##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935245.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1597899 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05921588285617 33.0 31.0 34.0 30.0 34.0 2 32.19810013023351 34.0 31.0 34.0 30.0 34.0 3 32.110848683177096 33.0 31.0 34.0 30.0 34.0 4 35.8428279885024 37.0 35.0 37.0 35.0 37.0 5 33.27930363558648 37.0 35.0 37.0 30.0 37.0 6 34.35982436937503 37.0 35.0 37.0 28.0 37.0 7 35.63270769929764 37.0 35.0 37.0 32.0 37.0 8 35.61383041105852 37.0 35.0 37.0 33.0 37.0 9 37.744017613128236 39.0 38.0 39.0 35.0 39.0 10 37.30197090053877 39.0 37.0 39.0 34.0 39.0 11 37.08691162582867 39.0 37.0 39.0 34.0 39.0 12 37.3566458205431 39.0 37.0 39.0 34.0 39.0 13 37.37121620327693 39.0 37.0 39.0 34.0 39.0 14 38.523725216675146 40.0 38.0 41.0 34.0 41.0 15 38.62747207426752 40.0 38.0 41.0 34.0 41.0 16 38.604240943889444 40.0 38.0 41.0 34.0 41.0 17 38.51442425334768 40.0 38.0 41.0 34.0 41.0 18 38.16859826559751 39.0 38.0 41.0 34.0 41.0 19 37.68735821225246 39.0 37.0 41.0 34.0 41.0 20 37.19111283003494 39.0 35.0 40.0 33.0 41.0 21 37.10484016824593 38.0 35.0 40.0 33.0 41.0 22 37.074924635411875 38.0 35.0 40.0 33.0 41.0 23 36.85400391388943 38.0 35.0 40.0 33.0 41.0 24 36.561044847014735 38.0 35.0 40.0 33.0 41.0 25 36.35679163701836 38.0 35.0 40.0 32.0 41.0 26 36.57263068566912 38.0 35.0 40.0 33.0 41.0 27 36.46858468526484 38.0 35.0 40.0 33.0 41.0 28 36.4570113630461 38.0 35.0 40.0 33.0 41.0 29 36.42350987139988 38.0 35.0 40.0 33.0 41.0 30 36.07330688610482 38.0 35.0 40.0 31.0 41.0 31 35.749449746197975 38.0 35.0 40.0 30.0 41.0 32 35.13811010583272 38.0 35.0 40.0 25.0 41.0 33 34.44576033904521 38.0 34.0 40.0 21.0 41.0 34 33.792931843627166 38.0 34.0 40.0 15.0 41.0 35 33.27483651970494 38.0 33.0 40.0 12.0 41.0 36 32.975066634374265 37.0 33.0 40.0 10.0 41.0 37 32.8584841720284 37.0 33.0 40.0 10.0 41.0 38 32.70528362556082 37.0 33.0 40.0 10.0 41.0 39 32.529954646695444 37.0 33.0 40.0 9.0 41.0 40 32.38543737745627 37.0 32.0 40.0 9.0 41.0 41 32.26439405744669 37.0 31.0 40.0 8.0 41.0 42 32.232457120256036 37.0 31.0 40.0 8.0 41.0 43 32.140508254902215 37.0 31.0 40.0 8.0 41.0 44 32.04403657552824 36.0 31.0 40.0 8.0 41.0 45 32.019087564357946 36.0 31.0 40.0 8.0 41.0 46 31.912381195557415 36.0 31.0 40.0 8.0 41.0 47 31.815654806718072 36.0 31.0 40.0 8.0 41.0 48 31.733173373285798 35.0 31.0 40.0 8.0 41.0 49 31.696622877916564 35.0 30.0 40.0 8.0 41.0 50 31.581573678937154 35.0 30.0 40.0 7.0 41.0 51 30.805126606875653 35.0 27.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 18.0 10 24.0 11 33.0 12 41.0 13 69.0 14 96.0 15 164.0 16 273.0 17 577.0 18 1094.0 19 2035.0 20 3620.0 21 5996.0 22 9368.0 23 15020.0 24 24216.0 25 40899.0 26 58034.0 27 60418.0 28 51912.0 29 43395.0 30 39178.0 31 39634.0 32 45009.0 33 56828.0 34 84423.0 35 121838.0 36 158551.0 37 173221.0 38 262748.0 39 299069.0 40 92.