##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935238.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 619428 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.44790839290442 31.0 31.0 34.0 30.0 34.0 2 31.53368914546969 31.0 31.0 34.0 30.0 34.0 3 31.586069728846613 31.0 31.0 34.0 30.0 34.0 4 35.43956359738339 37.0 35.0 37.0 33.0 37.0 5 32.8876802469375 35.0 35.0 37.0 28.0 37.0 6 33.865569525433145 35.0 35.0 37.0 26.0 37.0 7 35.23785008104251 37.0 35.0 37.0 32.0 37.0 8 35.069807951852354 37.0 35.0 37.0 32.0 37.0 9 37.122006108861726 39.0 37.0 39.0 34.0 39.0 10 36.64196645937865 39.0 35.0 39.0 32.0 39.0 11 36.4590121854356 39.0 35.0 39.0 32.0 39.0 12 36.892526653622376 39.0 37.0 39.0 33.0 39.0 13 36.87364310299179 39.0 37.0 39.0 33.0 39.0 14 37.74372969901264 39.0 37.0 41.0 33.0 41.0 15 37.85409442259633 39.0 37.0 41.0 33.0 41.0 16 37.85428007774915 39.0 37.0 41.0 33.0 41.0 17 37.81783354966195 39.0 37.0 41.0 33.0 41.0 18 37.77631944309912 39.0 37.0 40.0 33.0 41.0 19 37.633825077329405 39.0 37.0 40.0 33.0 41.0 20 37.42204905170577 39.0 35.0 40.0 32.0 41.0 21 37.39035529553072 39.0 35.0 40.0 33.0 41.0 22 37.37722866903014 39.0 35.0 40.0 33.0 41.0 23 37.06280794539478 39.0 35.0 40.0 32.0 41.0 24 36.80378187618254 39.0 35.0 40.0 31.0 41.0 25 36.57586676740477 38.0 35.0 40.0 31.0 41.0 26 36.98174606249637 39.0 35.0 40.0 32.0 41.0 27 36.87331053810935 39.0 35.0 40.0 32.0 41.0 28 36.99613998721401 39.0 35.0 40.0 32.0 41.0 29 37.12503793822688 39.0 35.0 40.0 32.0 41.0 30 36.81663728472074 39.0 35.0 40.0 31.0 41.0 31 36.775602652769976 39.0 35.0 40.0 31.0 41.0 32 36.5936444590816 39.0 35.0 40.0 31.0 41.0 33 36.524982725998825 39.0 35.0 40.0 31.0 41.0 34 36.47009014768464 39.0 35.0 40.0 30.0 41.0 35 36.31409784510871 39.0 35.0 40.0 30.0 41.0 36 36.170949650322555 39.0 35.0 40.0 30.0 41.0 37 36.14618002415131 39.0 35.0 40.0 30.0 41.0 38 36.007248622923086 39.0 35.0 40.0 29.0 41.0 39 35.93316737377064 39.0 35.0 40.0 29.0 41.0 40 35.802598526382404 39.0 35.0 40.0 28.0 41.0 41 35.70544276332358 39.0 35.0 40.0 27.0 41.0 42 35.88231723460999 39.0 35.0 40.0 28.0 41.0 43 35.76102307289951 39.0 35.0 40.0 27.0 41.0 44 35.62847498014297 39.0 35.0 40.0 26.0 41.0 45 35.550714530179455 39.0 35.0 40.0 26.0 41.0 46 35.405152818406656 39.0 35.0 40.0 26.0 41.0 47 35.316629212757576 39.0 35.0 40.0 25.0 41.0 48 35.304782799615126 39.0 35.0 40.0 25.0 41.0 49 35.352867484195095 39.0 35.0 40.0 26.0 41.0 50 35.220529262480866 38.0 35.0 40.0 25.0 41.0 51 34.1915961177086 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 9.0 10 9.0 11 13.0 12 10.0 13 14.0 14 23.0 15 34.0 16 76.0 17 121.0 18 250.0 19 491.0 20 863.0 21 1590.0 22 2640.0 23 3636.0 24 4752.0 25 6136.0 26 7912.0 27 8833.0 28 9267.0 29 9858.0 30 11296.0 31 13992.0 32 18584.0 33 24432.0 34 35687.0 35 52511.0 36 68058.0 37 92577.0 38 140282.0 39 105459.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.32054088610783 21.796560697934222 22.211782483194174 14.671115932763776 2 32.19696235882136 29.632015343187586 23.308600838192657 14.862421459798394 3 25.316420956107894 29.57841750776523 32.07087829416817 13.034283241958711 4 23.222069393052948 24.276429221798175 37.16719295866509 15.334308426483789 5 21.76281989190027 32.536630568847386 29.370645175871935 16.32990436338041 6 19.81376366583364 36.559051253737316 30.741425960725056 12.885759119703986 7 63.71329678348412 7.4442873102281455 23.027373641488598 5.815042264799137 8 59.36589886153032 11.476071472390657 