##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935234.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 562405 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.475283825712786 31.0 31.0 34.0 30.0 34.0 2 31.55668068384883 31.0 31.0 34.0 30.0 34.0 3 31.599130519821124 31.0 31.0 34.0 30.0 34.0 4 35.46108765035873 37.0 35.0 37.0 33.0 37.0 5 32.898587316969085 35.0 35.0 37.0 28.0 37.0 6 33.905146646989266 36.0 35.0 37.0 26.0 37.0 7 35.20139401321112 37.0 35.0 37.0 32.0 37.0 8 34.97167343818067 37.0 35.0 37.0 32.0 37.0 9 36.98717827899823 39.0 37.0 39.0 33.0 39.0 10 36.673717338928356 39.0 35.0 39.0 32.0 39.0 11 36.533281176376455 39.0 35.0 39.0 32.0 39.0 12 36.8510468434669 39.0 37.0 39.0 33.0 39.0 13 36.74205776975667 39.0 35.0 39.0 33.0 39.0 14 37.548942488064654 39.0 36.0 41.0 32.0 41.0 15 37.662526115521736 39.0 37.0 41.0 32.0 41.0 16 37.72344307038522 39.0 37.0 41.0 33.0 41.0 17 37.61201269547746 39.0 36.0 41.0 32.0 41.0 18 37.546001546927926 39.0 36.0 40.0 33.0 41.0 19 37.384167992816565 39.0 36.0 40.0 32.0 41.0 20 37.068011486384364 39.0 35.0 40.0 32.0 41.0 21 37.08900703229879 39.0 35.0 40.0 32.0 41.0 22 37.127143250860144 39.0 35.0 40.0 32.0 41.0 23 36.778846205136865 39.0 35.0 40.0 31.0 41.0 24 36.51890541513678 38.0 35.0 40.0 31.0 41.0 25 36.32254691903521 38.0 35.0 40.0 30.0 41.0 26 36.680650065344366 38.0 35.0 40.0 31.0 41.0 27 36.51687129381851 38.0 35.0 40.0 31.0 41.0 28 36.65756705576942 39.0 35.0 40.0 31.0 41.0 29 36.804880824316996 39.0 35.0 40.0 32.0 41.0 30 36.535598012108714 39.0 35.0 40.0 31.0 41.0 31 36.40937224953548 39.0 35.0 40.0 30.0 41.0 32 36.11689796498964 39.0 35.0 40.0 30.0 41.0 33 35.952856037908624 39.0 35.0 40.0 29.0 41.0 34 35.7639494670211 39.0 35.0 40.0 27.0 41.0 35 35.64021123567536 39.0 35.0 40.0 27.0 41.0 36 35.451370453676624 39.0 35.0 40.0 25.0 41.0 37 35.45469545967764 39.0 35.0 40.0 25.0 41.0 38 35.37519758892613 39.0 35.0 40.0 25.0 41.0 39 35.24988931463981 38.0 35.0 40.0 24.0 41.0 40 35.126245321432066 38.0 35.0 40.0 24.0 41.0 41 34.826888096656326 38.0 34.0 40.0 23.0 41.0 42 35.040965140779335 38.0 35.0 40.0 23.0 41.0 43 34.99104026457802 38.0 35.0 40.0 23.0 41.0 44 35.01406104142033 38.0 35.0 40.0 23.0 41.0 45 35.025106462424766 38.0 35.0 40.0 23.0 41.0 46 34.887132938007305 38.0 35.0 40.0 23.0 41.0 47 34.73290066766832 38.0 34.0 40.0 23.0 41.0 48 34.70057343017932 38.0 34.0 40.0 22.0 41.0 49 34.771760564006364 38.0 34.0 40.0 23.0 41.0 50 34.678959113094656 38.0 34.0 40.0 22.0 41.0 51 33.66159795876637 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 6.0 10 17.0 11 15.0 12 21.0 13 21.0 14 36.0 15 58.0 16 94.0 17 176.0 18 292.0 19 542.0 20 1102.0 21 1911.0 22 3023.0 23 4219.0 24 5603.0 25 7105.0 26 8638.0 27 9494.0 28 9557.0 29 10237.0 30 11664.0 31 14129.0 32 18499.0 33 24728.0 34 35675.0 35 47036.0 36 60884.0 37 80868.0 38 119227.0 39 87508.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.377628221655215 19.883002462638135 19.61220117175345 16.127168143953202 2 33.66719712662583 30.55271556974067 20.536801770965763 15.243285532667738 3 24.570905308452094 31.083649683057583 31.265013646749228 13.080431361741093 4 22.5728789751158 21.888496723891144 40.15558183159823 15.38304246939483 5 22.643646482517045 29.260408424533924 30.597523137240955 17.498421955708075 6 18.30140201456246 34.59695415225683 33.86563063984139 13.23601319333932 7 56.620584809879006 7.931650678781306 29.0708653016954 6.3768992096442965 8 51.540793556245056 13.572603373014108 24.777517980814537 10.1090850899263 9 46.59649185195722 