##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935222.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2329697 Sequences flagged as poor quality 0 Sequence length 51 %GC 29 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06983697880025 33.0 31.0 34.0 30.0 34.0 2 32.27005271500972 34.0 31.0 34.0 30.0 34.0 3 32.09330097433271 33.0 31.0 34.0 30.0 34.0 4 35.831762242042636 37.0 35.0 37.0 35.0 37.0 5 33.27381586532498 37.0 35.0 37.0 30.0 37.0 6 34.358619168072075 37.0 35.0 37.0 28.0 37.0 7 35.66813838881193 37.0 35.0 37.0 32.0 37.0 8 35.63594965353864 37.0 35.0 37.0 33.0 37.0 9 37.81483729429192 39.0 38.0 39.0 35.0 39.0 10 37.48222408321769 39.0 37.0 39.0 35.0 39.0 11 37.3058642389976 39.0 37.0 39.0 34.0 39.0 12 37.56383770078255 39.0 37.0 39.0 35.0 39.0 13 37.57582380884725 39.0 37.0 39.0 35.0 39.0 14 38.811840338035374 40.0 38.0 41.0 35.0 41.0 15 38.896474949317444 40.0 38.0 41.0 35.0 41.0 16 38.865374338379624 40.0 38.0 41.0 35.0 41.0 17 38.73627557575084 40.0 38.0 41.0 34.0 41.0 18 38.07858747296322 39.0 38.0 40.0 35.0 41.0 19 37.24505547287909 37.0 37.0 40.0 34.0 41.0 20 36.321559842331425 35.0 35.0 40.0 33.0 41.0 21 36.18916837683184 35.0 35.0 40.0 33.0 41.0 22 36.11744316964824 35.0 35.0 40.0 33.0 41.0 23 35.907051432010256 35.0 35.0 40.0 33.0 41.0 24 35.523572378725646 35.0 35.0 39.0 32.0 41.0 25 35.34484269842817 35.0 35.0 39.0 31.0 41.0 26 35.5417537130365 35.0 35.0 39.0 32.0 41.0 27 35.438056536965966 35.0 35.0 39.0 32.0 41.0 28 35.34987682947611 35.0 35.0 40.0 31.0 41.0 29 35.199932866806286 35.0 35.0 40.0 31.0 41.0 30 34.6109026195252 35.0 35.0 40.0 27.0 41.0 31 33.888406088860485 35.0 33.0 40.0 21.0 41.0 32 32.58469062715022 35.0 33.0 40.0 15.0 41.0 33 31.012914554982903 35.0 26.0 40.0 10.0 41.0 34 29.61089832712151 35.0 21.0 40.0 7.0 41.0 35 28.65312699462634 35.0 17.0 40.0 7.0 41.0 36 28.101952743210813 35.0 15.0 40.0 7.0 41.0 37 27.878659327800996 35.0 15.0 40.0 7.0 41.0 38 27.708488700461906 35.0 12.0 40.0 7.0 41.0 39 27.48920911174286 35.0 12.0 39.0 7.0 41.0 40 27.32995793015143 35.0 11.0 39.0 7.0 41.0 41 27.119858505204753 34.0 10.0 39.0 7.0 41.0 42 27.042625714846178 34.0 10.0 39.0 7.0 41.0 43 26.889476185100467 34.0 10.0 39.0 7.0 41.0 44 26.738769891535252 34.0 10.0 39.0 7.0 41.0 45 26.729795763140014 34.0 10.0 39.0 7.0 41.0 46 26.58799577799173 33.0 10.0 39.0 7.0 41.0 47 26.482782095697424 33.0 10.0 39.0 7.0 41.0 48 26.34999873374091 33.0 10.0 39.0 7.0 41.0 49 26.262651752566963 33.0 10.0 39.0 7.0 41.0 50 26.123500609735945 33.0 10.0 39.0 7.0 41.0 51 25.508429207746758 32.0 10.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 4.0 8 9.0 9 24.0 10 38.0 11 64.0 12 74.0 13 127.0 14 163.0 15 340.0 16 652.0 17 1388.0 18 2861.0 19 5586.0 20 9574.0 21 15830.0 22 24494.0 23 38913.0 24 67975.0 25 121715.0 26 173961.0 27 171096.0 28 137496.0 29 102743.0 30 81013.0 31 71953.0 32 70048.0 33 77278.0 34 101248.0 35 145345.0 36 175710.0 37 181788.0 38 272867.0 39 277240.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.3275387314316 11.456167905096672 13.41852610017526 52.79776726329647 2 63.980165661028025 14.464713651603619 13.499051593404635 8.056069093963721 3 15.843047400584712 14.709595282133256 61.7309890513659 7.716368265916125 4 13.757110903263387 13.997313813770631 63.50396639562999 8.741608887335993 5 13.008859091976339 21.95641750837126 56.90465326606851 8.130070133583896 6 13.022938176080409 19.499660256247918 60.425454468971715 7.0519470986999595 7 40.25866883118277 3.7614762778163855 53.67479118529148 2.305063705709369 8 40.596223457385236 4.9531763143447405 52.018481373328804 2.4321188549412223 9 37.65833067562005 5.164019183610573 52.70432163495939 4.473328505809983 10 19.242201882905803 17.88421412741657 56.2056353251088 6.667948664568827 11 13.33293557059137 14.584171246303704 62.10532957719395 9.977563605910984 12 11.627906976744185 13.679718864727903 63.6351422524045 11.057231906123414 13 12.667956390895469 