##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935244.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 493842 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.69041110314635 31.0 31.0 34.0 30.0 34.0 2 31.791978001061068 33.0 31.0 34.0 30.0 34.0 3 31.78726394271852 33.0 31.0 34.0 30.0 34.0 4 35.60436333888167 37.0 35.0 37.0 33.0 37.0 5 32.97664435183723 37.0 35.0 37.0 28.0 37.0 6 34.02392060618578 37.0 35.0 37.0 27.0 37.0 7 35.36439589990321 37.0 35.0 37.0 32.0 37.0 8 35.269152886955744 37.0 35.0 37.0 33.0 37.0 9 37.33837543181827 39.0 37.0 39.0 34.0 39.0 10 36.74190125586726 39.0 37.0 39.0 32.0 39.0 11 36.60462658097124 39.0 35.0 39.0 32.0 39.0 12 37.00895833080216 39.0 37.0 39.0 33.0 39.0 13 36.98297836150024 39.0 37.0 39.0 33.0 39.0 14 38.01387893293806 40.0 37.0 41.0 33.0 41.0 15 38.11751126878637 40.0 37.0 41.0 33.0 41.0 16 38.13612045958019 40.0 37.0 41.0 33.0 41.0 17 38.009665034565714 40.0 37.0 41.0 33.0 41.0 18 37.89479631137085 39.0 37.0 40.0 33.0 41.0 19 37.61679849020537 39.0 37.0 40.0 33.0 41.0 20 37.23940248095545 39.0 35.0 40.0 33.0 41.0 21 37.251124853698144 39.0 35.0 40.0 33.0 41.0 22 37.263762498936906 39.0 35.0 40.0 33.0 41.0 23 36.927561851766356 39.0 35.0 40.0 32.0 41.0 24 36.66754954013632 38.0 35.0 40.0 31.0 41.0 25 36.51337067321127 38.0 35.0 40.0 31.0 41.0 26 36.74479286897429 38.0 35.0 40.0 32.0 41.0 27 36.623978924433324 38.0 35.0 40.0 32.0 41.0 28 36.69214850093755 38.0 35.0 40.0 32.0 41.0 29 36.69329866637508 39.0 35.0 40.0 32.0 41.0 30 36.3986902693574 38.0 35.0 40.0 31.0 41.0 31 36.198328615225115 38.0 35.0 40.0 30.0 41.0 32 35.76485799101737 38.0 35.0 40.0 28.0 41.0 33 35.41711721562767 38.0 35.0 40.0 25.0 41.0 34 35.12023278700475 38.0 35.0 40.0 23.0 41.0 35 34.840471243839126 38.0 35.0 40.0 21.0 41.0 36 34.65272496061493 38.0 35.0 40.0 20.0 41.0 37 34.60854078834931 38.0 35.0 40.0 18.0 41.0 38 34.47535446559831 38.0 34.0 40.0 18.0 41.0 39 34.34812551382831 38.0 34.0 40.0 18.0 41.0 40 34.34621397127016 38.0 34.0 40.0 18.0 41.0 41 34.19215660069415 38.0 34.0 40.0 17.0 41.0 42 34.27484094102972 38.0 34.0 40.0 17.0 41.0 43 34.159131868087364 38.0 34.0 40.0 15.0 41.0 44 34.106888438002436 38.0 34.0 40.0 15.0 41.0 45 34.104802750677344 38.0 34.0 40.0 15.0 41.0 46 33.94147115879168 38.0 33.0 40.0 15.0 41.0 47 33.81180620522353 38.0 33.0 40.0 15.0 41.0 48 33.77436508032934 38.0 33.0 40.0 15.0 41.0 49 33.77712507239158 38.0 33.0 40.0 14.0 41.0 50 33.69789932812519 38.0 33.0 40.0 13.0 41.0 51 32.73983986781197 37.0 31.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 7.0 10 9.0 11 9.0 12 14.0 13 15.0 14 35.0 15 34.0 16 55.0 17 155.0 18 254.0 19 531.0 20 1052.0 21 1789.0 22 2945.0 23 4437.0 24 6271.0 25 8948.0 26 11097.0 27 11434.0 28 10389.0 29 9871.0 30 10067.0 31 11672.0 32 14498.0 33 18921.0 34 27519.0 35 38700.0 36 50542.0 37 67754.0 38 100951.0 39 83845.