##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935230.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 994529 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.011690961248995 33.0 31.0 34.0 30.0 34.0 2 32.13648068583219 33.0 31.0 34.0 30.0 34.0 3 32.08102730036027 33.0 31.0 34.0 30.0 34.0 4 35.80532794921013 37.0 35.0 37.0 35.0 37.0 5 33.330410676812846 37.0 35.0 37.0 30.0 37.0 6 34.350354791061896 37.0 35.0 37.0 29.0 37.0 7 35.5852267756898 37.0 35.0 37.0 32.0 37.0 8 35.529863885316566 37.0 35.0 37.0 33.0 37.0 9 37.61950933557493 39.0 37.0 39.0 35.0 39.0 10 37.21652963362556 39.0 37.0 39.0 34.0 39.0 11 37.03031887456273 39.0 37.0 39.0 33.0 39.0 12 37.208182969023525 39.0 37.0 39.0 34.0 39.0 13 37.15949358942776 39.0 37.0 39.0 34.0 39.0 14 38.17084971881162 40.0 38.0 41.0 33.0 41.0 15 38.29722109661961 40.0 38.0 41.0 33.0 41.0 16 38.35179466863209 40.0 38.0 41.0 33.0 41.0 17 38.234981584247414 40.0 38.0 41.0 33.0 41.0 18 37.97296207551514 39.0 37.0 41.0 33.0 41.0 19 37.5664430097061 39.0 37.0 41.0 33.0 41.0 20 37.0757635021201 39.0 35.0 40.0 33.0 41.0 21 37.021219089639416 38.0 35.0 40.0 33.0 41.0 22 37.027772945786396 38.0 35.0 40.0 33.0 41.0 23 36.79639608296993 38.0 35.0 40.0 33.0 41.0 24 36.54079971524209 38.0 35.0 40.0 32.0 41.0 25 36.35495495857838 38.0 35.0 40.0 31.0 41.0 26 36.541975146023894 38.0 35.0 40.0 32.0 41.0 27 36.434146213936444 38.0 35.0 40.0 32.0 41.0 28 36.42357638641005 38.0 35.0 40.0 32.0 41.0 29 36.41571738983981 38.0 35.0 40.0 32.0 41.0 30 36.07522555903347 38.0 35.0 40.0 31.0 41.0 31 35.7919256250949 38.0 35.0 40.0 30.0 41.0 32 35.30140197017885 38.0 35.0 40.0 25.0 41.0 33 34.78690113611569 38.0 35.0 40.0 22.0 41.0 34 34.326975885067206 38.0 34.0 40.0 18.0 41.0 35 33.96874600941752 38.0 34.0 40.0 15.0 41.0 36 33.684242490666435 38.0 34.0 40.0 15.0 41.0 37 33.573015970373916 38.0 33.0 40.0 12.0 41.0 38 33.44795073849028 38.0 33.0 40.0 11.0 41.0 39 33.31744574567458 37.0 33.0 40.0 10.0 41.0 40 33.19892029292258 37.0 33.0 40.0 10.0 41.0 41 33.0620635496803 37.0 33.0 40.0 10.0 41.0 42 33.05426789967915 37.0 33.0 40.0 10.0 41.0 43 32.94489954541295 37.0 33.0 40.0 10.0 41.0 44 32.88254238941248 37.0 33.0 40.0 10.0 41.0 45 32.86130620625442 37.0 33.0 40.0 10.0 41.0 46 32.74281795704298 37.0 33.0 40.0 10.0 41.0 47 32.631570321227436 36.0 32.0 40.0 10.0 41.0 48 32.57168368142106 36.0 32.0 40.0 10.0 41.0 49 32.54650895046801 36.0 32.0 40.0 10.0 41.0 50 32.43152889458226 36.0 32.0 40.0 10.0 41.0 51 31.548222324336443 35.0 30.0 39.0 9.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 12.0 9 22.0 10 33.0 11 35.0 12 31.0 13 59.0 14 60.0 15 101.0 16 180.0 17 353.0 18 630.0 19 1238.0 20 2288.0 21 3878.0 22 6227.0 23 9072.0 24 13551.0 25 20639.0 26 28266.0 27 30327.0 28 28697.0 29 25815.0 30 24857.0 31 26465.0 32 30649.0 33 39819.0 34 60300.0 35 77983.0 36 93951.0 37 105620.0 38 167424.0 39 195889.0 40 55.