##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935237.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 446583 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.737076870369002 31.0 31.0 34.0 30.0 34.0 2 31.850135361175862 33.0 31.0 34.0 30.0 34.0 3 31.84047310354402 33.0 31.0 34.0 30.0 34.0 4 35.61544214625277 37.0 35.0 37.0 33.0 37.0 5 33.146774507762274 37.0 35.0 37.0 28.0 37.0 6 34.11198142338602 37.0 35.0 37.0 28.0 37.0 7 35.38392863140783 37.0 35.0 37.0 32.0 37.0 8 35.28908176083729 37.0 35.0 37.0 33.0 37.0 9 37.35548599028624 39.0 37.0 39.0 34.0 39.0 10 36.86751622878614 39.0 37.0 39.0 32.0 39.0 11 36.670901041911584 39.0 37.0 39.0 32.0 39.0 12 36.94072994269822 39.0 37.0 39.0 33.0 39.0 13 36.8667213037666 39.0 37.0 39.0 33.0 39.0 14 37.81876381322173 40.0 37.0 41.0 33.0 41.0 15 37.94721697870273 40.0 37.0 41.0 33.0 41.0 16 37.98836274555906 40.0 37.0 41.0 33.0 41.0 17 37.898010000380665 40.0 37.0 41.0 33.0 41.0 18 37.78021554783769 39.0 37.0 40.0 33.0 41.0 19 37.55065463754778 39.0 36.0 40.0 33.0 41.0 20 37.246050566188146 39.0 35.0 40.0 32.0 41.0 21 37.20298578315789 39.0 35.0 40.0 33.0 41.0 22 37.216150189326505 39.0 35.0 40.0 33.0 41.0 23 36.951390894861646 39.0 35.0 40.0 32.0 41.0 24 36.66878945235264 38.0 35.0 40.0 31.0 41.0 25 36.49544653513457 38.0 35.0 40.0 31.0 41.0 26 36.72766092753195 38.0 35.0 40.0 32.0 41.0 27 36.57275131386551 38.0 35.0 40.0 31.0 41.0 28 36.607665316413744 38.0 35.0 40.0 31.0 41.0 29 36.63267074653536 39.0 35.0 40.0 31.0 41.0 30 36.32536169088389 38.0 35.0 40.0 31.0 41.0 31 36.190443881652456 38.0 35.0 40.0 30.0 41.0 32 35.83310605195451 38.0 35.0 40.0 29.0 41.0 33 35.61389260227102 38.0 35.0 40.0 27.0 41.0 34 35.393895423695035 38.0 35.0 40.0 25.0 41.0 35 35.090737891948415 38.0 35.0 40.0 24.0 41.0 36 34.920404493677545 38.0 35.0 40.0 23.0 41.0 37 34.81733742663738 38.0 35.0 40.0 22.0 41.0 38 34.730388304077856 38.0 34.0 40.0 22.0 41.0 39 34.66041922778073 38.0 34.0 40.0 21.0 41.0 40 34.53670426326125 38.0 34.0 40.0 21.0 41.0 41 34.411932384349605 38.0 34.0 40.0 20.0 41.0 42 34.44333752068484 38.0 34.0 40.0 20.0 41.0 43 34.337552034000396 38.0 34.0 40.0 19.0 41.0 44 34.27893135206669 38.0 34.0 40.0 18.0 41.0 45 34.256514466515746 38.0 34.0 40.0 20.0 41.0 46 34.12262446174619 38.0 34.0 40.0 20.0 41.0 47 33.98819480365352 37.0 33.0 40.0 20.0 41.0 48 33.94795368386168 37.0 33.0 40.0 20.0 41.0 49 33.990129494405295 37.0 33.0 40.0 20.0 41.0 50 33.89776368558588 37.0 33.0 40.0 18.0 41.0 51 32.929088209806466 36.0 32.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 10.0 10 17.0 11 16.0 12 21.0 13 21.0 14 46.0 15 59.0 16 98.0 17 141.0 18 273.0 19 530.0 20 924.0 21 1620.0 22 2560.0 23 3516.0 24 4769.0 25 6445.0 26 8082.0 27 8929.0 28 9136.0 29 9196.0 30 9665.0 31 11302.0 32 13857.0 33 19322.0 34 28197.0 35 37628.0 36 46976.0 37 60831.0 38 86648.0 39 75729.