##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935228.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 513894 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.640455035474243 31.0 31.0 34.0 30.0 34.0 2 31.75912542275255 31.0 31.0 34.0 30.0 34.0 3 31.777697346145313 31.0 31.0 34.0 30.0 34.0 4 35.58460110450793 37.0 35.0 37.0 33.0 37.0 5 32.92343557231647 37.0 35.0 37.0 28.0 37.0 6 33.986368784223984 37.0 35.0 37.0 26.0 37.0 7 35.332385667083095 37.0 35.0 37.0 32.0 37.0 8 35.20217204326184 37.0 35.0 37.0 32.0 37.0 9 37.28060261454697 39.0 37.0 39.0 34.0 39.0 10 36.63627323922832 39.0 35.0 39.0 32.0 39.0 11 36.5143298034225 39.0 35.0 39.0 32.0 39.0 12 36.9285008192351 39.0 37.0 39.0 33.0 39.0 13 36.92759790929647 39.0 37.0 39.0 33.0 39.0 14 37.95047422231044 40.0 37.0 41.0 33.0 41.0 15 38.038716155471754 40.0 37.0 41.0 33.0 41.0 16 38.08521407138437 40.0 37.0 41.0 33.0 41.0 17 37.95953834837535 40.0 37.0 41.0 33.0 41.0 18 37.88570210977361 39.0 37.0 40.0 33.0 41.0 19 37.63808295095876 39.0 37.0 40.0 33.0 41.0 20 37.260182060891935 39.0 35.0 40.0 32.0 41.0 21 37.306399763375325 39.0 35.0 40.0 33.0 41.0 22 37.32085605202629 39.0 35.0 40.0 33.0 41.0 23 36.973977123686986 39.0 35.0 40.0 32.0 41.0 24 36.754682872343324 39.0 35.0 40.0 31.0 41.0 25 36.606496670519604 38.0 35.0 40.0 31.0 41.0 26 36.85307865046099 39.0 35.0 40.0 32.0 41.0 27 36.70032925077934 39.0 35.0 40.0 32.0 41.0 28 36.82221625471401 39.0 35.0 40.0 32.0 41.0 29 36.87425422363367 39.0 35.0 40.0 32.0 41.0 30 36.594780246509984 39.0 35.0 40.0 31.0 41.0 31 36.414118475794616 39.0 35.0 40.0 31.0 41.0 32 35.939740491229706 39.0 35.0 40.0 29.0 41.0 33 35.70126134961685 39.0 35.0 40.0 26.0 41.0 34 35.321648044149185 39.0 35.0 40.0 23.0 41.0 35 35.049802099265605 39.0 35.0 40.0 21.0 41.0 36 34.912100549918854 39.0 35.0 40.0 20.0 41.0 37 34.74319995952472 38.0 35.0 40.0 19.0 41.0 38 34.749092225244894 38.0 35.0 40.0 20.0 41.0 39 34.63532362705149 38.0 35.0 40.0 18.0 41.0 40 34.5590121698249 38.0 34.0 40.0 18.0 41.0 41 34.38535962669344 38.0 34.0 40.0 18.0 41.0 42 34.43001864197675 38.0 34.0 40.0 18.0 41.0 43 34.33356100674458 38.0 34.0 40.0 16.0 41.0 44 34.29839032952321 38.0 34.0 40.0 15.0 41.0 45 34.38757603708158 38.0 34.0 40.0 18.0 41.0 46 34.26908662097631 38.0 34.0 40.0 17.0 41.0 47 34.12015318334131 38.0 34.0 40.0 15.0 41.0 48 34.099043771672754 38.0 34.0 40.0 15.0 41.0 49 34.118150824878285 38.0 34.0 40.0 15.0 41.0 50 33.96544423558166 38.0 34.0 40.0 15.0 41.0 51 33.02793766807941 37.0 32.0 40.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 5.0 10 5.0 11 9.0 12 11.0 13 26.0 14 31.0 15 36.0 16 67.0 17 140.0 18 287.0 19 536.0 20 1139.0 21 2008.0 22 3342.0 23 4684.0 24 6355.0 25 8678.0 26 10764.0 27 11059.0 28 10061.0 29 9478.0 30 9867.0 31 11529.0 32 14837.0 33 19594.0 34 27902.0 35 39961.0 36 51871.0 37 72030.0 38 107968.0 39 89582.0 40 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.62237348558263 21.272285724293337 21.429127407597676 17.676213382526356 2 36.838336310601015 28.3589611865482 21.950051956240003 12.85265054661078 3 25.12055015236605 28.228194919574857 34.574639906284176 12.076615021774918 4 21.96347884972387 24.029663704966396 