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.650059859853467 16.346840444859158 19.236322195583075 33.7667774997043 2 48.69788390880775 20.32080876200561 19.474134472829636 11.507172856357004 3 22.310734282955305 20.25102963328721 46.46094653041275 10.977289553344736 4 19.544852334221375 20.052957039212117 47.57428348099598 12.827907145570528 5 17.644732239021366 28.368000730959842 41.8930107597539 12.094256270264891 6 18.749870924257415 26.87723066351503 43.97255395991862 10.400344452308937 7 57.91899237686488 5.583957434105661 33.12875219272307 3.3682979963063997 8 58.7232359492058 5.939611952945712 31.889625063912046 3.447527033936438 9 53.9919606933855 7.279746717408296 33.35692681452332 5.3713657746828805 10 26.339462006046688 26.208289760491745 38.13013212975288 9.322116103708684 11 19.014969031209105 20.22042694813627 46.575909991808 14.18869402884663 12 17.37343849642562 18.799623755944523 49.00578822566383 14.821149521966031 13 17.460990963759286 18.998697664871184 50.38703948121878 13.153271890150755 14 14.752809783346757 21.942876239361812 48.59161937018548 14.712694607105956 15 14.13418495161459 21.441968484866692 49.53767415837922 14.8861724051395 16 16.395967454764037 22.40135327702189 46.345795322482836 14.856883945731239 17 16.310793110202834 21.944941451243164 46.64468780567483 15.099577632879175 18 15.798808310162283 22.158722172052176 47.51896083544705 14.523508682338496 19 15.546226638855146 22.946256302807626 46.311249960103865 15.196267098233369 20 16.147078131972044 23.840743376145802 46.57841327893691 13.433765212945248 21 15.929980555717227 23.06372305133178 47.686993983975206 13.319302408975787 22 15.250776175465408 21.374129403673198 47.49999843544555 15.875095985415848 23 14.399283058566281 23.09150953846269 47.146221381952174 15.362986021018852 24 14.807256278400574 23.559373902856187 46.35292969080023 15.280440127943004 25 14.832664642759022 24.996698790098748 44.76459400750611 15.406042559636122 26 14.426944381340748 24.424760263320774 45.386035037258296 15.762260318080179 27 14.626644112049636 23.778849601883472 46.044399552161934 15.55010673390496 28 13.31485907432197 24.46349863164067 45.604196510542906 16.61744578349445 29 14.585339874422601 24.122988999930534 45.13307787288183 16.158593252765037 30 15.400723074487185 24.367372405890485 44.50331341342601 15.728591106196324 31 15.355288413097448 25.881986283238177 42.85546207864201 15.907263225022358 32 16.387393696347516 26.121363114940305 41.91929527460747 15.571947914104708 33 16.70487308647167 25.39378271092228 40.99771011809883 16.903634084507217 34 15.879038662643886 26.527458869427917 39.70551330215489 17.887989165773305 35 16.40260116565565 27.905643598249952 37.74662854160369 17.945126694490703 36 17.79618111032049 28.854326837929058 36.006593658297554 17.342898393452902 37 17.44165307068845 28.807202457727303 36.08626077117515 17.6648837004091 38 18.927541728231883 28.26323816461491 36.203039115738854 16.60618099141435 39 19.373502330247405 26.334267685254197 36.14120792365475 18.151022060843644 40 18.58847148662087 26.867467843712273 36.85627189202822 17.687788777638637 41 18.061154052915736 27.83423733289776 34.83505528196713 19.26955333221937 42 18.463557458888204 28.038505562616912 35.54173323845875 17.956203740036138 43 19.086062385670182 26.767273776377603 35.85839906026601 18.2882647776862 44 18.47613647671098 26.388088358525792 35.37926990379241 19.756505260970812 45 18.03562052420084 25.869031772346062 35.802450592934846 20.292897110518247 46 18.572137538104723 