##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935223.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 252790 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.68436647019265 31.0 31.0 34.0 30.0 34.0 2 31.78454052771075 31.0 31.0 34.0 30.0 34.0 3 31.802836346374463 33.0 31.0 34.0 30.0 34.0 4 35.634166699632104 37.0 35.0 37.0 33.0 37.0 5 33.004675817872545 37.0 35.0 37.0 28.0 37.0 6 34.033660350488546 37.0 35.0 37.0 27.0 37.0 7 35.296206337276 37.0 35.0 37.0 32.0 37.0 8 35.090031251236205 37.0 35.0 37.0 32.0 37.0 9 37.17764547648245 39.0 37.0 39.0 34.0 39.0 10 36.899303769927606 39.0 37.0 39.0 33.0 39.0 11 36.7302504054749 39.0 37.0 39.0 32.0 39.0 12 37.047141896435775 39.0 37.0 39.0 33.0 39.0 13 36.9198860714427 39.0 37.0 39.0 33.0 39.0 14 37.94531824834843 40.0 37.0 41.0 33.0 41.0 15 38.03053127101547 40.0 37.0 41.0 33.0 41.0 16 38.0977688990862 40.0 37.0 41.0 33.0 41.0 17 37.90218363068159 40.0 37.0 41.0 33.0 41.0 18 37.8313659559318 39.0 37.0 40.0 33.0 41.0 19 37.57723406780332 39.0 36.0 40.0 33.0 41.0 20 37.15322599786384 39.0 35.0 40.0 32.0 41.0 21 37.217279164523916 39.0 35.0 40.0 33.0 41.0 22 37.20839036354286 39.0 35.0 40.0 33.0 41.0 23 36.820918548993234 39.0 35.0 40.0 32.0 41.0 24 36.59683136200008 38.0 35.0 40.0 31.0 41.0 25 36.37920408243997 38.0 35.0 40.0 31.0 41.0 26 36.67323865659243 38.0 35.0 40.0 32.0 41.0 27 36.45871276553661 38.0 35.0 40.0 31.0 41.0 28 36.59968748763796 38.0 35.0 40.0 31.0 41.0 29 36.66003797618577 39.0 35.0 40.0 32.0 41.0 30 36.241821274575734 38.0 35.0 40.0 31.0 41.0 31 36.14869259068792 38.0 35.0 40.0 30.0 41.0 32 35.777950077139124 38.0 35.0 40.0 29.0 41.0 33 35.502721626646625 38.0 35.0 40.0 27.0 41.0 34 35.20421298310851 38.0 35.0 40.0 25.0 41.0 35 35.02184026266862 38.0 35.0 40.0 24.0 41.0 36 34.78927568337355 38.0 35.0 40.0 22.0 41.0 37 34.575548874559914 38.0 35.0 40.0 21.0 41.0 38 34.5792950670517 38.0 35.0 40.0 21.0 41.0 39 34.383618814035366 38.0 34.0 40.0 20.0 41.0 40 34.253111278136004 38.0 34.0 40.0 20.0 41.0 41 34.14435302029352 38.0 34.0 40.0 18.0 41.0 42 34.21042367182246 38.0 34.0 40.0 18.0 41.0 43 34.059535582894895 38.0 34.0 40.0 18.0 41.0 44 33.97822303097433 38.0 34.0 40.0 18.0 41.0 45 34.09157798963567 38.0 34.0 40.0 18.0 41.0 46 34.019257090865935 38.0 34.0 40.0 18.0 41.0 47 33.901519047430675 38.0 33.0 40.0 18.0 41.0 48 33.897677914474464 38.0 33.0 40.0 18.0 41.0 49 33.88952094623996 37.0 33.0 40.0 18.0 41.0 50 33.760528501918586 37.0 33.0 40.0 17.0 41.0 51 32.85329324735947 36.0 32.0 40.0 14.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 1.0 10 4.0 11 8.0 12 5.0 13 10.0 14 8.0 15 23.0 16 46.0 17 86.0 18 147.0 19 302.0 20 674.0 21 1162.0 22 1614.0 23 2151.0 24 2923.0 25 3620.0 26 4595.0 27 5097.0 28 5154.0 29 5117.0 30 5335.0 31 6119.0 32 7821.0 33 10574.0 34 15311.0 35 24008.0 36 28519.0 37 34361.0 38 48737.0 39 39240.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.303453459393175 20.96760156651766 19.8366232841489 17.892321689940268 2 34.408402231100915 30.632540844178962 20.859606788243205 14.099450136476918 3 22.772657146247873 31.63297598797421 33.801178844099844 11.793188021678072 4 20.64875984018355 23.749752759207247 41.63376715851101 13.967720242098183 5 22.68562838719886 30.108390363542863 31.674908026425097 15.53107322283318 6 17.79540329918114 35.91399976264884 34.334427785909256 11.95616915226077 7 54.523913129475055 