9.310728034067976 26.733581671571198 17.359198442403606 10 28.979827704234495 22.223486633298066 33.68640036984024 15.110285292627198 11 20.92335594455953 21.86982690409936 36.4150389843618 20.791778166979313 12 18.38550510752927 18.322383335852276 42.02949831527103 21.262613241347427 13 20.13300024004054 21.393301979889937 44.75742569856243 13.7162720815071 14 14.8233034912563 27.281585334412036 37.74201865203901 20.153092522292653 15 11.12579013344476 24.083711915790225 45.46403392572968 19.32646402503534 16 12.64604688791885 26.31022128181649 35.27386847556476 25.769863354699908 17 12.844658208941956 27.46775010890728 37.13107102532872 22.55652065682204 18 12.77051235319743 24.998533085587788 41.192556965176344 21.03839759603844 19 12.341462113601407 26.91032263226678 36.469448173469296 24.27876708066251 20 13.571892141783945 29.052906713133776 40.485059698971384 16.8901414461109 21 14.101759408255615 30.580275779909492 38.67942141339426 16.638543398440625 22 11.249722175300718 25.351481583556335 37.12218063495168 26.276615606191267 23 12.640179230270002 27.19072554475867 37.878752856037906 22.29034236893342 24 17.253936220339437 24.28765747103955 33.817978147420455 24.64042816120056 25 11.802704456752695 31.867248690890015 31.766965087436986 24.563081764920298 26 12.071194246139347 24.511161885118376 36.93708270730168 26.480561161440598 27 16.9201909655853 24.88704759025969 33.268729829926826 24.92403161422818 28 9.455819205021292 24.508139152390182 37.912002916048046 28.124038726540483 29 14.093046825686114 20.52808918839626 33.34340910909398 32.03545487682364 30 14.542722770956873 26.117299810634687 34.00343169068554 25.336545727722903 31 13.543976316000036 27.541895964651808 31.80768307536384 27.106444643984318 32 17.553897991660815 25.97700945048497 27.70352326170642 28.765569296147792 33 14.548234812990637 25.071434286679526 32.29718796952375 28.083142930806094 34 14.60833385193944 25.683804375850144 31.615828451027284 28.092033321183134 35 17.28931997404006 23.51045954427859 26.633298068118172 32.566922413563184 36 14.878068295978878 28.719339266187177 30.749371004880828 25.65322143295312 37 14.065308807709748 25.58938843004596 33.83629235159716 26.509010410647132 38 15.877170366550795 25.323565757772425 32.163298690445494 26.635965185231285 39 18.05869435726923 26.492829900160913 31.790435718032377 23.658040024537478 40 20.788222010828495 23.270774619713553 33.592873463073765 22.34812990638419 41 18.258728140752662 30.938558512104265 25.16051599825748 25.64219734888559 42 20.03449471466292 23.75156693130395 32.374534365804 23.839403988229122 43 20.04676345338324 23.302246601648278 30.66473448849139 25.986255456477092 44 17.72690498839804 20.500706786034975 31.907077639779164 29.865310585787824 45 18.70467012206506 17.746641655035074 31.337381424418346 32.21130679848152 46 23.56486873338608 22.42565411047199 30.923978271885915 23.08549888425601 47 13.778860429761473 22.837456992736552 40.54853708626346 22.83514549123852 48 17.230287781936504 22.955699184751204 32.49882202327504 27.31519101003725 49 19.087312523892923 18.26103964225069 39.54552324392564 23.106124589930744 50 19.136920902196817 18.059761204114473 34.94296814573128 27.86034974795743 51 17.68351988335808 18.180314897627156 29.783341186511496 34.352824032503264 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4339.0 1 5415.0 2 6491.0 3 12615.5 4 18740.0 5 12202.5 6 5665.0 7 5723.0 8 5781.0 9 5789.5 10 5798.0 11 6046.5 12 6295.0 13 5952.0 14 5609.0 15 5365.5 16 5122.0 17 5107.0 18 5092.0 19 5204.5 20 