##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935232.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1406165 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33288981022853 31.0 31.0 34.0 30.0 34.0 2 31.414833963297337 31.0 31.0 34.0 30.0 34.0 3 31.49169051996032 31.0 31.0 34.0 30.0 34.0 4 35.40205665764686 37.0 35.0 37.0 33.0 37.0 5 32.864043693307686 35.0 35.0 37.0 28.0 37.0 6 33.82415719350147 35.0 35.0 37.0 26.0 37.0 7 35.15981197085691 36.0 35.0 37.0 32.0 37.0 8 34.93395654137317 36.0 35.0 37.0 32.0 37.0 9 36.87164664175257 39.0 37.0 39.0 33.0 39.0 10 36.59494013860393 38.0 35.0 39.0 32.0 39.0 11 36.47755064306109 39.0 35.0 39.0 32.0 39.0 12 36.802788435212086 39.0 35.0 39.0 33.0 39.0 13 36.66196072295926 39.0 35.0 39.0 32.0 39.0 14 37.313763320805165 39.0 36.0 40.0 32.0 41.0 15 37.45807071005181 39.0 36.0 40.0 32.0 41.0 16 37.49826371727358 39.0 36.0 40.0 32.0 41.0 17 37.518129095803125 39.0 36.0 40.0 32.0 41.0 18 37.51803735692469 39.0 36.0 40.0 33.0 41.0 19 37.45280745858416 39.0 36.0 40.0 32.0 41.0 20 37.22835229151629 39.0 35.0 40.0 32.0 41.0 21 37.21831861836982 39.0 35.0 40.0 32.0 41.0 22 37.277541398057835 39.0 35.0 40.0 32.0 41.0 23 36.86569001504091 39.0 35.0 40.0 31.0 41.0 24 36.65305991828839 39.0 35.0 40.0 31.0 41.0 25 36.305851731482434 38.0 35.0 40.0 30.0 41.0 26 36.6913555663809 38.0 35.0 40.0 31.0 41.0 27 36.603636130895026 38.0 35.0 40.0 31.0 41.0 28 36.63719264808895 38.0 35.0 40.0 31.0 41.0 29 36.8834375766713 39.0 35.0 40.0 32.0 41.0 30 36.69883975209168 39.0 35.0 40.0 31.0 41.0 31 36.507735578683864 38.0 35.0 40.0 31.0 41.0 32 36.43776654944477 38.0 35.0 40.0 30.0 41.0 33 36.372783421575704 39.0 35.0 40.0 30.0 41.0 34 36.3689439006091 39.0 35.0 40.0 30.0 41.0 35 36.334533287345366 39.0 35.0 40.0 30.0 41.0 36 36.248765969854176 39.0 35.0 40.0 30.0 41.0 37 36.24782866875509 39.0 35.0 40.0 30.0 41.0 38 36.175188544729814 39.0 35.0 40.0 30.0 41.0 39 36.110932927501395 39.0 35.0 40.0 30.0 41.0 40 35.97450370333496 39.0 35.0 40.0 29.0 41.0 41 35.79289983750129 39.0 35.0 40.0 28.0 41.0 42 35.993670728541815 39.0 35.0 40.0 29.0 41.0 43 35.924437032638416 39.0 35.0 40.0 29.0 41.0 44 35.8647960943417 39.0 35.0 40.0 29.0 41.0 45 35.914635195727385 39.0 35.0 40.0 29.0 41.0 46 35.77293631970644 39.0 35.0 40.0 28.0 41.0 47 35.71786027955468 39.0 35.0 40.0 28.0 41.0 48 35.72798569157958 39.0 35.0 40.0 28.0 41.0 49 35.88334157086828 39.0 35.0 40.0 29.0 41.0 50 35.81959016189423 39.0 35.0 40.0 28.0 41.0 51 34.697033420686765 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 14.0 10 25.0 11 22.0 12 24.0 13 39.0 14 52.0 15 76.0 16 119.0 17 273.0 18 450.0 19 892.0 20 1759.0 21 3282.0 22 5120.0 23 7397.0 24 9633.0 25 12287.0 26 15055.0 27 16956.0 28 19291.0 29 22482.0 30 27825.0 31 35810.0 32 47829.0 33 66338.0 34 91112.0 35 111289.0 36 155130.0 37 224839.0 38 337225.0 39 193494.0 40 23.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.39526655833419 21.105275696664332 19.83636344241252 12.663094302588956 2 30.428505900801117 31.966661095959576 21.53445719385705 16.070375809382256 3 25.088378675333267 32.59958824177817 28.8379386487361 13.474094434152464 4 24.42117390206697 21.127534819882445 37.610735582239634 16.840555695810945 5 23.805243339152945 27.47586520785256 28.520052767633953 20.19883868536054 6 19.430578914992193 33.46413827680251 32.62113621089986 14.484146597305436 7 59.628919792485235 6.050499052387166 26.46602639092852 7.85455476419908 8 52.519867867568884 12.060817898326299 23.15681303403228 12.262501200072538 9 47.17846056472747 7.503600217613153 24.470954688816747 20.846984528842633 10 30.113322405265386 19.12954738597533 32.555141110751585 18.2019890980077 11 20.67260954439913 19.33265299591442 