40.35384729146478 13.653010153844955 5 22.582672691255397 31.136382211117468 31.88128291048348 14.399662187143653 6 19.505189786220505 36.50324775148182 33.244988266062656 10.746574196235022 7 62.842531728333086 7.262392633500293 25.380136759720877 4.51493887844575 8 61.024063328235 11.211066873713255 21.307506995606097 6.45736280244564 9 56.69807392185937 8.143119008978505 23.28184411571258 11.876962953449544 10 31.289332041238076 20.86617084457106 33.177659205984114 14.66683790820675 11 22.673352870436318 23.859395128178186 33.970429699510014 19.496822301875483 12 17.765920598411345 20.58790334193433 40.612071750205295 21.03410430944903 13 20.59451949234667 23.0187548404924 42.70394283646044 13.682782830700493 14 17.665316193611915 28.06181819597037 37.07379342821671 17.199072182200997 15 14.979353718860311 24.569463741549814 42.34472478760211 18.106457751987765 16 14.79332313667799 25.37819083312901 36.626035719428515 23.202450310764476 17 15.123936064635899 27.19296197270254 37.19405169159399 20.489050271067573 18 14.84002537488276 25.409909436576417 40.006888580135204 19.743176608405623 19 14.557866019062295 27.7249783029185 37.599971978657074 20.117183699362126 20 16.216768438627422 28.006943066079774 39.65778934955458 16.118499145738227 21 15.067115008153431 30.16964588027881 38.557173269195594 16.206065842372162 22 12.880477296874455 25.78741919539827 37.605031387795925 23.727072119931346 23 14.380981291861747 27.53797475744025 36.76400191479176 21.317042035906237 24 16.138153004316067 25.78352734221454 36.277909452143824 21.800410201325565 25 12.902271674703345 31.144555102803302 34.20802733637676 21.745145886116592 26 13.42436377930079 26.574157316489394 40.056509708227765 19.94496919598205 27 18.280618181959703 26.292970923964866 36.26545552195589 19.160955372119542 28 12.127209113163415 26.539325230495002 38.19250662588004 23.140959030461534 29 15.492105375816804 23.88585972982755 38.564762382903865 22.057272511451778 30 18.346001315446376 28.507240792848332 33.471299528696576 19.675458363008712 31 14.97312675376634 30.053084877426084 30.139678610764086 24.83410975804349 32 16.703055493934546 32.518573869319354 30.074295477277413 20.704075159468687 33 18.577177394559968 26.598286806228522 28.18460616391707 26.63992963529444 34 15.130357622389054 29.004814222388276 31.46329787855083 24.401530276671842 35 18.054890697303335 29.45451785776833 30.022339237274615 22.46825220765372 36 21.095400997092785 27.44943509751038 29.120791447263443 22.334372458133387 37 18.31545026795409 30.823282622486346 30.000934044764094 20.860333064795462 38 16.538624696921932 31.025075210062774 25.55059992916827 26.88570016384702 39 19.11503150455152 30.511545182469536 27.93397081888483 22.439452494094112 40 17.398140472548814 29.26284408846961 30.459783535125922 22.87923190385566 41 19.705036447205064 30.867260563462505 26.827127773431876 22.600575215900555 42 21.32677166886556 27.07834689644168 31.33622887210203 20.25865256259073 43 23.408134751524635 24.32155269374618 30.152716318929585 22.1175962357996 44 19.433774280299048 24.838390796545593 29.335816335664553 26.392018587490806 45 18.966557305592204 24.246634519959372 