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.04440160059832 20.99497741741177 22.47174657342532 19.488874408564588 2 38.00144653961301 24.88518371724853 22.499960813555376 14.61340892958308 3 26.26880109632476 25.629950087665677 34.97804439488292 13.123204421126644 4 23.443346477586473 24.167959819339295 37.60219264951868 14.786501053555554 5 21.046031756694724 31.382520158626726 32.15012662819677 15.421321456481774 6 20.39665638862205 34.16274242414064 33.59196386785883 11.84863731937848 7 64.27808492486278 7.396161519807068 23.650026982666155 4.675726572663984 8 62.78161058526634 9.162910366046177 22.14168474841183 5.913794300275649 9 57.734396517556654 8.794781709111184 23.903731221295928 9.56709055203624 10 32.710380825064995 23.278987332701874 30.285075786583903 13.72555605564923 11 22.971093839219137 22.54384963153546 35.61465617813486 18.870400351110543 12 20.458011164777883 19.693315688237124 40.622235956138056 19.226437190846944 13 21.097757863599824 21.253607951937266 42.854967609604486 14.793666574858424 14 16.748734277838608 24.251482927025883 41.09426467196467 17.905518123170832 15 14.239906131670931 23.053273411661436 43.7361028073169 18.97071764935074 16 16.558624040771814 23.826254022208637 38.598871878239876 21.01625005877967 17 17.04923832747776 24.93175960571719 37.33975543180103 20.67924663500402 18 16.80314745523229 23.268686895828992 40.71919441626753 19.208971232671193 19 16.833600920769488 24.783746806304762 38.60626132208346 19.776390950842284 20 17.262412586238167 26.4824232001666 39.18666854761601 17.068495665979224 21 16.755228031519337 26.332171175347025 39.95584247497106 16.95675831816258 22 15.600907334134975 23.082607264495067 39.12016355302374 22.19632184834622 23 15.414155935178902 24.713659051061057 39.2930317544555 20.57915325930454 24 16.62915964109695 24.52018997588354 37.604879720007254 21.24577066301225 25 15.676369230355835 27.43454184328557 35.23130078843126 21.657788137927326 26 15.841176220321868 25.292946663890024 37.840670155379854 21.025206960408255 27 17.323767362394 25.938067503689123 37.42171108170262 19.316454052214258 28 14.13152762196501 24.965124064283685 37.706540553491735 23.19680776025957 29 17.76735791554985 24.39233020513544 36.52691660900661 21.313395270308096 30 18.3417192324831 27.810955634227007 34.886907920812035 18.96041721247786 31 17.02415900291771 28.236184539044253 31.385431151656018 23.354225306382016 32 18.345301993134537 30.04883750612988 30.57841431492018 21.0274461858154 33 17.750115879914823 26.62730108400902 31.95441832761211 23.668164708464047 34 17.858942234702173 24.965124064283685 31.462684428202596 25.71324927281155 35 18.20042410929211 29.39498368724291 29.888508966978144 22.516083236486832 36 18.788892546290388 28.523477158781237 29.708699166784225 22.978931128144154 37 16.275362026767702 29.559566754668225 30.660593887362488 23.50447733120159 38 16.354406683639997 29.454323160532308 30.034954308605567 24.156315847222128 39 18.174896939650637 26.129297353459492 31.635552629634354 24.060253077255517 40 19.197999028176174 25.052229932621707 32.931392372750416 22.8183786664517 41 17.682491272618975 27.718251702371116 28.257009335330725 26.342247689679187 42 18.262226730529374 26.825472532541543 30.880485822344333 24.03181491458475 43 18.966239198536442 25.402444786299522 31.456638519603295 24.174677495560736 44 18.52802278635774 24.614237442983722 31.447457695433993 25.41028207522454 45 19.287791967002775 23.246070719216807 31.241896803057884 26.22424051072253 46 20.69201021982476 25.230024429949193 31.683919898428737 22.394045451797314 47 15.671219011919396 26.420620578929338 34.99551035305867 22.912650056092595 48 16.459426355235195 25.71526457567798 33.15531491346513 