26.62120697240564 36.081379361273775 18.725276128215864 47 16.43971239734176 27.12205214472254 37.59161248614587 18.84662297178983 48 17.092006440957782 27.079183352639934 36.517952636555876 19.310857569846405 49 18.12968153806968 25.909397277299757 37.36919542474212 18.59172575988845 50 17.286386686517734 25.476954425780352 37.08075416531333 20.155904722388588 51 16.823591478560285 25.03869143168623 35.96097125037315 22.176745839380335 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6110.0 1 8057.5 2 10005.0 3 82332.0 4 154659.0 5 95079.5 6 35500.0 7 34519.0 8 33538.0 9 34403.5 10 35269.0 11 35966.5 12 36664.0 13 35687.5 14 34711.0 15 33438.5 16 32166.0 17 29989.5 18 27813.0 19 27218.5 20 26624.0 21 24679.0 22 22734.0 23 22336.5 24 21939.0 25 21913.5 26 22882.0 27 23876.0 28 25776.0 29 27676.0 30 29297.0 31 30918.0 32 33276.0 33 35634.0 34 38431.0 35 41228.0 36 44106.0 37 46984.0 38 48188.0 39 49392.0 40 52482.5 41 55573.0 42 62310.0 43 69047.0 44 73632.0 45 78217.0 46 93394.0 47 108571.0 48 109262.5 49 109954.0 50 105827.5 51 101701.0 52 87033.5 53 72366.0 54 64199.0 55 56032.0 56 50520.0 57 45008.0 58 41439.0 59 37870.0 60 33895.5 61 29921.0 62 27395.0 63 24869.0 64 20974.0 65 17079.0 66 14243.0 67 11407.0 68 9714.0 69 8021.0 70 6805.0 71 5589.0 72 5226.0 73 4863.0 74 3986.0 75 2468.0 76 1827.0 77 1342.0 78 857.0 79 589.5 80 322.0 81 257.5 82 193.0 83 136.5 84 80.0 85 75.0 86 70.0 87 39.0 88 8.0 89 7.5 90 7.0 91 5.0 92 3.0 93 4.0 94 5.0 95 3.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1597899.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.24601881712005 #Duplication Level Percentage of deduplicated Percentage of total 1 78.06805060391383 26.735199299975132 2 8.601496329800813 5.891340103314954 3 3.3074029463946144 3.397961506140848 4 1.9429333451348711 2.6615092759159524 5 1.3045145852723519 2.233721551722226 6 0.9458280018471474 1.9434506129409883 7 0.7238237199549497 1.7351656513698528 8 0.6114965448417127 1.675305774500255 9 0.4709841794192121 1.4516399763860564 >10 3.440374947085309 23.837166333237743 >50 0.4517029482868893 10.55554228433679 >100 0.12284758405209509 6.255289980028603 >500 0.003987323198265084 1.0269856360554261 >1k 0.003987323198265084 2.6378848476317924 >5k 3.7974506650143664E-4 0.7849020902130587 >10k+ 1.8987253325071832E-4 7.176935076230316 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 110374 6.9074453391609865 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCC 6668 0.4172979643894889 No Hit GAATCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTC 5403 0.3381315089376738 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4501 0.28168238418072733 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCG 3171 0.19844808714443155 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGC 2827 0.17691981783579563 No Hit GCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGC 2824 0.1767320713011273 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCG 2645 0.16552986139924988 No Hit CCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGC 2360 0.14769394060575794 No Hit CTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGCT 1976 0.12366238416821089 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGT 