 24 92593.0 25 168545.0 26 258096.0 27 286420.0 28 251346.0 29 201248.0 30 168246.0 31 156265.0 32 163146.0 33 191835.0 34 273635.0 35 418482.0 36 519749.0 37 458872.0 38 672437.0 39 816325.0 40 266.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.616026960786183 12.768976635866908 15.081475825380394 46.53352057796651 2 58.67453226346571 15.90411010106481 15.708697035183125 9.712660600286359 3 18.76566145997417 15.947323334917437 55.766392232754946 9.520622972353447 4 16.346578526417282 16.150402649699718 56.62733868267146 10.875680141211543 5 14.998157811831348 24.29703167419434 50.55359089386936 10.151219620104948 6 15.86644631604321 21.680056539539155 53.77385404835153 8.679643096066108 7 48.6813479782843 4.0840510747623275 44.73630010809029 2.498300838863076 8 50.011880778768834 4.323135060998169 43.38271135009127 2.2822728101417225 9 46.12856337546846 5.391070231230849 44.369769501449724 4.110596891850968 10 23.37033093022493 21.143667030018896 47.79435153832247 7.691650501433703 11 16.2609720803606 16.75437719927899 55.66081921306909 11.323831507291327 12 14.5950885661521 15.622518480999526 57.46713620216318 12.315256750685196 13 14.790825826639031 15.5958773125564 58.076545778948095 11.536751081856469 14 12.151099858803715 18.169009894419354 57.43460232001287 12.245287926764057 15 11.713284579550109 18.133825244614364 57.94580000167818 12.207090174157342 16 14.516557190598203 18.703950063351442 55.436304913798566 11.343187832251795 17 14.485529859848764 18.887749334256842 55.3792275930038 11.247493212890587 18 14.26441006879791 18.381452712212067 55.58123897261586 11.772898246374169 19 13.5260091796656 19.662784213782313 54.65184932044996 12.159357286102122 20 14.130632118455368 20.241032967921516 54.857636613699626 10.77069829992349 21 13.900606510895608 19.825968521848047 55.692876338446965 10.580548628809382 22 13.818280151433207 18.122154238825395 56.021590597898765 12.037975011842638 23 13.027436017334113 19.342670646505066 55.7794553683194 11.85043796784142 24 12.794568939410697 19.818206921592964 55.22750451774717 12.159719621249163 25 13.392135877968576 20.758676401150016 54.0580392252588 11.79114849562261 26 13.006382438263811 20.16925246826516 54.240312874492446 12.58405221897858 27 13.1870923252839 19.740209513624183 54.73470964749748 12.337988513594434 28 12.395084904660088 20.466596132091375 54.39859612293765 12.739722840310892 29 13.289938296231485 19.91319594093098 54.27500169725411 12.521864065583424 30 13.585184230259028 20.257967368478063 54.24862751260354 11.908220888659368 31 13.945955615088703 20.912973962977738 52.56169041932475 12.579380002608815 32 14.82063266005106 21.44520615344245 51.10212816595102 12.632033020555463 33 15.326738579386866 22.259964407246397 48.896041088042864 13.517255925323871 34 14.740213327678362 24.258166462106228 47.40192350380376 13.599696706411654 35 15.423501133918307 25.788231506986204 44.870383182767185 13.917884176328302 36 16.46715984929909 26.647633264960056 43.07690048598678 13.80830639975407 37 16.375756040889712 26.629325804898922 42.522356078572564 14.472562075638798 38 17.050176171162544 26.717125332108765 41.65519272034363 14.577505776385054 39 17.20065967881087 26.360644758230922 41.04341842996748 15.395277132990728 40 17.634088795758164 26.414403851889595 41.37348667865297 14.578020673699275 41 16.719097198119517 27.173877390363106 40.65859943353667 15.448425977980703 42 16.84297767786651 26.99156560058767 