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.15763341311594 20.73497191409398 22.148986922942964 19.95840774984712 2 38.11421466784923 26.675130912316085 21.91490395713609 13.295750462698596 3 23.927288484981027 26.262448313428184 36.87576188335541 12.934501318235386 4 21.660571599823424 22.265825911931348 41.430255020836626 14.643347467408605 5 20.927138639483882 29.938725341303495 34.05623661008987 15.077899409122756 6 18.952215485924647 33.72353910764981 35.946112319324804 11.378133087100732 7 60.94337865147153 6.781116227457365 27.4259783493506 4.84952677172051 8 59.186743938344655 9.736919905556839 24.159549005552382 6.916787150546126 9 54.14748036821494 8.36198622231402 26.058941928795036 11.431591480676005 10 29.42540326663184 21.289197759607323 34.646303878568446 14.639095095192388 11 20.491371734279383 22.60702815880383 37.28662203700779 19.614978069909 12 17.204085517230208 19.40640933739941 43.67368510576257 19.71582003960781 13 19.24623665058865 21.857800673089773 45.32360552565395 13.57235715066762 14 15.812749826867703 26.154721550617406 40.389233803524206 17.64329481899069 15 13.478197480165722 24.121480149521506 44.75945747830278 17.640864892009994 16 13.81656481222739 24.432308309135312 39.31662353546276 22.43450334317454 17 14.126785490096022 26.490658955698382 38.880046654598026 20.502508899607566 18 14.149262314667443 24.174533555266663 42.53283438832663 19.14336974173926 19 13.689398633571063 26.707934926555453 39.72890114652054 19.873765293352935 20 15.454538091130363 26.849478173180895 41.59265514071302 16.10332859497572 21 14.662989377169216 28.265720615095518 40.73934578265923 16.331944225076036 22 12.521211237602309 24.48050186091908 39.48185857014997 23.516428331328644 23 13.472122662713987 25.957289983436 39.15179348860567 21.41879386524435 24 15.684368684721022 24.25148124298865 38.65224100015794 21.41190907213238 25 12.585199314760592 29.615140065041047 36.253093094552504 21.546567525645855 26 12.62590059168722 27.091863389505143 40.31451354886786 19.967722469939776 27 15.801410167624464 26.07149655152863 39.359957233285144 18.76713604756177 28 11.558352671502222 27.279980236593893 39.46059670906889 21.701070382835 29 13.979167426018849 25.70255263829322 37.79974161776439 22.518538317923547 30 14.915296795331301 28.155563925304044 37.45732440740156 19.471814871963097 31 14.77395604262092 31.14012173934173 31.849255429874333 22.236666788163014 32 14.763831346868026 29.436945419790135 31.156928734291533 24.642294499050305 33 15.138647583640111 26.80918188408438 31.50785068908679 26.544319843188713 34 16.352193616581822 28.05796185824616 30.74708105021444 24.84276347495758 35 14.247269369555445 27.409778836145975 30.9149485057974 27.42800328850118 36 15.16983164655902 33.37707201898583 30.51704796270872 20.93604837174643 37 14.868925688783053 29.043702236747787 33.62532955884676 22.462042515622404 38 14.490667055454983 29.03033763835397 27.710887287837 28.76810801835405 39 19.582376549584684 25.368640172362824 28.982144086570198 26.066839191482295 40 19.736271925028653 23.49293903718193 30.461969617812983 26.30881941997643 41 17.727532287654757 28.706144880346347 28.27544032301829 25.290882508980605 42 16.23434215801815 28.180268182941106 32.48306138400541 23.102328275035337 43 16.94833570251214 27.775482846740456 32.22670408754217 23.049477363205238 44 17.424803884643268 24.29279000166045 30.95929467319507 27.323111440501215 45 18.791232823453655 22.434908331004653 30.25583081228409 28.518028033257604 46 20.56548450719056 24.919508668764504 30.884574418538723 23.630432405506212 47 14.946075870420096 25.936230616269977 36.08522563896955 23.032467874340377 48 16.303595076967937 25.1463018536293 33.38071690945687 25.169386159945894 49 17.485957046990737 22.41627889081933 