24.669994155621687 49 19.27704368504847 22.500408658636808 34.97289417644648 23.249653479868243 50 18.346645528378826 21.721829984571738 33.801107520886376 26.130416966163068 51 17.199042507215903 22.186021411473345 31.133070448270534 29.481865633040215 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3122.0 1 4705.5 2 6289.0 3 13249.0 4 20209.0 5 12941.5 6 5674.0 7 5459.5 8 5245.0 9 5636.0 10 6027.0 11 5919.0 12 5811.0 13 5453.0 14 5095.0 15 4900.5 16 4706.0 17 4543.5 18 4381.0 19 4030.5 20 3680.0 21 3783.5 22 3887.0 23 4376.5 24 4866.0 25 4716.5 26 4866.5 27 5166.0 28 5529.0 29 5892.0 30 5822.0 31 5752.0 32 6705.0 33 7658.0 34 8347.0 35 9036.0 36 9618.0 37 10200.0 38 10586.0 39 10972.0 40 12322.5 41 13673.0 42 17039.5 43 20406.0 44 22772.5 45 25139.0 46 34200.5 47 43262.0 48 44721.0 49 46180.0 50 45634.5 51 45089.0 52 37273.5 53 29458.0 54 24401.5 55 19345.0 56 17109.0 57 14873.0 58 13487.5 59 12102.0 60 11282.5 61 10463.0 62 9333.0 63 8203.0 64 7168.5 65 6134.0 66 5335.0 67 4536.0 68 3919.0 69 3302.0 70 2887.0 71 2472.0 72 2110.5 73 1749.0 74 1325.0 75 694.5 76 488.0 77 389.0 78 290.0 79 209.5 80 129.0 81 104.5 82 80.0 83 53.5 84 27.0 85 26.5 86 26.0 87 19.0 88 12.0 89 6.5 90 1.0 91 2.5 92 4.0 93 2.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 446583.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.897855496163395 #Duplication Level Percentage of deduplicated Percentage of total 1 74.36381614373812 31.900482390773412 2 9.98344786535952 8.565370077633471 3 4.073741771124263 5.2426435747912015 4 2.4324057717602243 4.173799652200156 5 1.6817737189458055 3.607224298629124 6 1.3200587815193738 3.3976614513635774 7 1.0359883161607497 3.1109173957664233 8 0.8485735970890443 2.9121590036628326 9 0.7384714818321252 2.851095862410494 >10 3.4115706799967187 21.489751949579563 >50 0.06704896585377505 2.0053901914971335 >100 0.03352448292688689 2.6582548412047564 >500 0.004257077197065001 1.3265022655423648 >1k 0.004789211846698127 3.8112685984332 >5k 0.0 0.0 >10k+ 5.321346496331252E-4 2.947478446512307 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12912 2.891287845708413 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCC 2490 0.5575671263796428 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGC 2370 0.5306964214938769 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCG 2260 0.5060649420152581 No Hit GAATCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTC 2097 0.46956556787875936 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1973 0.4417991728301346 No Hit GCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGC 1866 0.41783946097366 No Hit CCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGC 1573 0.3522301565442482 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1054 0.23601435791331063 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1013 0.22683353374400728 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 822 0.18406432846749654 No Hit CTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGCT 814 0.1822729481417788 TruSeq Adapter, Index 13 (95% over 22bp) GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 773 0.17309212397247545 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCG 753 0.16861367315818113 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 