19.729976688170375 9.428052977908651 9 54.45717662101164 9.388661797658484 22.294762264540836 13.859399316789037 10 28.576041121809155 29.03178416216251 28.886004507384232 13.506170208644102 11 17.128382959762877 23.4295188464196 38.46306592533757 20.97903226847995 12 16.365259562047566 20.706199913468552 42.69697204517716 20.231568479306716 13 18.407466243050038 23.16072247299121 44.582259762232255 13.849551521726497 14 14.4635050401338 28.527286464286405 37.03206829526596 19.97714020031384 15 11.229876595827118 26.449724584616774 43.81041864429764 18.509980175258463 16 11.175310124824838 28.284481812252594 35.83225169026908 24.70795637265348 17 11.621689687905617 28.589602019928062 36.43894044182698 23.349767850339344 18 11.446366647939712 25.970088533292007 42.02409319565793 20.559451623110352 19 11.584397218078614 27.643567936870788 38.173928204730814 22.598106640319777 20 12.988111612649089 29.732914882762806 40.861569060488065 16.41740444410004 21 13.724597531916544 30.76564185022311 38.3657180495554 17.14404256830495 22 10.567975616213667 27.185241868304306 35.95123242733619 26.295550088145838 23 11.658820718469297 28.160980775812522 36.32706303234597 23.85313547337221 24 15.986200171771376 25.09024454819608 33.829759068043415 25.09379621198913 25 11.12994569183182 32.08040321070407 31.62821183414376 25.16143926332035 26 14.192448517018926 27.133581304041794 35.82111238109999 22.852857797839295 27 15.91000083948417 27.006851482335314 33.79860129022259 23.28454638795792 28 11.545006037828449 25.08701576292967 38.561705315226305 24.806272884015577 29 20.69877370735582 22.42165352551063 32.91617427691354 23.96339849022001 30 16.846187127478903 27.161994614386174 32.97881271108184 23.013005547053087 31 16.323769671374237 26.984088546207147 30.686052293406174 26.006089489012446 32 20.400756827266445 27.158281511329808 30.23499099168911 22.205970669714638 33 15.097154148666188 22.287013179901457 35.32161930038681 27.294213371045544 34 18.629768108642168 20.76851546911021 33.760985941868945 26.84073048037867 35 18.673841027528624 20.27531851966653 33.08261815739682 27.968222295408022 36 18.480113911544198 21.04506092717798 37.24129358052913 23.23353158074869 37 17.19747896446399 21.57280587897221 37.975519350110105 23.254195806453694 38 17.79254408906281 22.983946479655422 36.889840304280725 22.33366912700104 39 22.13251580490388 19.82312714310622 36.0932989790581 21.9510580729318 40 19.428408144287957 18.483342696810606 37.593069735304184 24.495179423597254 41 16.64503380538174 21.636412948720434 33.83072770362334 27.887825542274484 42 18.707097515772617 18.199371032630104 40.19030460360204 22.90322684799525 43 22.649605765318974 18.287516870403017 36.46557792027483 22.597299444003177 44 20.37686381629503 18.41795979516586 33.90902574633372 27.29615064220539 45 21.614618648172186 16.201398709777408 33.01465222753895 29.169330414511453 46 24.10917814499829 18.81929780378026 35.05798898338467 22.013535067836777 47 14.705825374377651 18.934888316317636 43.77054314625751 22.588743163047198 48 17.15695770937058 18.254098942895705 38.25190336891455 26.33703997881917 49 19.530922076496378 14.542933157687415 43.61992031357963 22.306224452236577 50 19.940170609013478 14.291087906907663 37.75047301704153 28.018268467037334 51 18.17547802165869 14.35727800486901 32.88065763898306 34.58658633448924 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6111.0 1 6334.5 2 6558.0 3 11574.0 4 16590.0 5 10795.0 6 5000.0 7 5052.0 8 5104.0 9 