SRR2935222.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935222.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2329697
Sequences flagged as poor quality	0
Sequence length	51
%GC	29

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	206690	8.87196918740935	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCC	7749	0.3326183619586582	No Hit
GAATCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTC	6572	0.28209677052423554	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCG	6364	0.2731685708484837	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGC	6257	0.26857569889989985	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4936	0.21187304615149521	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCG	4177	0.1792937021423816	No Hit
CGTTTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGT	3968	0.17032257842972712	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC	3528	0.15143600219255982	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	3517	0.1509638377866306	No Hit
GCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGC	3252	0.13958896800742757	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCT	3125	0.13413761532079066	No Hit
CGTTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTC	3025	0.12984521163052534	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTT	2928	0.125681580050968	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	2756	0.1182986457037117	No Hit
CGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTG	2741	0.1176547851501719	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	2657	0.11404916605034904	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAATCG	20	7.034779E-4	45.000004	2
TACTACG	25	3.892045E-5	44.999996	1
CGTTATT	7605	0.0	44.64497	1
CGTTTTT	101975	0.0	44.582985	1
GTTATTT	8000	0.0	42.946877	2
CCGATGA	1165	0.0	40.55794	18
CGTAAGG	140	0.0	40.17857	2
TACGGCT	690	0.0	39.782608	7
ACGGCTG	690	0.0	39.782608	8
CACGCGA	40	3.4602635E-7	39.375004	41
TACGCTT	40	3.4602635E-7	39.375004	15
GTTTTTT	116565	0.0	39.16677	2
CCGTCGA	100	0.0	38.249996	41
CGTCGAA	100	0.0	38.249996	42
CGATGAA	1270	0.0	38.09055	19
CGACCAC	2095	0.0	37.696896	12
TGCGTAG	90	0.0	37.5	1
CGCGACC	30	1.14028204E-4	37.499996	10
CGCTATC	30	1.14028204E-4	37.499996	1
TCGCTTC	30	1.14028204E-4	37.499996	14