730 0.16346345472174265 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACATCACT 727 0.16279168709959851 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 670 0.1500281022788597 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGC 522 0.11688756625308173 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCT 466 0.10434790397305764 No Hit TCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGC 462 0.10345221381019877 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.956901628588639E-4 0.0 0.0 0.19749968091037948 0.0 2 8.956901628588639E-4 0.0 0.0 1.2120927128887575 0.0 3 8.956901628588639E-4 0.0 0.0 1.6671033156210604 0.0 4 8.956901628588639E-4 0.0 0.0 2.327226965648043 0.0 5 8.956901628588639E-4 0.0 0.0 4.496140695010782 0.0 6 8.956901628588639E-4 0.0 0.0 5.628516983405101 0.0 7 8.956901628588639E-4 0.0 0.0 6.907338613426844 0.0 8 8.956901628588639E-4 0.0 0.0 8.726261411652482 0.0 9 8.956901628588639E-4 0.0 0.0 9.394446273145194 0.0 10 8.956901628588639E-4 0.0 0.0 11.590678552475127 0.0 11 8.956901628588639E-4 0.0 0.0 14.664911113947463 0.0 12 8.956901628588639E-4 0.0 0.0 17.324439130016145 0.0 13 8.956901628588639E-4 0.0 0.0 18.16549219294062 0.0 14 8.956901628588639E-4 0.0 0.0 18.531381624468462 0.0 15 8.956901628588639E-4 0.0 0.0 19.272789156774888 0.0 16 8.956901628588639E-4 0.0 0.0 20.669394043212574 0.0 17 8.956901628588639E-4 0.0 0.0 22.29551953388284 0.0 18 8.956901628588639E-4 0.0 0.0 23.989493554389664 0.0 19 8.956901628588639E-4 0.0 0.0 25.257790824997816 0.0 20 8.956901628588639E-4 0.0 0.0 26.31918366798557 0.0 21 8.956901628588639E-4 0.0 0.0 27.528141465304323 0.0 22 8.956901628588639E-4 0.0 0.0 28.804052102296772 0.0 23 8.956901628588639E-4 0.0 0.0 29.848202909649494 0.0 24 8.956901628588639E-4 0.0 0.0 30.595656350555217 0.0 25 8.956901628588639E-4 0.0 0.0 31.217713168660698 0.0 26 8.956901628588639E-4 0.0 0.0 31.77953482331392 0.0 27 8.956901628588639E-4 0.0 0.0 32.34964161197359 0.0 28 8.956901628588639E-4 0.0 0.0 32.83936020851667 0.0 29 8.956901628588639E-4 0.0 0.0 33.32571996694903 0.0 30 8.956901628588639E-4 0.0 0.0 33.820140936847125 0.0 31 8.956901628588639E-4 0.0 0.0 34.21245322817931 0.0 32 8.956901628588639E-4 0.0 0.0 34.56781830029356 0.0 33 8.956901628588639E-4 0.0 0.0 34.889818913841324 0.0 34 8.956901628588639E-4 0.0 0.0 35.249662436769874 0.0 35 8.956901628588639E-4 0.0 0.0 35.63033075598489 0.0 36 8.956901628588639E-4 0.0 0.0 35.93777640438619 0.0 37 8.956901628588639E-4 0.0 0.0 36.26850999702183 0.0 38 8.956901628588639E-4 0.0 0.0 36.6120071744782 0.0 39 8.956901628588639E-4 0.0 0.0 37.02021796620113 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGGG 50 2.1827873E-11 45.0 3 CGTATGG 45 3.8380676E-10 45.0 2 TTTCGAC 40 6.7993824E-9 45.0 18 CGCATGT 20 7.0286496E-4 45.0 38 GACCCGA 20 7.0286496E-4 45.0 38 ATCGTAG 25 3.886962E-5 45.0 1 ACGATAG 25 3.886962E-5 45.0 1 TCTACGG 25 3.886962E-5 45.0 2 ACTACGG 20 7.0286496E-4 45.0 2 ACCACGT 20 7.0286496E-4 45.0 9 TAGTGCG 20 7.0286496E-4 45.0 1 CGAAGTG 25 3.886962E-5 45.0 37 CGTTAGG 30 2.1625092E-6 44.999996 2 CGTTATT 335 0.0 43.656715 1 CCGATGA 330 0.0 43.636364 18 CGTTTTT 4240 0.0 42.346695 1 AGGGCAT 130 0.0 41.53846 6 TGCGCGG 60 3.6379788E-12 41.249996 2 TAATACG 55 6.002665E-11 40.909092 4 CGAAAGG 45 1.9237632E-8 40.0 2 >>END_MODULE