35.49698081572649 24.600783246463443 50 17.90613192073578 20.983431947869967 33.433770315202025 27.676665816192227 51 16.902774571624125 20.79754253384686 30.623154774199037 31.676528120329984 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2903.0 1 3975.5 2 5048.0 3 13435.0 4 21822.0 5 14277.0 6 6732.0 7 6530.0 8 6328.0 9 6624.0 10 6920.0 11 7077.5 12 7235.0 13 7029.5 14 6824.0 15 6473.5 16 6123.0 17 5776.5 18 5430.0 19 5469.5 20 5509.0 21 5048.5 22 4588.0 23 4671.0 24 4754.0 25 4765.5 26 5147.5 27 5518.0 28 5863.5 29 6209.0 30 6643.5 31 7078.0 32 7566.5 33 8055.0 34 8799.5 35 9544.0 36 10468.5 37 11393.0 38 12159.0 39 12925.0 40 14585.0 41 16245.0 42 20404.0 43 24563.0 44 29754.0 45 34945.0 46 48931.5 47 62918.0 48 61686.5 49 60455.0 50 56934.0 51 53413.0 52 42515.0 53 31617.0 54 24852.0 55 18087.0 56 14400.5 57 10714.0 58 9238.0 59 7762.0 60 6829.0 61 5896.0 62 4902.0 63 3908.0 64 3376.5 65 2845.0 66 2287.0 67 1729.0 68 1420.5 69 1112.0 70 912.5 71 713.0 72 617.5 73 522.0 74 403.0 75 247.0 76 210.0 77 144.5 78 79.0 79 75.5 80 72.0 81 44.5 82 17.0 83 14.5 84 12.0 85 7.0 86 2.0 87 2.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 493842.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.67763118600122 #Duplication Level Percentage of deduplicated Percentage of total 1 76.9820762998972 36.703230417591044 2 10.187775724616694 9.714580272079424 3 4.1070546818315155 5.8744391514330765 4 2.2958692520120514 4.378464297948442 5 1.4593145949747448 3.4788331521777316 6 1.00290711872019 2.8689741432093814 7 0.7820334963311417 2.609985322922265 8 0.6155243162988872 2.3477393070811123 9 0.4450305207150611 1.9096200929850082 >10 2.012275039265431 15.198783431818914 >50 0.062140655737094284 2.0213918411656944 >100 0.038141505932136346 3.2871881066085136 >500 0.0055712312035704785 2.03630760010321 >1k 0.0038570062178564847 4.8625374540694555 >5k 0.0 0.0 >10k+ 4.2855624642849834E-4 2.7079254088067275 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13253 2.683651856261719 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCG 3967 0.803293361034501 No Hit GAATCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTC 3785 0.7664394684939717 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGC 3697 0.7486200039688807 No Hit GCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC 3147 0.6372483506870619 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCC 3076 0.6228712827179543 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2070 0.4191624041697547 No Hit CCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC 1561 0.31609300140530777 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATACCGCAT 1272 0.2575722599535884 No Hit CTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGCT 1223 0.2476500581157536 No Hit GAATGACTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCT 998 0.20208892722773678 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCG 944 0.19115425581461276 No Hit TCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC 934 0.18912931666403424 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 895 0.181232053976778 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 851 0.17232232171423248 No Hit GAACTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCT 802 0.1624001198763977 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 