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.1018421785589 15.910948800889669 19.288829184468227 29.698379836083213 2 45.32165477326453 21.27901750476859 21.027642230643853 12.371685491323028 3 24.16098474755387 21.810625934487582 42.35381773683824 11.67457158112031 4 21.024122976806105 20.112032932171914 45.36730452304558 13.496539567976399 5 19.739896976357652 28.6117348010968 39.0027842325362 12.64558399000934 6 19.683387814734413 28.894481709432302 40.827969822901096 10.59416065293219 7 58.714225527862936 5.92250200848844 31.83647736767857 3.526795095970052 8 58.94931168422439 8.156926545128398 29.158827947701877 3.734933822945334 9 53.970170804471266 7.8767939396437905 30.61318473367795 7.539850522206995 10 29.056266835858985 24.490588006986222 35.712583544572354 10.74056161258244 11 23.26206676728381 19.24428548589332 42.68482869780569 14.808819049017172 12 19.94220379697324 17.895305214830337 46.14948382601211 16.013007162184312 13 20.772647152571718 17.946284120422835 47.455629750364245 13.825438976641205 14 15.60115391305834 21.761658031088082 47.13316554871703 15.504022507136545 15 14.188223772258024 21.045841800490482 48.69098839752285 16.074946029728647 16 17.343888413510314 21.568802920779582 44.32168393279633 16.76562473291377 17 17.352234072611257 22.246812310148826 44.619714457798615 15.781239159441304 18 17.09180928861803 20.626447293140775 46.206194087854655 16.075549330386547 19 16.483682225455468 22.3162924359169 44.638316228083845 16.561709110543784 20 17.39386181800631 24.136450520799293 45.11391824672785 13.355769414466549 21 16.67915163861486 24.08054465983395 45.60239067940704 13.637913022144152 22 15.483912485206567 20.98088642965665 46.70150392799003 16.833697157146748 23 15.91859060922306 22.15752381277972 45.80509970046122 16.118785877536 24 15.96464255944271 22.85081681881574 44.04657883279422 17.13796178894733 25 15.600651162510093 24.698525633742204 42.78769145997754 16.913131743770165 26 14.626018949673664 22.724425330985824 45.00723458038931 17.642321138951203 27 16.468599709007982 22.321319941399395 44.89532230834898 16.314758041243643 28 13.718353109864069 23.846665104788297 44.573360857250016 17.861620928097622 29 16.91846089958161 21.89810452988299 44.72127006854501 16.46216450199039 30 17.953523728317624 23.405350673534908 43.29979316842445 15.341332429723014 31 16.924091705722006 24.231470374418443 41.59707761161314 17.247360308246414 32 19.927422930854707 23.752047451607748 40.30832685623044 16.012202761307112 33 19.432113090719323 23.455324078030905 39.597638681224986 17.514924150024786 34 17.345095014826114 24.030671805447604 40.403045059520636 18.221188120205646 35 19.498275062868956 24.69410142891761 38.48294016564625 17.324683342567184 36 19.30139794817446 27.847755067976905 36.75579093219001 16.095056051658624 37 20.233799114957936 27.24686761270913 36.003877212228105 16.51545606010483 38 20.165726690724956 26.530045881015035 35.8080055986301 17.496221829629903 39 20.042854456732783 24.47309228790714 36.31276714907258 19.1712861062875 40 20.282063167589882 23.788245491081707 37.15909742199574 18.770593919332672 41 19.155097538633868 25.48673794328773 34.984701300816766 20.37346321726164 42 19.39048534532427 25.786075619715465 37.1039959619076 17.71944307305267 43 19.3127601105649 25.27397391126855 36.943517986906365 18.469747991260185 44 19.598121321751304 24.040123515754694 36.94603173964761 19.415723422846394 45 19.283701128876082 22.9889726694747 36.2376562171641 21.48966998448512 46 19.715262199493427 24.372139977818648 36.999323297762054 18.913274524925868 47 17.2630461253518 25.629116898551977 38.91057978198725 18.19725719410897 48 17.77776213664961 25.774713457325028 37.2430567635534 19.204467642471965 49 19.12302205365555 23.632694471453323 38.20632681399939 