28.814113416385478 27.97269475806295 46 22.60368869844754 27.66951939505034 29.022522154374247 20.70426975212787 47 16.246735708142147 27.936500523454256 34.673492977150936 21.14327079125267 48 18.67739261404103 27.170583816896094 30.292044662907138 23.859978906155742 49 20.43826158701989 23.193109863123524 34.169108804539455 22.19951974531713 50 20.116016143407006 22.114093567934244 31.433136016376917 26.33675427228183 51 18.33724464578298 22.268794731987533 28.694049745667392 30.699910876562093 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3515.0 1 4163.0 2 4811.0 3 10907.5 4 17004.0 5 11690.0 6 6376.0 7 6273.5 8 6171.0 9 6436.5 10 6702.0 11 7106.0 12 7510.0 13 7376.0 14 7242.0 15 6845.0 16 6448.0 17 5889.0 18 5330.0 19 5258.5 20 5187.0 21 4676.5 22 4166.0 23 4177.0 24 4188.0 25 4390.0 26 4586.5 27 4581.0 28 4979.5 29 5378.0 30 5825.5 31 6273.0 32 7033.0 33 7793.0 34 8717.5 35 9642.0 36 10432.5 37 11223.0 38 12314.5 39 13406.0 40 15420.0 41 17434.0 42 21031.5 43 24629.0 44 29589.5 45 34550.0 46 51480.0 47 68410.0 48 67665.5 49 66921.0 50 64250.0 51 61579.0 52 49333.0 53 37087.0 54 28928.0 55 20769.0 56 16624.0 57 12479.0 58 10256.0 59 8033.0 60 6818.5 61 5604.0 62 4621.5 63 3639.0 64 2950.0 65 2261.0 66 1797.0 67 1333.0 68 990.0 69 647.0 70 541.5 71 436.0 72 327.0 73 218.0 74 189.0 75 108.0 76 56.0 77 54.0 78 52.0 79 47.5 80 43.0 81 25.5 82 8.0 83 6.0 84 4.0 85 3.0 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 513894.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.431835022850784 #Duplication Level Percentage of deduplicated Percentage of total 1 76.13292472198832 34.58858475776491 2 10.38444205908277 9.435685168652027 3 4.222415755083269 5.754962879484869 4 2.2819426217649106 4.1469136289454 5 1.5088437496249447 3.427477015411003 6 1.0492318635565536 2.860111735549178 7 0.7803854806607109 2.481804108812387 8 0.6386994576798306 2.3213830712395462 9 0.4676929104850437 1.9123332435462086 >10 2.41528786372053 17.32169064389485 >50 0.06210695896717907 1.9252219782254605 >100 0.046905955020777663 3.883987846395846 >500 0.0030402007883837375 1.1083295942494142 >1k 0.005211772780086407 5.833479815629283 >5k 8.686287966810678E-4 2.998034512199679 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9537 1.8558301906618873 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGC 5657 1.100810673018171 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTC 4946 0.9624552923365519 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCG 4869 0.9474716575791895 No Hit GCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 3546 0.690025569475417 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCC 3276 0.6374855514950554 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2785 0.5419405558344718 No Hit CCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 1947 0.3788719074361639 No Hit CTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGCT 1860 0.3619423460869362 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCACAAGT 1841 0.35824508556239226 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCT 1234 0.24012734143617165 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCG 1140 0.22183563147263832 