5317.0 21 5211.0 22 5105.0 23 4765.0 24 4425.0 25 4754.0 26 4976.5 27 4870.0 28 5032.5 29 5195.0 30 5865.0 31 6535.0 32 6994.5 33 7454.0 34 8179.5 35 8905.0 36 9051.0 37 9197.0 38 9954.5 39 10712.0 40 12772.0 41 14832.0 42 19239.0 43 23646.0 44 29276.5 45 34907.0 46 61507.5 47 88108.0 48 83369.0 49 78630.0 50 76260.5 51 73891.0 52 56504.0 53 39117.0 54 30593.5 55 22070.0 56 17781.5 57 13493.0 58 11399.5 59 9306.0 60 8015.5 61 6725.0 62 5968.5 63 5212.0 64 4427.0 65 3642.0 66 3157.5 67 2673.0 68 2173.5 69 1674.0 70 1366.0 71 1058.0 72 924.5 73 791.0 74 621.0 75 322.5 76 194.0 77 164.5 78 135.0 79 99.5 80 64.0 81 45.5 82 27.0 83 20.0 84 13.0 85 9.5 86 6.0 87 7.0 88 8.0 89 4.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 562405.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.73591224217561 #Duplication Level Percentage of deduplicated Percentage of total 1 72.53708826990906 27.372531972562342 2 11.100903080539421 8.378054089122648 3 4.8330686440928305 5.471407626416931 4 2.68174159585142 4.047918620689646 5 1.8731177927006963 3.5341904322305577 6 1.4207253767878611 3.216742088321916 7 1.0458248253733666 2.762560768168459 8 0.8330094948761609 2.514749855643667 9 0.6683481683171532 2.269865504415141 >10 2.824201305870247 16.90677064196903 >50 0.09456783791366737 2.4980225427057476 >100 0.0716423014492948 5.404632178049216 >500 0.006686614801934181 1.7961971616513317 >1k 0.006686614801934181 5.4413996094135415 >5k 9.552306859905974E-4 2.6074236742534436 >10k+ 0.0014328460289858961 5.777533234386423 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11609 2.064170837741485 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCG 10340 1.838532729972173 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTC 10107 1.7971035108151598 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGC 7324 1.3022643824290323 No Hit GCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 7143 1.2700811692641425 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 3748 0.6664236626630275 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCC 3484 0.6194824014722486 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3206 0.5700518309758982 No Hit CTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGCT 3045 0.5414247739618246 Illumina Single End Adapter 1 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCT 2645 0.47030165094549303 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTCTAGAT 2245 0.39917852792916136 No Hit GAACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCT 2065 0.3671731225718121 No Hit TCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 1939 0.34476933882166766 Illumina Single End Adapter 1 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTC 1749 0.3109858553889101 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTA 1538 0.2734684079977952 No Hit ACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 1294 0.23008330295783289 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCG 1140 0.2027009005965452 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1061 0.18865408380081972 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1032 0.18349765738213564 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGC 914 0.1625163360923178 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 838 0.1490029427192148 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCG 788 0.14011255234217335 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 771 0.13708981961397926 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 761 0.13531174153857095 