19.037956660891737 50 17.971321097725657 23.75747715752884 37.26316678548338 21.008034959262122 51 17.627238622503718 23.006066188115177 36.30723689304183 23.059458296339272 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4783.0 1 7459.5 2 10136.0 3 50697.5 4 91259.0 5 55570.5 6 19882.0 7 18542.5 8 17203.0 9 17093.5 10 16984.0 11 16586.0 12 16188.0 13 15800.5 14 15413.0 15 14311.0 16 13209.0 17 12836.5 18 12464.0 19 12715.5 20 12967.0 21 12221.0 22 11475.0 23 11903.5 24 12332.0 25 13435.0 26 15384.5 27 16231.0 28 17125.5 29 18020.0 30 19025.5 31 20031.0 32 21840.5 33 23650.0 34 23876.0 35 24102.0 36 25817.0 37 27532.0 38 28927.0 39 30322.0 40 31941.0 41 33560.0 42 36815.5 43 40071.0 44 42287.0 45 44503.0 46 57845.5 47 71188.0 48 69860.5 49 68533.0 50 68038.0 51 67543.0 52 59126.5 53 50710.0 54 45253.5 55 39797.0 56 37418.0 57 35039.0 58 32810.0 59 30581.0 60 27544.5 61 24508.0 62 21691.5 63 18875.0 64 16229.5 65 13584.0 66 11508.0 67 9432.0 68 7818.0 69 6204.0 70 5315.0 71 4426.0 72 3776.0 73 3126.0 74 2536.0 75 1516.0 76 1086.0 77 816.5 78 547.0 79 439.0 80 331.0 81 227.0 82 123.0 83 87.5 84 52.0 85 39.0 86 26.0 87 16.0 88 6.0 89 4.5 90 3.0 91 2.5 92 2.0 93 3.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 994529.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.59417379616879 #Duplication Level Percentage of deduplicated Percentage of total 1 75.64550011157564 26.92539077869529 2 8.583114436280043 6.110177339147144 3 3.5846419132291607 3.8277710176952917 4 2.1128713915281616 3.008236460760255 5 1.4603527163546117 2.5990024194816614 6 1.12884569384633 2.410819788949381 7 0.8785223165796978 2.1889193214105407 8 0.7566757184901461 2.154659762502332 9 0.6418818229194722 2.0562527845437595 >10 5.021622044468017 31.426131750165066 >50 0.13471987901618304 3.2849474962735936 >100 0.04246590616202101 2.7690349187496155 >500 0.0026358148651664318 0.646834381305148 >1k 0.005857366367036515 4.23335120464175 >5k 0.0 0.0 >10k+ 2.9286831835182575E-4 6.358470575679098 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60996 6.133154488204969 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCG 4616 0.4641393061439134 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCC 4432 0.44563808596833276 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGC 4252 0.4275390662313517 No Hit GAATCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTC 4008 0.40300483947677745 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3052 0.30687893465147825 No Hit GCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGC 2048 0.20592662456298408 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1873 0.18833035537425255 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1729 0.17385113958466772 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCG 1726 0.17354948925571803 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGAGTCGAT 1500 0.15082516447484187 No Hit CCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGC 1296 0.13031294210626337 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1279 0.12860359024221515 No Hit GAACTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCT 1241 0.12478268607551915 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGT 1139 0.11452657489122993 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCT 1130 0.11362162390438087 