35.05342545149396 24.941312008192497 12 19.70188420277848 14.927906753474876 42.89269040261989 22.477518641126753 13 20.064074984087927 19.093491873286563 46.581802277826576 14.26063086479894 14 14.75929211721242 25.721519167380784 36.884931711427896 22.63425700397891 15 10.212741747945655 22.799813677626737 47.3187712679522 19.668673306475416 16 11.381381274601488 26.93339686309928 32.717782052604065 28.96743980969516 17 11.43187321544769 26.184978292021206 35.45480082351644 26.928347669014663 18 11.423694943338797 25.120167263443477 40.73447995078814 22.721657842429586 19 11.142860190660413 26.62041794526247 34.04906252111239 28.187659342964732 20 11.569908225563855 30.124629755398548 39.742419986274726 18.56304203276287 21 12.60854878339313 30.446711445669607 38.36605234805304 18.578687422884226 22 9.18896431073167 24.2908193561922 34.6398893444226 31.880326988653536 23 11.00660306578531 26.927138707050734 37.0444435752561 25.021814651907846 24 18.994001415196653 22.13175551944473 30.601671923280698 28.272571142077922 25 11.15900338864927 32.603428473898866 28.30507088428456 27.932497253167305 26 11.286442202728699 22.865951008594298 34.87720146639975 30.970405322277255 27 17.864190902205646 22.79483559895176 33.18863717984731 26.152336318995285 28 8.879754509605913 21.275952679806423 34.97093157630861 34.87336123427905 29 14.975554077935376 17.42370205487976 33.80833685947239 33.79240700771247 30 14.710933638655494 23.342068676151094 37.87464486742309 24.07235281777032 31 11.955353745826415 22.259336564343446 27.385193060558326 38.400116629271814 32 14.198262650542432 21.55906312559337 36.14113564197658 28.101538581887613 33 12.151134468572323 16.991107018024202 35.70327806480748 35.154480448596004 34 11.70282292618576 14.802601401684722 32.33987476576362 41.154700906365896 35 10.028695067790764 15.19160269242941 40.98693965501915 33.79276258476068 36 12.290165094423486 15.702069102843549 32.75319752660605 39.25456827612691 37 10.397357351377682 15.67269843866118 44.13408099334004 29.795863216621093 38 11.632276439820362 17.51444531758364 37.76747394509179 33.085804297504204 39 18.177738743319598 13.517901526492269 36.62322700394335 31.681132726244787 40 16.584113528639953 13.269993208478379 42.61270903485722 27.53318422802445 41 13.57401158470023 18.812586005198536 29.180714923213134 38.43268748688809 42 14.967660267465055 13.627845949799633 40.82700109873308 30.577492684002234 43 20.460472277435436 13.396151945184243 33.494789018358446 32.64858675902188 44 18.302972979700105 13.142198817350737 33.41613537529379 35.13869282765536 45 17.74194351303012 10.010347292102988 34.36019243829849 37.887516756568395 46 23.799838568020114 14.944618874740872 34.26276432708821 26.992778230150797 47 11.224358450110762 14.209001077398456 46.75745733964364 27.809183132847142 48 15.790821134077436 14.06172106402876 35.68116117240864 34.46629662948516 49 17.68810914793072 9.504858960363826 44.363570420256515 28.443461471448938 50 17.88246756248378 8.808141292095877 39.03958639277752 34.26980475264283 51 17.0588088880039 9.280632073760902 31.162488043721755 42.49807099451345 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3849.0 1 5932.5 2 8016.0 3 16086.0 4 24156.0 5 15328.0 6 6500.0 7 6495.5 8 6491.0 9 6883.0 10 7275.0 11 7377.0 12 7479.0 13 7340.5 14 7202.0 15 7218.5 16 7235.0 17 6445.5 18 5656.0 19 5844.0 20 6032.0 21 6688.0 22 7344.0 23 6678.5 24 6013.0 25 6843.5 26 8174.0 27 8674.0 28 9158.0 29 9642.0 30 10348.0 31 11054.0 32 12284.0 33 13514.0 34 14446.5 35 15379.0 36 16511.0 37 17643.0 38 19893.5 39 22144.0 40 27447.0 41 32750.0 42 43401.5 43 54053.0 44 74774.0 45 95495.0 46 189447.5 47 283400.0 48 266579.5 49 249759.0 50 242147.0 51 234535.0 52 175194.0 53 115853.0 54 85549.0 55 55245.0 56 41073.0 57 26901.0 58 21548.5 59 16196.0 60 13252.5 61 10309.0 62 8700.0 63 7091.0 64 6139.5 65 5188.0 66 4249.0 67 3310.0 68 2837.5 69 2365.0 70 2047.0 71 1729.0 72 1474.5 73 1220.0 74 1024.0 75 652.0 76 476.0 77 361.5 78 247.0 79 180.5 80 114.0 81 105.5 82 97.0 83 58.0 84 19.0 85 12.0 86 5.0 87 4.0 88 3.0 89 2.