13.795055751885332 64.57899889985693 8.957988957362266 14 10.753630193110949 16.325384803259823 63.11661988662045 9.804365117008778 15 9.848319330797095 15.856826016430464 63.81117372774228 10.483680925030164 16 11.365941579527295 16.58889546580521 61.607196128938654 10.43796682572884 17 11.61889292899463 16.563398587885032 61.60899893848857 10.20870954463177 18 11.195619001097567 15.983795317588513 62.59590839495437 10.224677286359556 19 10.675723066132635 16.787977148959715 61.844651901084134 10.691647883823519 20 11.234636950642079 17.75883301562392 61.98754601993306 9.018984013800937 21 10.866262865943511 17.608341342243218 62.5754765533887 8.949919238424568 22 10.81398138899608 15.389597874745084 62.7695361242256 11.026884612033239 23 10.366026139879994 16.738314038263344 62.09691646596103 10.798743355895638 24 10.365124735105038 16.93027033129201 61.67218312080928 11.032421812793682 25 10.425561779063973 18.360499240888405 60.54688656936932 10.667052410678298 26 10.3936262956084 17.466219856058533 61.28934363567451 10.850810212658555 27 11.191584141628718 17.1711600263897 61.1452905678292 10.491965264152377 28 9.888109913005854 17.5902703227072 61.29337849514336 11.228241269143584 29 11.195404380913054 16.74616913701653 61.13614774796894 10.922278734101473 30 11.291468375501191 18.93525209501493 59.38557675096805 10.387702778515832 31 11.352978520382694 18.556404545312116 58.3235502299226 11.767066704382586 32 12.26704588622469 19.469055417936325 56.54224562249941 11.72165307333958 33 12.626620543358214 20.74471487064627 53.4193931657207 13.209271420274826 34 13.028260756656337 21.599933381894726 50.43175142518533 14.9400544362636 35 14.183089045485314 23.30603507666448 46.930394810999026 15.580481066851181 36 15.640703490625604 24.50001008714867 45.19561985957831 14.663666562647418 37 14.852661097129799 24.531473406198316 45.73856600235997 14.877299494311922 38 15.27383174721863 24.78326580666928 44.62679052254435 15.316111923567743 39 16.584903530373264 24.00844401653949 43.38092035144484 16.025732101642404 40 16.990106438734305 23.647839182520304 42.75856474039328 16.603489638352112 41 17.04406195312094 23.668056403901453 41.36379108527847 17.924090557699135 42 17.543526046520213 23.41411780158536 42.344605328504095 16.697750823390336 43 17.672856169707906 23.13910349715006 42.74620261776532 16.44183771537672 44 16.7246641945283 23.377417750033587 42.08178145054915 17.816136604888964 45 16.248121536835047 22.841682845451576 42.30490059436914 18.605295023344237 46 16.563741980180254 23.26740344345209 42.12869742288375 18.040157153483907 47 14.816476134020862 23.705357391969855 43.633914624949085 17.8442518490602 48 15.422305990864906 23.191256201986782 42.929531179376546 18.456906627771765 49 16.065222215592843 22.129744769384175 43.48179183816608 18.323241176856904 50 15.311948291988188 22.19876662072364 42.91463653857133 19.57464854871685 51 15.109690230102885 21.92242167114436 41.640865743485094 21.32702235526766 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6853.0 1 8452.0 2 10051.0 3 159879.5 4 309708.0 5 203922.0 6 98136.0 7 95022.0 8 91908.0 9 92522.5 10 93137.0 11 92761.0 12 92385.0 13 90278.5 14 88172.0 15 83739.0 16 79306.0 17 74840.0 18 70374.0 19 64922.0 20 59470.0 21 55322.0 22 51174.0 23 47704.0 24 44234.0 25 42306.0 26 38735.0 27 37092.0 28 37035.0 29 36978.0 30 37803.5 31 38629.0 32 39918.0 33 41207.0 34 42889.5 35 44572.0 36 46128.5 37 47685.0 38 51462.5 39 55240.0 40 59561.5 41 63883.0 42 69928.0 43 75973.0 44 82837.0 45 89701.0 46 112436.5 47 135172.0 48 129198.5 49 123225.0 50 116305.0 51 109385.0 52 94134.0 53 78883.0 54 68165.0 55 57447.0 56 51305.5 57 45164.0 58 40256.5 59 35349.0 60 30060.0 61 24771.0 62 21429.5 63 18088.0 64 15457.0 65 12826.0 66 10828.0 67 8830.0 68 7224.0 69 5618.0 70 4475.5 71 3333.0 72 2744.5 73 2156.0 74 1858.5 75 1148.0 76 735.0 77 589.5 78 444.0 79 338.0 80 232.0 81 192.0 82 152.0 83 97.5 84 43.0 85 29.5 86 16.0 87 12.5 88 9.0 89 7.5 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2329697.