1951 0.12209782971264141 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1872 0.11715383763304188 No Hit GAACTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCT 1705 0.10670261386983783 No Hit CGCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTG 1662 0.10401158020625834 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTC 1615 0.10107021782978774 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGC 1608 0.1006321425822283 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13211097822828602 0.0 2 0.0 0.0 0.0 0.58645759212566 0.0 3 0.0 0.0 0.0 0.8576261703649605 0.0 4 0.0 0.0 0.0 1.262032206040557 0.0 5 0.0 0.0 0.0 2.3375069387990104 0.0 6 0.0 0.0 0.0 3.0190268596450713 0.0 7 0.0 0.0 0.0 3.6960408636590922 0.0 8 0.0 0.0 0.0 4.5639930934308115 0.0 9 6.258217822277878E-5 0.0 0.0 5.0107672637632295 0.0 10 6.258217822277878E-5 0.0 0.0 6.049068182657352 0.0 11 6.258217822277878E-5 0.0 0.0 7.427127747122941 0.0 12 6.258217822277878E-5 0.0 0.0 8.560678741272133 0.0 13 6.258217822277878E-5 0.0 0.0 8.97140557694823 0.0 14 6.258217822277878E-5 0.0 0.0 9.194949117559997 0.0 15 6.258217822277878E-5 0.0 0.0 9.506045125505429 0.0 16 6.258217822277878E-5 0.0 0.0 9.998191375049363 0.0 17 6.258217822277878E-5 0.0 0.0 10.626954519653621 0.0 18 6.258217822277878E-5 0.0 0.0 11.256781561287665 0.0 19 1.2516435644555757E-4 0.0 0.0 11.77646396924962 0.0 20 1.2516435644555757E-4 0.0 0.0 12.207217101957008 0.0 21 1.2516435644555757E-4 0.0 0.0 12.666507707933981 0.0 22 1.2516435644555757E-4 0.0 0.0 13.172609783221592 0.0 23 1.2516435644555757E-4 0.0 0.0 13.626893814940743 0.0 24 1.2516435644555757E-4 0.0 0.0 13.954136024867655 0.0 25 1.2516435644555757E-4 0.0 0.0 14.214728214987305 0.0 26 1.2516435644555757E-4 0.0 0.0 14.465995660551762 0.0 27 1.2516435644555757E-4 0.0 0.0 14.72877822690921 0.0 28 2.5032871289111514E-4 0.0 0.0 14.976415906136745 0.0 29 2.5032871289111514E-4 0.0 0.0 15.229748563582554 0.0 30 2.5032871289111514E-4 0.0 0.0 15.503545593307212 0.0 31 2.5032871289111514E-4 0.0 0.0 15.7609460923375 0.0 32 2.5032871289111514E-4 0.0 0.0 15.99562926067292 0.0 33 2.5032871289111514E-4 0.0 0.0 16.218609561680683 0.0 34 2.5032871289111514E-4 0.0 0.0 16.42913600922211 0.0 35 2.5032871289111514E-4 0.0 0.0 16.671391621122485 0.0 36 2.5032871289111514E-4 0.0 0.0 16.898314599358283 0.0 37 2.5032871289111514E-4 0.0 0.0 17.13431199343638 0.0 38 2.5032871289111514E-4 0.0 0.0 17.381949672663918 0.0 39 2.5032871289111514E-4 0.0 0.0 17.756253680614357 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTA 20 7.0341135E-4 45.000004 41 CATATCG 20 7.0341135E-4 45.000004 1 TATACGA 20 7.0341135E-4 45.000004 32 TCCGTAT 25 3.891492E-5 45.0 40 CGTTTTT 38780 0.0 44.257347 1 CGTTATT 2690 0.0 44.16357 1 CGGTCTA 60 3.6379788E-12 41.249996 31 CGGGTAC 50 1.0822987E-9 40.5 6 ACGGGTC 50 1.0822987E-9 40.5 5 ATGATCG 45 1.9290383E-8 40.0 10 TCGATAG 45 1.9290383E-8 40.0 1 TAATACG 85 0.0 39.705883 4 ATATCGG 40 3.459354E-7 39.375004 2 GGCGATA 360 0.0 39.375 8 GTTATTT 3085 0.0 39.23825 2 GTTTTTT 44940 0.0 38.786716 2 TCGGGTA 70 0.0 38.571426 5 ACTACGG 70 0.0 38.571426 2 GTATCCG 35 6.24982E-6 38.571426 1 ATACGAG 35 6.24982E-6 38.571426 1 >>END_MODULE