40.876153083929786 15.289303637616033 43 17.239410469273597 26.219162418445986 41.0171395966714 15.524287515609018 44 16.979044060716692 26.048254650666962 40.61391778882497 16.35878349979137 45 16.507417191162684 25.856674709235577 40.78049660511037 16.855411494491364 46 16.51248988322129 26.170476016845917 41.0643385171415 16.252695582791294 47 15.797602638104996 26.456091464070465 41.81854866084744 15.927757236977103 48 15.654518395564713 26.27736488522367 41.64910930392748 16.419007415284135 49 16.133067773454336 25.723144672414698 41.848927602386375 16.294859951744588 50 15.592406523253144 25.582329792111164 41.86765460840724 16.95760907622845 51 15.486738152212801 25.399464964479712 41.325048190574556 17.78874869273293 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 12319.0 1 13978.5 2 15638.0 3 408332.5 4 801027.0 5 491775.5 6 182524.0 7 175040.5 8 167557.0 9 167622.0 10 167687.0 11 166679.0 12 165671.0 13 162043.5 14 158416.0 15 150737.5 16 143059.0 17 133000.0 18 122941.0 19 112856.5 20 102772.0 21 95575.0 22 88378.0 23 83697.5 24 79017.0 25 77068.0 26 76704.5 27 78290.0 28 78835.0 29 79380.0 30 84604.5 31 89829.0 32 97205.0 33 104581.0 34 112727.5 35 120874.0 36 126399.5 37 131925.0 38 136724.5 39 141524.0 40 147620.5 41 153717.0 42 165931.0 43 178145.0 44 186621.5 45 195098.0 46 227889.5 47 260681.0 48 246216.0 49 231751.0 50 228276.5 51 224802.0 52 203560.0 53 182318.0 54 169504.5 55 156691.0 56 147638.5 57 138586.0 58 131615.0 59 124644.0 60 114158.0 61 103672.0 62 91036.5 63 78401.0 64 70823.0 65 63245.0 66 53684.5 67 44124.0 68 37010.5 69 29897.0 70 24820.0 71 19743.0 72 16344.0 73 12945.0 74 10750.5 75 6305.5 76 4055.0 77 2947.0 78 1839.0 79 1507.5 80 1176.0 81 911.0 82 646.0 83 452.0 84 258.0 85 215.5 86 173.0 87 101.0 88 29.0 89 23.0 90 17.0 91 15.0 92 13.0 93 10.5 94 8.0 95 4.5 96 1.0 97 1.5 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5243764.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.26804917049331 #Duplication Level Percentage of deduplicated Percentage of total 1 79.64674466495019 21.718113497935875 2 7.1264028178263095 3.886462048904597 3 2.899031601329635 2.371528087556113 4 1.6382280875429427 1.786851361744167 5 1.174733784698128 1.6016349301694128 6 0.8803443409456299 1.4403163665522576 7 0.6934229865105471 1.323580446448394 8 0.573297790655921 1.2506169875952666 9 0.473265201941819 1.161451691750967 >10 3.940040977139546 22.397350117051815 >50 0.7229563494977698 13.671683746027735 >100 0.21764629432606378 8.985352184914799 >500 0.008505534082128846 1.6369650799835564 >1k 0.0040710248510895854 2.185725709436148 >5k 0.0010177562127723964 1.9385723098492562 >10k+ 2.9078748936354186E-4 12.643795434079703 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 571981 10.907832617943905 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38450 0.7332519159901171 No Hit GAATCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTC 15338 0.2924998150183723 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCC 12065 0.23008281837245156 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9839 0.1876323953557025 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCG 9486 0.1809005897290572 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGT 9462 0.18044290322752893 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTT 8351 0.15925583226094842 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 7416 0.14142512897224208 