9.700541951817716 30.331896040191463 5.443648878515764 8 51.34182523042842 15.765655286997113 24.71379405830927 8.1787254242652 9 46.479686696467425 11.522212112820919 26.162822896475333 15.835278294236321 10 28.403417856719017 24.22010364334032 33.19435104236718 14.182127457573479 11 20.98302939198544 24.364492266308 35.88947347600776 18.7630048656988 12 17.325448000316467 21.720400332291625 40.97551327188575 19.978638395506152 13 18.38324300803038 24.579690652320107 44.11290003560268 12.924166304046839 14 13.930930812136555 29.822382214486332 37.7922386170339 18.45444835634321 15 10.439495233197515 26.347561216820285 45.257723802365604 17.9552197476166 16 10.954547252660312 28.302939198544248 36.516871711697455 24.225641837097985 17 11.457336128802563 29.843348233711776 38.477392301910676 20.221923335574985 18 11.131769452905575 27.221409074726054 41.44586415601883 20.200957316349538 19 11.950235373234701 27.659321966849955 38.541477115392226 21.84896554452312 20 13.75687329403853 29.42798370188694 41.420942284109344 15.39420071996519 21 13.736698445349896 32.29795482416235 38.47778788717908 15.487558843308674 22 11.225523161517465 27.078207207563594 39.229795482416236 22.46647414850271 23 12.583567387950472 29.259859962814982 38.11780529293089 20.03876735630365 24 15.640254756912853 26.334506902962936 36.127615807587325 21.89762253253689 25 11.028126112583568 34.019146326990786 34.249772538470665 20.702955021954985 26 11.75165156849559 27.80529293089125 40.25515249812097 20.187903002492188 27 15.42268285929032 30.618299774516395 35.22686815143004 18.73214921476324 28 10.110368289884883 28.435855848728192 38.59567229716365 22.858103564223267 29 15.746271608845285 24.808338937457968 39.11942719253135 20.325962261165394 30 13.981565726492345 35.90806598362277 33.181692313778235 16.92867597610665 31 14.748605561928873 31.60132916650184 30.128565212231496 23.52150005933779 32 21.308596067882434 31.595395387475772 29.49641995332094 17.59958859132086 33 17.940978677954035 31.607262945527907 27.808062027770085 22.643696348747973 34 16.637129633292457 29.40978677954033 32.440365520788006 21.512718066379207 35 19.62696309189446 30.2836346374461 30.130147553305115 19.959254717354323 36 18.848451283674194 31.592230705328532 30.353653229953714 19.205664781043556 37 18.982950274931763 31.596582143280983 31.26903754104197 18.151430040745282 38 19.792713319355986 30.27730527315163 26.77954032991811 23.15044107757427 39 21.853316982475572 30.995292535305985 29.76067091261522 17.390719569603228 40 20.411804264409195 31.006764508089717 31.497685826179833 17.083745401321256 41 20.414573361288028 31.358835396969813 27.04576921555441 21.180822026187744 42 22.63855374025871 25.450373828078643 32.5175046481269 19.393567783535744 43 24.319395545709877 25.624431346176667 29.480596542584752 20.5755765655287 44 19.00510304996242 27.075438110684757 30.630167332568536 23.289291506784288 45 18.62731911863602 24.92028956841647 29.984176589263818 26.46821472368369 46 24.261640096522804 28.14945211440326 30.287986075398553 17.300921713675383 47 16.302068910953757 27.72182443925788 37.754658016535465 18.221448633252898 48 19.387238419241267 27.01451797935045 31.21721587088097 22.381027730527315 49 20.42208948138771 23.025831718026822 36.98010206099925 19.571976739586216 50 20.992523438427153 22.887772459353613 32.94354998219866 23.17615412002057 