No Hit ACCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 760 0.1351339337310301 No Hit GCCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 740 0.13157777758021355 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTC 704 0.1251766965087437 No Hit AGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 695 0.12357642624087624 No Hit CGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 680 0.1209093091277638 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTT 633 0.11255234217334484 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGT 579 0.10295072056614005 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 564 0.10028360345302761 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5561561508165823E-4 0.0 0.0 0.5748526417795006 0.0 2 3.5561561508165823E-4 0.0 0.0 3.259928343453561 0.0 3 3.5561561508165823E-4 0.0 0.0 4.220623927596661 0.0 4 3.5561561508165823E-4 0.0 0.0 5.8288955468034604 0.0 5 3.5561561508165823E-4 0.0 0.0 10.967541184733422 0.0 6 3.5561561508165823E-4 0.0 0.0 12.927872262871063 0.0 7 3.5561561508165823E-4 0.0 0.0 15.370240307251892 0.0 8 3.5561561508165823E-4 0.0 0.0 18.37803717961256 0.0 9 3.5561561508165823E-4 0.0 0.0 19.33162045145402 0.0 10 3.5561561508165823E-4 0.0 0.0 23.98218365768441 0.0 11 3.5561561508165823E-4 0.0 0.0 28.27802028787084 0.0 12 3.5561561508165823E-4 0.0 0.0 32.8466140948249 0.0 13 3.5561561508165823E-4 0.0 0.0 34.156879828593276 0.0 14 3.5561561508165823E-4 0.0 0.0 34.7253313893013 0.0 15 3.5561561508165823E-4 0.0 0.0 36.08467207795094 0.0 16 3.5561561508165823E-4 0.0 0.0 38.00552982281452 0.0 17 3.5561561508165823E-4 0.0 0.0 40.16607249224313 0.0 18 3.5561561508165823E-4 0.0 0.0 42.29727687342751 0.0 19 3.5561561508165823E-4 0.0 0.0 44.21013326695175 0.0 20 3.5561561508165823E-4 0.0 0.0 45.75279380517598 0.0 21 3.5561561508165823E-4 0.0 0.0 47.377779358291626 0.0 22 3.5561561508165823E-4 0.0 0.0 49.0660644908918 0.0 23 3.5561561508165823E-4 0.0 0.0 50.40655755194211 0.0 24 3.5561561508165823E-4 0.0 0.0 51.38716761052978 0.0 25 3.5561561508165823E-4 0.0 0.0 52.149251873649774 0.0 26 3.5561561508165823E-4 0.0 0.0 52.79949502582659 0.0 27 3.5561561508165823E-4 0.0 0.0 53.4301793191739 0.0 28 3.5561561508165823E-4 0.0 0.0 53.94208799708395 0.0 29 3.5561561508165823E-4 0.0 0.0 54.44030547381335 0.0 30 3.5561561508165823E-4 0.0 0.0 54.97728505258666 0.0 31 3.5561561508165823E-4 0.0 0.0 55.45256532214329 0.0 32 3.5561561508165823E-4 0.0 0.0 55.816893519794455 0.0 33 3.5561561508165823E-4 0.0 0.0 56.18175514086823 0.0 34 3.5561561508165823E-4 0.0 0.0 56.535059254451866 0.0 35 3.5561561508165823E-4 0.0 0.0 56.88427378846205 0.0 36 3.5561561508165823E-4 0.0 0.0 57.202549763960135 0.0 37 3.5561561508165823E-4 0.0 0.0 57.48864252629333 0.0 38 3.5561561508165823E-4 0.0 0.0 57.803006730025515 0.0 39 3.5561561508165823E-4 0.0 0.0 58.16217850125799 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 25 3.888256E-5 45.0 21 TCACGAC 20 7.0302107E-4 45.0 25 CGGGTAT 40 6.8048394E-9 45.0 6 TAGACGG 20 7.0302107E-4 45.0 2 GACACGA 25 3.888256E-5 45.0 25 GCGCCCA 20 7.0302107E-4 45.0 33 ACGGGTA 40 6.8048394E-9 45.0 5 ACGGGCG 20 7.0302107E-4 45.0 5 GTCAGGC 20 7.0302107E-4 45.0 3 ATCCGGC 35 1.2104465E-7 45.0 6 AACGGGC 25 3.888256E-5 45.0 4 ATCCATA 20 7.0302107E-4 45.0 20 TGTTACG 20 7.0302107E-4 45.0 1 ATGACGG 25 3.888256E-5 45.0 2 CATAAGG 45 3.8380676E-10 45.0 2 TTTGCGG 35 1.2104465E-7 45.0 2 CGCACGG 25 3.888256E-5 45.0 2 TGATGCG 20 7.0302107E-4 45.0 1 GCGTAAG 25 3.888256E-5 45.0 1 ATCGAAG 20 7.0302107E-4 45.0 1 >>END_MODULE