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1406165.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.125224856917402 #Duplication Level Percentage of deduplicated Percentage of total 1 65.97795104468727 17.89666757685831 2 12.653613182814244 6.864642056725813 3 6.019930685017771 4.898759203624915 4 3.5421139688718406 3.8432255149790713 5 2.3721308732020896 3.2172291662821246 6 1.6915857843182145 2.7530786858637932 7 1.2912885260932236 2.45185441378053 8 0.9812465350550871 2.1293226322752252 9 0.7899093760115441 1.92838224968104 >10 4.2714127764557785 19.985441940205988 >50 0.23933763855860996 4.539727233697509 >100 0.13645003666961159 6.716498392444545 >500 0.017868457116001282 3.403743571589277 >1k 0.012183038942728147 5.864993346165096 >5k 0.0013536709936364608 2.77144876153116 >10k+ 0.0016244051923637527 10.734985254295646 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTC 37304 2.6528892413052523 RNA PCR Primer, Index 10 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCG 36734 2.612353457809005 No Hit GCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 23706 1.6858619009860152 RNA PCR Primer, Index 35 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGC 20954 1.4901522936497495 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15144 1.0769717636266014 No Hit CCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 12337 0.8773508087599962 RNA PCR Primer, Index 10 (95% over 24bp) CTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGCT 9763 0.6942997443401023 TruSeq Adapter, Index 10 (96% over 25bp) GAATGACTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCT 8976 0.6383319169514247 No Hit GAACTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCT 6838 0.4862871711356775 TruSeq Adapter, Index 10 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 6422 0.4567031607243816 RNA PCR Primer, Index 35 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTC 5740 0.40820245134817035 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTCTTCTCT 4690 0.33353127122350507 No Hit ACTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 4350 0.309352031945042 TruSeq Adapter, Index 10 (95% over 24bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTA 4349 0.30928091653539946 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCC 3957 0.2814036759555244 No Hit ACCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTG 3095 0.22010219284365634 TruSeq Adapter, Index 10 (95% over 23bp) GAATAATACCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCG 2683 0.1908026440709305 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTT 2674 0.19016260538414767 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2452 0.17437498444350413 No Hit GCCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTG 2442 0.17366383034707875 RNA PCR Primer, Index 35 (95% over 22bp) AGCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTG 2378 0.1691124441299563 TruSeq Adapter, Index 10 (95% over 23bp) GGGGCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTC 2164 0.15389374646645307 RNA PCR Primer, Index 10 (95% over 21bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCCTCTTCTCTC 2103 0.14955570647825825 No Hit CGCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTG 1992 0.1416618960079365 TruSeq Adapter, Index 10 (95% over 23bp) GAATATGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTC 1941 0.13803501011616703 RNA PCR Primer, Index 10 (95% over 21bp) GACCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCT 1657 0.11783823377768611 RNA PCR Primer, Index 10 (95% over 22bp) GGACCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTC 1615 0.1148513865726995 TruSeq Adapter, Index 10 (95% over 21bp) AGCCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCT 1615 0.1148513865726995 RNA PCR Primer, Index 10 (95% over 22bp) GCTGACTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 1574 0.11193565477735544 RNA PCR Primer, Index 10 (95% over 24bp) GGCCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCT 1490 0.1059619603673822 TruSeq Adapter, Index 10 (95% over 22bp) TGCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTG 1443 0.10261953611418291 TruSeq Adapter, Index 10 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.11154096425384E-5 0.0 0.0 0.739173567824544 0.0 2 7.11154096425384E-5 0.0 0.0 4.27325385001049 0.0 3 7.11154096425384E-5 0.0 0.0 5.574096923191802 0.0 4 7.11154096425384E-5 0.0 0.0 7.715524138347918 0.0 5 7.11154096425384E-5 0.0 0.0 15.27260314401226 0.0 6 7.11154096425384E-5 0.0 0.0 18.268695352252404 0.0 7 7.11154096425384E-5 0.0 0.0 21.75747511849605 0.0 8 7.11154096425384E-5 0.0 0.0 25.860336447003018 0.0 9 7.11154096425384E-5 0.0 0.0 27.162672943786824 0.0 10 1.422308192850768E-4 0.0 0.0 33.65188295825881 0.0 11 1.422308192850768E-4 0.0 0.0 39.20969445264247 0.0 12 1.422308192850768E-4 0.0 0.0 44.83563450946368 0.0 13 1.422308192850768E-4 0.0 0.0 46.61885340625033 0.0 14 1.422308192850768E-4 0.0 0.0 47.413212531957484 0.0 15 1.422308192850768E-4 0.0 0.0 49.05818307239904 0.0 16 1.422308192850768E-4 0.0 0.0 51.45676360882258 0.0 17 1.422308192850768E-4 0.0 0.0 54.25757290218431 0.0 18 2.1334622892761517E-4 0.0 0.0 57.03761649593042 0.0 19 2.844616385701536E-4 0.0 0.0 59.26566228003115 0.0 20 2.844616385701536E-4 0.0 0.0 61.2533379795401 0.0 21 2.844616385701536E-4 0.0 0.0 63.2895855038349 0.0 22 2.844616385701536E-4 0.0 0.0 65.40790021085719 0.0 23 2.844616385701536E-4 0.0 0.0 67.00316107995862 0.0 24 2.844616385701536E-4 0.0 0.0 68.09407146387515 0.0 25 2.844616385701536E-4 0.0 0.0 68.96295953888769 0.0 26 2.844616385701536E-4 0.0 0.0 69.66152620780633 0.0 27 2.844616385701536E-4 0.0 0.0 70.42509236113827 0.0 28 3.5557704821269196E-4 0.0 0.0 70.96521389737335 0.0 29 3.5557704821269196E-4 0.0 0.0 71.49566373789705 0.0 30 3.5557704821269196E-4 0.0 0.0 72.06366251471201 0.0 31 3.5557704821269196E-4 0.0 0.0 72.44661899563707 0.0 32 3.5557704821269196E-4 0.0 0.0 72.8117966241515 0.0 33 3.5557704821269196E-4 0.0 0.0 73.14824362717036 0.0 34 3.5557704821269196E-4 0.0 0.0 73.47060977907998 0.0 35 3.5557704821269196E-4 0.0 0.0 73.81246155323166 0.0 36 3.5557704821269196E-4 0.0 0.0 74.06591687319766 0.0 37 3.5557704821269196E-4 0.0 0.0 74.34426258653856 0.0 38 4.2669245785523035E-4 0.0 0.0 74.60234040813134 0.0 39 4.2669245785523035E-4 0.0 0.0 74.97263834614003 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTA 20 7.033824E-4 45.000004 41 GTTTCGG 20 7.033824E-4 45.000004 2 TGCCACG 20 7.033824E-4 45.000004 1 TTCACGG 40 6.8175723E-9 45.000004 2 TAACGGA 20 7.033824E-4 45.000004 3 GTTACCG 20 7.033824E-4 45.000004 38 ACGATAG 20 7.033824E-4 45.000004 1 ATAAGCG 20 7.033824E-4 45.000004 1 CCGGTAT 20 7.033824E-4 45.000004 42 AAATGCG 20 7.033824E-4 45.000004 1 CCGATAT 35 1.2121927E-7 45.0 11 GCACGCG 25 3.891252E-5 45.0 1 TCCTCGC 25 3.891252E-5 45.0 13 ACGATTG 25 3.891252E-5 45.0 1 GTATGCG 25 3.891252E-5 45.0 1 TCGTCCC 75 0.0 45.0 38 GAACACG 35 1.2121927E-7 45.0 1 GCGAGAC 30 2.1658507E-6 44.999996 21 TTGCACG 30 2.1658507E-6 44.999996 1 GCGTAAG 30 2.1658507E-6 44.999996 1 >>END_MODULE