51 18.57193718105938 22.31180030855651 30.145575378772893 28.970687131611218 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4051.0 1 4350.5 2 4650.0 3 8294.5 4 11939.0 5 7720.5 6 3502.0 7 3584.0 8 3666.0 9 3911.5 10 4157.0 11 4213.5 12 4270.0 13 4030.0 14 3790.0 15 3790.5 16 3791.0 17 3650.0 18 3509.0 19 3223.5 20 2938.0 21 2938.0 22 2938.0 23 2780.0 24 2622.0 25 2891.0 26 3067.5 27 2975.0 28 3170.0 29 3365.0 30 3654.5 31 3944.0 32 4134.0 33 4324.0 34 4490.0 35 4656.0 36 5042.5 37 5429.0 38 5685.0 39 5941.0 40 6493.5 41 7046.0 42 8860.0 43 10674.0 44 12334.5 45 13995.0 46 23916.0 47 33837.0 48 31407.5 49 28978.0 50 27632.0 51 26286.0 52 20268.0 53 14250.0 54 11087.0 55 7924.0 56 6584.0 57 5244.0 58 4644.0 59 4044.0 60 3612.5 61 3181.0 62 2838.5 63 2496.0 64 2230.5 65 1965.0 66 1511.5 67 1058.0 68 941.0 69 824.0 70 721.5 71 619.0 72 498.0 73 377.0 74 280.5 75 147.5 76 111.0 77 70.0 78 29.0 79 29.5 80 30.0 81 20.5 82 11.0 83 6.0 84 1.0 85 4.0 86 7.0 87 4.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 252790.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.59721710758168 #Duplication Level Percentage of deduplicated Percentage of total 1 75.132 29.75018115726827 2 10.208 8.084167844683876 3 4.133 4.909658949169052 4 2.3539999999999996 3.728473962849891 5 1.4829999999999999 2.9361336485271816 6 1.121 2.6633088226559436 7 0.849 2.3532626127035794 8 0.745 2.359994139611868 9 0.601 2.1418134733490928 >10 3.211 19.976004086432805 >50 0.086 2.414638299220331 >100 0.058 4.383411933809292 >500 0.008 2.0519277905148825 >1k 0.01 9.323560740151182 >5k 0.001 2.9234625390527555 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7383 2.920606036631196 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCG 4044 1.599746825428221 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGC 3703 1.4648522489022509 No Hit GAATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTC 3503 1.38573519522133 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3325 1.3153210174453103 No Hit GCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 2647 1.0471142054669884 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCC 1420 0.5617310811345385 No Hit CCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 1401 0.5542149610348511 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACGAAGGT 1286 0.5087226551683215 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1203 0.47588907789073936 No Hit CTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGCT 1014 0.4011234621622691 Illumina Single End Adapter 1 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCT 958 0.3789706871316112 No Hit GAACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCT 695 0.2749317615412002 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTC 638 0.2523834012421377 No Hit TCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 637 0.25198781597373315 Illumina Single End Adapter 1 (95% over 21bp) TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 597 0.23616440523754895 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTA 577 0.22825269986945684 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 569 0.22508801772222004 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 511 0.20214407215475294 No Hit ACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 468 0.18513390561335497 Illumina Single End Adapter 1 (95% over 