5458.0 10 5812.0 11 6294.0 12 6776.0 13 6759.0 14 6742.0 15 6336.5 16 5931.0 17 5503.5 18 5076.0 19 5263.5 20 5451.0 21 5595.5 22 5740.0 23 5579.5 24 5419.0 25 5749.0 26 6446.0 27 6813.0 28 7166.5 29 7520.0 30 8065.5 31 8611.0 32 8942.5 33 9274.0 34 10015.5 35 10757.0 36 11212.0 37 11667.0 38 12502.0 39 13337.0 40 15838.0 41 18339.0 42 24038.5 43 29738.0 44 36313.5 45 42889.0 46 68046.5 47 93204.0 48 94062.5 49 94921.0 50 90449.5 51 85978.0 52 64517.0 53 43056.0 54 31898.0 55 20740.0 56 15659.5 57 10579.0 58 8342.0 59 6105.0 60 5299.0 61 4493.0 62 3824.5 63 3156.0 64 2701.0 65 2246.0 66 1835.0 67 1424.0 68 1140.5 69 857.0 70 658.5 71 460.0 72 417.5 73 375.0 74 319.0 75 187.0 76 111.0 77 95.0 78 79.0 79 51.5 80 24.0 81 18.0 82 12.0 83 9.0 84 6.0 85 4.5 86 3.0 87 1.5 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 619428.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.84347540502487 #Duplication Level Percentage of deduplicated Percentage of total 1 69.06576891379436 23.374256515631302 2 11.677606634482288 7.904215858473131 3 5.447005449265405 5.530367848597505 4 3.1498661429256813 4.2640966934890345 5 2.099301982655104 3.552383750885398 6 1.4431857720173233 2.930545330809007 7 1.1731150818144636 2.7791603993056073 8 0.9254302061035207 2.505581953546528 9 0.7416580912899476 2.259025863435813 >10 4.028507516008082 22.34737009195189 >50 0.14458698187568433 3.35610152387084 >100 0.0865587617232534 5.518166049652108 >500 0.008704233022450063 1.9517660688104586 >1k 0.0058028220149667084 4.294670902039582 >5k 0.0024178425062361284 5.776252171613713 >10k+ 4.8356850124722567E-4 1.6560389778880622 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10119 1.6336039055386582 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCG 8271 1.3352641469226447 No Hit GCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 7962 1.2853794145566555 TruSeq Adapter, Index 16 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTC 7387 1.1925518381474522 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGC 6485 1.0469336226324932 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5190 0.8378697766326352 No Hit CCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 4612 0.7445578824334709 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGCT 3632 0.5863474043795243 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCC 3209 0.5180585959950148 No Hit TCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 2564 0.41393027115338665 TruSeq Adapter, Index 16 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCT 2081 0.3359551069696559 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1806 0.2915593095565586 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTGTCTTT 1736 0.28025856112413383 No Hit ACTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 1627 0.26266168142221535 TruSeq Adapter, Index 13 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCT 1482 0.23925298824076405 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTA 1273 0.20551218220681017 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTC 1192 0.19243560187786152 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCG 1028 0.16595956269332351 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 982 0.15853335658058726 No Hit ACCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTG 925 0.1493313185713271 No Hit GCCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTG 872 0.14077503761534835 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGC 708 0.11429899843081036 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 682 0.11010157758448116 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 669 0.10800286716131657 No Hit CGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTG 661 0.10671135305475375 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 659 0.10638847452811304 No Hit GGCCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCT 652 0.10525839968487055 No Hit AGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTG 628 0.10138385736518207 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.2287852664070725E-4 0.0 0.0 0.6200882104134783 0.0 2 3.2287852664070725E-4 0.0 0.0 3.5024248177350716 0.0 3 3.2287852664070725E-4 0.0 0.0 4.507061353377632 0.0 4 3.2287852664070725E-4 0.0 0.0 6.048322000297048 0.0 5 3.2287852664070725E-4 0.0 0.0 10.46885190853497 0.0 6 3.2287852664070725E-4 0.0 0.0 12.218853522927605 0.0 7 3.2287852664070725E-4 0.0 0.0 14.442356496638835 0.0 8 3.2287852664070725E-4 0.0 0.0 17.46240079557269 0.0 9 3.2287852664070725E-4 0.0 0.0 18.55324589782832 0.0 10 3.2287852664070725E-4 0.0 0.0 22.988789657555035 0.0 11 3.2287852664070725E-4 0.0 0.0 27.86264101719651 0.0 12 3.2287852664070725E-4 0.0 0.0 32.56149221539872 0.0 13 3.2287852664070725E-4 0.0 0.0 33.97117986271205 0.0 14 3.2287852664070725E-4 0.0 0.0 34.55494423887845 0.0 15 4.8431778996106087E-4 0.0 0.0 35.825471241209634 0.0 16 4.8431778996106087E-4 0.0 0.0 38.05478602840039 0.0 17 4.8431778996106087E-4 0.0 0.0 41.017035071065564 0.0 18 4.8431778996106087E-4 0.0 0.0 43.901470388810324 0.0 19 4.8431778996106087E-4 0.0 0.0 46.166947570984846 0.0 20 4.8431778996106087E-4 0.0 0.0 47.887082921663215 0.0 21 4.8431778996106087E-4 0.0 0.0 49.78060404114764 0.0 22 4.8431778996106087E-4 0.0 0.0 51.62569338163596 0.0 23 4.8431778996106087E-4 0.0 0.0 53.33355934830198 0.0 24 0.002905906739766365 0.0 0.0 54.58245348934824 0.0 25 0.002905906739766365 0.0 0.0 55.522191441136016 0.0 26 0.002905906739766365 0.0 0.0 56.32309162646829 0.0 27 0.002905906739766365 0.0 0.0 57.02389946854195 0.0 28 0.002905906739766365 0.0 0.0 57.68289454141563 0.0 29 0.002905906739766365 0.0 0.0 58.37482322400666 0.0 30 0.002905906739766365 0.0 0.0 59.05399820479539 0.0 31 0.002905906739766365 0.0 0.0 59.568828015524 0.0 32 0.002905906739766365 0.0 0.0 60.08850100415222 0.0 33 0.002905906739766365 0.0 0.0 60.54246821260905 0.0 34 0.002905906739766365 0.0 0.0 60.996112542539244 0.0 35 0.002905906739766365 0.0 0.0 61.42021348728181 0.0 36 0.002905906739766365 0.0 0.0 61.83382087990856 0.0 37 0.002905906739766365 0.0 0.0 62.218207765874325 0.0 38 0.002905906739766365 0.0 0.0 62.575957173392226 0.0 39 0.002905906739766365 0.0 0.0 62.932899384593526 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 40 6.8066583E-9 45.000004 3 CCTTCGA 25 3.8887145E-5 45.000004 41 CTTCGAA 20 7.0307637E-4 45.000004 42 AACGTAG 30 2.1638753E-6 45.000004 1 CTCACGG 20 7.0307637E-4 45.000004 2 TGCCCGT 20 7.0307637E-4 45.000004 31 ACCGGAC 20 7.0307637E-4 45.000004 4 GCGACCG 20 7.0307637E-4 45.000004 33 GACGTTG 25 3.8887145E-5 45.000004 1 GTCTACG 20 7.0307637E-4 45.000004 1 CGATTGA 20 7.0307637E-4 45.000004 10 CTAAGCG 20 7.0307637E-4 45.000004 1 ACGGGTA 30 2.1638753E-6 45.000004 5 TCGATAG 25 3.8887145E-5 45.000004 1 ACGGGGT 160 0.0 45.000004 5 TGTTGCG 40 6.8066583E-9 45.000004 1 TACGCAG 60 0.0 45.000004 1 GCTTACG 30 2.1638753E-6 45.000004 1 CGGGCTC 20 7.0307637E-4 45.000004 6 TCGCTAA 25 3.8887145E-5 45.000004 20 >>END_MODULE