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1092 0.10980071973768488 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGC 1085 0.1090968689701356 No Hit CTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGCT 1065 0.10708586677713773 Illumina Single End Adapter 2 (95% over 21bp) GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1045 0.10507486458413984 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1002 0.10075120986919436 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0110021929978914E-4 0.0 0.0 0.11653757708422781 0.0 2 2.0110021929978914E-4 0.0 0.0 0.5628795138201098 0.0 3 2.0110021929978914E-4 0.0 0.0 0.7663929357514965 0.0 4 2.0110021929978914E-4 0.0 0.0 1.141645944964903 0.0 5 2.0110021929978914E-4 0.0 0.0 2.2552384093374855 0.0 6 2.0110021929978914E-4 0.0 0.0 2.878649089166832 0.0 7 2.0110021929978914E-4 0.0 0.0 3.6004983263434247 0.0 8 2.0110021929978914E-4 0.0 0.0 4.455576458806128 0.0 9 2.0110021929978914E-4 0.0 0.0 4.915693760564046 0.0 10 2.0110021929978914E-4 0.0 0.0 6.448177981738089 0.0 11 2.0110021929978914E-4 0.0 0.0 8.12525326058868 0.0 12 2.0110021929978914E-4 0.0 0.0 9.67935575533745 0.0 13 2.0110021929978914E-4 0.0 0.0 10.106190970801254 0.0 14 2.0110021929978914E-4 0.0 0.0 10.34781288428995 0.0 15 2.0110021929978914E-4 0.0 0.0 10.734428055893796 0.0 16 2.0110021929978914E-4 0.0 0.0 11.327070402170273 0.0 17 2.0110021929978914E-4 0.0 0.0 12.034440423557282 0.0 18 2.0110021929978914E-4 0.0 0.0 12.729241681238053 0.0 19 2.0110021929978914E-4 0.0 0.0 13.406949420278343 0.0 20 2.0110021929978914E-4 0.0 0.0 13.941976553725432 0.0 21 2.0110021929978914E-4 0.0 0.0 14.479718540133067 0.0 22 2.0110021929978914E-4 0.0 0.0 15.102224268975565 0.0 23 2.0110021929978914E-4 0.0 0.0 15.599243460974995 0.0 24 2.0110021929978914E-4 0.0 0.0 15.972988218543652 0.0 25 2.0110021929978914E-4 0.0 0.0 16.274537997383685 0.0 26 2.0110021929978914E-4 0.0 0.0 16.543006790148905 0.0 27 2.0110021929978914E-4 0.0 0.0 16.87170509859441 0.0 28 2.0110021929978914E-4 0.0 0.0 17.140676641907877 0.0 29 2.0110021929978914E-4 0.0 0.0 17.401403076230054 0.0 30 2.0110021929978914E-4 0.0 0.0 17.702852304960437 0.0 31 2.0110021929978914E-4 0.0 0.0 17.973633750247604 0.0 32 4.022004385995783E-4 0.0 0.0 18.22460682393374 0.0 33 4.022004385995783E-4 0.0 0.0 18.461000131720645 0.0 34 4.022004385995783E-4 0.0 0.0 18.71277760628398 0.0 35 4.022004385995783E-4 0.0 0.0 18.966666633149963 0.0 36 4.022004385995783E-4 0.0 0.0 19.22900186922654 0.0 37 4.022004385995783E-4 0.0 0.0 19.48460024795657 0.0 38 4.022004385995783E-4 0.0 0.0 19.797512189187042 0.0 39 4.022004385995783E-4 0.0 0.0 20.326003565506888 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGAA 40 6.8139343E-9 45.0 19 TGTTCGT 20 7.032828E-4 45.0 38 GCGTATC 20 7.032828E-4 45.0 32 TGCGACG 30 2.1652068E-6 44.999996 1 CGTTATT 1375 0.0 44.672726 1 CGTTTTT 18970 0.0 43.778336 1 CACGACG 60 3.6379788E-12 41.249996 26 CGGTCTA 60 3.6379788E-12 41.249996 31 CCGATGA 760 0.0 40.263157 18 CGATGAA 760 0.0 40.263157 19 CGGGTAT 85 0.0 39.705883 6 TACGGCT 455 0.0 39.065933 7 CCACCGA 1045 0.0 38.97129 15 ACCACCG 1135 0.0 38.854626 14 CGACCAC 1580 0.0 38.734177 12 GTTACCG 35 6.247441E-6 38.571426 38 TACCGGT 35 6.247441E-6 38.571426 40 GCGACCA 1610 0.0 38.01242 11 CCGTAGG 30 1.13981136E-4 37.499996 1 ACTACCG 30 1.13981136E-4 37.499996 14 >>END_MODULE