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1111 0.2161924443562291 No Hit GAACTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCT 1009 0.19634399311920359 No Hit TCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 982 0.1910899913211674 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTC 955 0.1858359895231312 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCACAAGTCGTA 938 0.1825279143169603 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGC 760 0.1478904209817589 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 710 0.13816078802243265 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 656 0.1276527844263603 No Hit ACTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 616 0.1198690780588993 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.39599606144457805 0.0 2 0.0 0.0 0.0 1.9245213993547308 0.0 3 0.0 0.0 0.0 2.564147470100838 0.0 4 0.0 0.0 0.0 3.6135856810937663 0.0 5 0.0 0.0 0.0 6.800040475273111 0.0 6 0.0 0.0 0.0 8.215507478195892 0.0 7 0.0 0.0 0.0 9.783924311239282 0.0 8 0.0 0.0 0.0 12.086344654734244 0.0 9 0.0 0.0 0.0 12.797580824060994 0.0 10 0.0 0.0 0.0 16.081137355174413 0.0 11 0.0 0.0 0.0 19.819262338147556 0.0 12 0.0 0.0 0.0 23.484609666584937 0.0 13 0.0 0.0 0.0 24.49240504851195 0.0 14 0.0 0.0 0.0 24.91681163819776 0.0 15 0.0 0.0 0.0 25.833732248284665 0.0 16 0.0 0.0 0.0 27.57981217916535 0.0 17 0.0 0.0 0.0 29.748547365799173 0.0 18 0.0 0.0 0.0 31.87252624082009 0.0 19 0.0 0.0 0.0 33.69702701335295 0.0 20 0.0 0.0 0.0 34.98990064098822 0.0 21 0.0 0.0 0.0 36.49001545065714 0.0 22 0.0 0.0 0.0 38.13840986662619 0.0 23 0.0 0.0 0.0 39.60953037007632 0.0 24 0.0 0.0 0.0 40.691076369835024 0.0 25 0.0 0.0 0.0 41.49785753482236 0.0 26 0.0 0.0 0.0 42.20714777755724 0.0 27 0.0 0.0 0.0 42.82030924665398 0.0 28 1.9459265918652486E-4 0.0 0.0 43.423741082791395 0.0 29 1.9459265918652486E-4 0.0 0.0 44.01724869331029 0.0 30 1.9459265918652486E-4 0.0 0.0 44.596356447049395 0.0 31 1.9459265918652486E-4 0.0 0.0 45.111248623256934 0.0 32 1.9459265918652486E-4 0.0 0.0 45.58761145294555 0.0 33 1.9459265918652486E-4 0.0 0.0 46.02719627004791 0.0 34 1.9459265918652486E-4 0.0 0.0 46.42747336999459 0.0 35 1.9459265918652486E-4 0.0 0.0 46.83242069376175 0.0 36 1.9459265918652486E-4 0.0 0.0 47.225108680000154 0.0 37 1.9459265918652486E-4 0.0 0.0 47.6100129598711 0.0 38 1.9459265918652486E-4 0.0 0.0 48.004257687383 0.0 39 1.9459265918652486E-4 0.0 0.0 48.34712995286966 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAG 30 2.1631495E-6 45.000004 6 CGGCGAG 80 0.0 45.000004 31 CGCGGGA 20 7.02964E-4 45.000004 4 ATGGACG 20 7.02964E-4 45.000004 1 TTGTACG 20 7.02964E-4 45.000004 1 CCGTCGA 20 7.02964E-4 45.000004 41 TGACCGG 40 6.8030204E-9 45.000004 2 TACTGGC 20 7.02964E-4 45.000004 24 CGGGCCG 20 7.02964E-4 45.000004 6 GTGTAAT 20 7.02964E-4 45.000004 9 GCGATTC 20 7.02964E-4 45.000004 9 ACGTCAG 20 7.02964E-4 45.000004 1 CGTCGAA 20 7.02964E-4 45.000004 42 CAGTCGA 20 7.02964E-4 45.000004 41 AGCTCGG 20 7.02964E-4 45.000004 2 TCGACTG 20 7.02964E-4 45.000004 1 CGTCAGG 20 7.02964E-4 45.000004 2 CGGCGAT 25 3.887785E-5 45.0 31 TCGCAGG 25 3.887785E-5 45.0 2 ACTGCGG 35 1.2101737E-7 45.0 2 >>END_MODULE