780 0.15794525374512497 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGC 691 0.1399232953049761 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 665 0.13465845351347192 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTC 630 0.1275711664864471 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATACCGCATCGTA 617 0.124938745590695 No Hit ACTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC 588 0.11906642205401728 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 571 0.11562402549803379 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3282426363087789 0.0 2 0.0 0.0 0.0 1.951028871582409 0.0 3 2.024939150578525E-4 0.0 0.0 2.6370782557984134 0.0 4 2.024939150578525E-4 0.0 0.0 3.727507988384949 0.0 5 2.024939150578525E-4 0.0 0.0 6.963968232754605 0.0 6 2.024939150578525E-4 0.0 0.0 8.544028251951028 0.0 7 2.024939150578525E-4 0.0 0.0 10.252469413294131 0.0 8 2.024939150578525E-4 0.0 0.0 12.509466590528955 0.0 9 2.024939150578525E-4 0.0 0.0 13.303647725385852 0.0 10 2.024939150578525E-4 0.0 0.0 16.559547385601064 0.0 11 2.024939150578525E-4 0.0 0.0 20.32978159006322 0.0 12 2.024939150578525E-4 0.0 0.0 23.627394996780346 0.0 13 2.024939150578525E-4 0.0 0.0 24.59734084990746 0.0 14 2.024939150578525E-4 0.0 0.0 24.987546624223942 0.0 15 2.024939150578525E-4 0.0 0.0 25.855030556331783 0.0 16 2.024939150578525E-4 0.0 0.0 27.601135585875646 0.0 17 2.024939150578525E-4 0.0 0.0 29.729954114878847 0.0 18 2.024939150578525E-4 0.0 0.0 31.814426476484382 0.0 19 2.024939150578525E-4 0.0 0.0 33.47710401302441 0.0 20 2.024939150578525E-4 0.0 0.0 34.70826701657615 0.0 21 2.024939150578525E-4 0.0 0.0 36.19335738961044 0.0 22 2.024939150578525E-4 0.0 0.0 37.78657951328562 0.0 23 2.024939150578525E-4 0.0 0.0 39.27288484981026 0.0 24 2.024939150578525E-4 0.0 0.0 40.27543222326169 0.0 25 2.024939150578525E-4 0.0 0.0 41.121046812543284 0.0 26 2.024939150578525E-4 0.0 0.0 41.80304631845813 0.0 27 2.024939150578525E-4 0.0 0.0 42.445357017021635 0.0 28 2.024939150578525E-4 0.0 0.0 43.044334017762765 0.0 29 2.024939150578525E-4 0.0 0.0 43.64351351241895 0.0 30 2.024939150578525E-4 0.0 0.0 44.23216332349213 0.0 31 2.024939150578525E-4 0.0 0.0 44.73029835453445 0.0 32 2.024939150578525E-4 0.0 0.0 45.186719639074845 0.0 33 2.024939150578525E-4 0.0 0.0 45.61175436678128 0.0 34 2.024939150578525E-4 0.0 0.0 45.98859554270394 0.0 35 2.024939150578525E-4 0.0 0.0 46.40472053814783 0.0 36 2.024939150578525E-4 0.0 0.0 46.803633550811796 0.0 37 2.024939150578525E-4 0.0 0.0 47.22036602800086 0.0 38 2.024939150578525E-4 0.0 0.0 47.617659089344365 0.0 39 2.024939150578525E-4 0.0 0.0 47.97809825814734 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTAA 35 1.2100463E-7 45.000004 33 TTAGCGG 35 1.2100463E-7 45.000004 2 TACGGGT 70 0.0 45.000004 4 CCATCGA 60 0.0 45.000004 41 TCGTAAC 35 1.2100463E-7 45.000004 34 CAGCGTG 20 7.029374E-4 45.0 1 ACCGGGT 20 7.029374E-4 45.0 4 GCGACCG 40 6.8012014E-9 45.0 33 TTAGACG 20 7.029374E-4 45.0 1 GTTAGCG 20 7.029374E-4 45.0 1 CGTTATT 465 0.0 45.0 1 ACGATAG 20 7.029374E-4 45.0 1 TGACCGG 20 7.029374E-4 45.0 2 CTACGAA 20 7.029374E-4 45.0 11 CGAATAT 20 7.029374E-4 45.0 14 TCCGTAG 20 7.029374E-4 45.0 1 GGGCCGA 45 3.8380676E-10 45.0 7 TACACGC 20 7.029374E-4 45.0 35 TGCACGG 50 2.1827873E-11 45.0 2 AGTAACG 20 7.029374E-4 45.0 1 >>END_MODULE