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCG 6943 0.13240489083795534 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCT 6915 0.131870923252839 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTC 6274 0.11964687960785421 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGC 6131 0.11691983086958148 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 5767 0.10997825226306905 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 5470 0.10431438180665645 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTC 5327 0.10158733306838372 No Hit GAACTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTCT 5312 0.10130127900492852 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.721081269103644E-5 0.0 0.0 0.041420628388310385 0.0 2 5.721081269103644E-5 0.0 0.0 0.18727006020865927 0.0 3 5.721081269103644E-5 0.0 0.0 0.3241755349783095 0.0 4 7.628108358804859E-5 0.0 0.0 0.568332213272756 0.0 5 7.628108358804859E-5 0.0 0.0 1.1839968389118962 0.0 6 7.628108358804859E-5 0.0 0.0 1.7101074724186671 0.0 7 7.628108358804859E-5 0.0 0.0 2.14283098934277 0.0 8 7.628108358804859E-5 0.0 0.0 2.634443502796846 0.0 9 7.628108358804859E-5 0.0 0.0 3.04111702967563 0.0 10 7.628108358804859E-5 0.0 0.0 3.6715229747181604 0.0 11 7.628108358804859E-5 0.0 0.0 4.227154387573506 0.0 12 7.628108358804859E-5 0.0 0.0 4.702671592390504 0.0 13 7.628108358804859E-5 0.0 0.0 4.8916198364381005 0.0 14 7.628108358804859E-5 0.0 0.0 5.030470478839246 0.0 15 7.628108358804859E-5 0.0 0.0 5.152272299058462 0.0 16 7.628108358804859E-5 0.0 0.0 5.283819027706052 0.0 17 7.628108358804859E-5 0.0 0.0 5.431689908241484 0.0 18 9.535135448506073E-5 0.0 0.0 5.580361740154591 0.0 19 9.535135448506073E-5 0.0 0.0 5.742478113050091 0.0 20 9.535135448506073E-5 0.0 0.0 5.859397943919673 0.0 21 9.535135448506073E-5 0.0 0.0 5.977290358605002 0.0 22 1.1442162538207288E-4 0.0 0.0 6.122491401214853 0.0 23 1.1442162538207288E-4 0.0 0.0 6.250128724328555 0.0 24 1.1442162538207288E-4 0.0 0.0 6.349961592474413 0.0 25 1.3349189627908503E-4 0.0 0.0 6.443119865806318 0.0 26 1.5256216717609718E-4 0.0 0.0 6.5420182906782225 0.0 27 1.5256216717609718E-4 0.0 0.0 6.655448261973651 0.0 28 1.7163243807310932E-4 0.0 0.0 6.754861584159776 0.0 29 1.7163243807310932E-4 0.0 0.0 6.865431014820651 0.0 30 1.9070270897012147E-4 0.0 0.0 6.999323386788574 0.0 31 2.097729798671336E-4 0.0 0.0 7.115823671698421 0.0 32 2.097729798671336E-4 0.0 0.0 7.241229773117173 0.0 33 2.097729798671336E-4 0.0 0.0 7.363813474443167 0.0 34 2.097729798671336E-4 0.0 0.0 7.48449014867946 0.0 35 2.097729798671336E-4 0.0 0.0 7.610010671723594 0.0 36 2.097729798671336E-4 0.0 0.0 7.731679000046531 0.0 37 2.097729798671336E-4 0.0 0.0 7.8678979450638895 0.0 38 2.097729798671336E-4 0.0 0.0 8.04111321562145 0.0 39 2.097729798671336E-4 0.0 0.0 8.30828771088859 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 192815 0.0 44.57874 1 CGTTATT 14585 0.0 44.244087 1 GTTATTT 15785 0.0 41.33671 2 GTTTTTT 214815 0.0 40.11487 2 CGACGGT 180 0.0 37.500004 28 TACGGGA 1695 0.0 36.371685 4 CCGATGA 1790 0.0 36.201115 18 ACTAACG 100 0.0 36.0 1 CTAGCGT 25 0.0021077916 36.0 16 ACCACCG 2320 0.0 35.88362 14 TATAGCG 140 0.0 35.357143 1 CGAATAT 295 0.0 35.084747 14 CGATGAA 1905 0.0 35.078743 19 CTAACGG 290 0.0 34.913795 2 GCTAACG 110 0.0 34.772728 1 TATGGGA 3205 0.0 34.750393 4 TCGATCA 445 0.0 34.382023 17 CGACCAC 3125 0.0 34.344 12 ACGGGAT 2400 0.0 34.125 5 CGTTAGG 450 0.0 34.0 2 >>END_MODULE