21bp) GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 434 0.1716840064875984 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCG 418 0.1653546421931247 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 417 0.16495905692472013 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGC 334 0.13212547964713794 No Hit TTCTCTGGGATATTTTTATTACTTGCCATATTTTTAATTACAATAAGGTAT 327 0.12935638276830572 No Hit TGATTTTTTTCTTTATATCTTTTTACATTCATGAACTTTTAATATAGAATC 323 0.12777404169468728 No Hit ACTTTTTTTCTTTTAATTTTTGTTTTATTTTTTGTAACCACTGTCTTAATG 308 0.12184026266861822 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCG 285 0.11274180149531232 No Hit ACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG 267 0.10562126666402943 No Hit GCCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG 260 0.1028521697851972 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.43277028363463743 0.0 2 0.0 0.0 0.0 2.60136872502868 0.0 3 0.0 0.0 0.0 3.320542742988251 0.0 4 0.0 0.0 0.0 4.5144190830333475 0.0 5 0.0 0.0 0.0 8.282764349855611 0.0 6 0.0 0.0 0.0 9.642390917362237 0.0 7 0.0 0.0 0.0 11.348945765259701 0.0 8 0.0 0.0 0.0 13.409153843110882 0.0 9 0.0 0.0 0.0 14.085209066814352 0.0 10 0.0 0.0 0.0 17.77997547371336 0.0 11 0.0 0.0 0.0 21.001226314332055 0.0 12 0.0 0.0 0.0 24.8625341192294 0.0 13 0.0 0.0 0.0 25.816290201352903 0.0 14 0.0 0.0 0.0 26.241148779619447 0.0 15 0.0 0.0 0.0 27.261363186834924 0.0 16 0.0 0.0 0.0 28.805332489418095 0.0 17 0.0 0.0 0.0 30.547094426203568 0.0 18 3.955852684046046E-4 0.0 0.0 32.23466118121761 0.0 19 3.955852684046046E-4 0.0 0.0 34.0373432493374 0.0 20 3.955852684046046E-4 0.0 0.0 35.19324340361565 0.0 21 7.911705368092092E-4 0.0 0.0 36.42549151469599 0.0 22 7.911705368092092E-4 0.0 0.0 37.72222002452629 0.0 23 7.911705368092092E-4 0.0 0.0 38.73966533486293 0.0 24 7.911705368092092E-4 0.0 0.0 39.51975948415681 0.0 25 7.911705368092092E-4 0.0 0.0 40.12619170062107 0.0 26 7.911705368092092E-4 0.0 0.0 40.61750860397959 0.0 27 7.911705368092092E-4 0.0 0.0 41.11436370109577 0.0 28 7.911705368092092E-4 0.0 0.0 41.59539538747577 0.0 29 7.911705368092092E-4 0.0 0.0 42.07998734127141 0.0 30 7.911705368092092E-4 0.0 0.0 42.56695280667748 0.0 31 7.911705368092092E-4 0.0 0.0 42.9463190790775 0.0 32 7.911705368092092E-4 0.0 0.0 43.287313580442266 0.0 33 7.911705368092092E-4 0.0 0.0 43.659559318011 0.0 34 7.911705368092092E-4 0.0 0.0 43.978401044345105 0.0 35 7.911705368092092E-4 0.0 0.0 44.34985561137703 0.0 36 7.911705368092092E-4 0.0 0.0 44.62597412872345 0.0 37 7.911705368092092E-4 0.0 0.0 44.9226630800269 0.0 38 7.911705368092092E-4 0.0 0.0 45.24308714743463 0.0 39 7.911705368092092E-4 0.0 0.0 45.552039242058626 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATGATC 85 0.0 45.000004 2 TAGGGTA 35 1.2068995E-7 45.000004 5 CAATAAG 35 1.2068995E-7 45.000004 41 AGCACCC 20 7.0228364E-4 45.0 38 TGATAAG 20 7.0228364E-4 45.0 26 CGGCGAA 50 2.1827873E-11 45.0 31 CGAACAC 20 7.0228364E-4 45.0 34 ACGCCGG 20 7.0228364E-4 45.0 37 CCGATTA 25 3.882144E-5 45.0 18 GCGAAGG 25 3.882144E-5 45.0 2 GGGTCAT 20 7.0228364E-4 45.0 7 AGCTTAG 20 7.0228364E-4 45.0 1 TCTTACG 25 3.882144E-5 45.0 24 ACCGATT 25 3.882144E-5 45.0 17 GCCGGTC 25 3.882144E-5 45.0 39 AGGACGG 20 7.0228364E-4 45.0 2 AGGACGA 20 7.0228364E-4 45.0 44 CCTACCC 20 7.0228364E-4 45.0 14 GGATATC 20 7.0228364E-4 45.0 8 AGGCGAC 20 7.0228364E-4 45.0 31 >>END_MODULE