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.62806507977512 #Duplication Level Percentage of deduplicated Percentage of total 1 81.55341286661762 33.1335736542271 2 7.598846455995798 6.174528566908316 3 2.924943679924713 3.565044065479745 4 1.582555651935285 2.5718469607677084 5 1.0777743707329563 2.189394363772611 6 0.7639637707704083 1.8623021878470332 7 0.6010112883863599 1.7092548016768367 8 0.46548727023023423 1.5129477686976658 9 0.38367758800709173 1.402927021368294 >10 2.8333839381611954 21.721501146797543 >50 0.14273663644371895 3.940340783113197 >100 0.06192382727689411 4.735145623973285 >500 0.005578887568157151 1.4835524846021009 >1k 0.0041568181880386615 3.614328684289441 >5k 4.375598092672275E-4 1.197383872267152 >10k+ 1.0938995231680688E-4 9.185928014211923 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 206690 8.87196918740935 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCC 7749 0.3326183619586582 No Hit GAATCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTC 6572 0.28209677052423554 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCG 6364 0.2731685708484837 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGC 6257 0.26857569889989985 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4936 0.21187304615149521 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCG 4177 0.1792937021423816 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGT 3968 0.17032257842972712 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 3528 0.15143600219255982 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 3517 0.1509638377866306 No Hit GCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGC 3252 0.13958896800742757 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCT 3125 0.13413761532079066 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTC 3025 0.12984521163052534 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTT 2928 0.125681580050968 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 2756 0.1182986457037117 No Hit CGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTG 2741 0.1176547851501719 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 2657 0.11404916605034904 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1462018451326502E-4 0.0 0.0 0.09889698102371253 0.0 2 2.1462018451326502E-4 0.0 0.0 0.4144315762951148 0.0 3 2.1462018451326502E-4 0.0 0.0 0.645963831348025 0.0 4 2.1462018451326502E-4 0.0 0.0 0.9654903620513741 0.0 5 2.1462018451326502E-4 0.0 0.0 1.852558508681601 0.0 6 2.1462018451326502E-4 0.0 0.0 2.454138885872283 0.0 7 2.1462018451326502E-4 0.0 0.0 3.048722645047832 0.0 8 2.1462018451326502E-4 0.0 0.0 3.7550376722809875 0.0 9 2.1462018451326502E-4 0.0 0.0 4.159510872014687 0.0 10 2.5754422141591806E-4 0.0 0.0 5.156936717521635 0.0 11 2.5754422141591806E-4 0.0 0.0 6.299660427944063 0.0 12 2.5754422141591806E-4 0.0 0.0 7.2981593743735775 0.0 13 2.5754422141591806E-4 0.0 0.0 7.620948131881528 0.0 14 2.5754422141591806E-4 0.0 0.0 7.785433041292494 0.0 15 2.5754422141591806E-4 0.0 0.0 8.04001550416213 0.0 16 2.5754422141591806E-4 0.0 0.0 8.455691877527421 0.0 17 2.5754422141591806E-4 0.0 0.0 8.994989477172354 0.0 18 2.5754422141591806E-4 0.0 0.0 9.523942383923746 0.0 19 2.5754422141591806E-4 0.0 0.0 10.011301898916468 0.0 20 3.0046825831857104E-4 0.0 0.0 10.374052934780789 0.0 21 3.43392295221224E-4 0.0 0.0 10.776852097075285 0.0 22 3.43392295221224E-4 0.0 0.0 11.21751025991792 0.0 23 3.43392295221224E-4 0.0 0.0 11.617948600182771 0.0 24 3.43392295221224E-4 0.0 0.0 11.920219668051253 0.0 25 3.43392295221224E-4 0.0 0.0 12.165101298580888 0.0 26 3.43392295221224E-4 0.0 0.0 12.397320338224242 0.0 27 3.43392295221224E-4 0.0 0.0 12.627779492354586 0.0 28 3.8631633212387706E-4 0.0 0.0 12.85180004094953 0.0 29 4.2924036902653004E-4 0.0 0.0 13.082817207559609 0.0 30 4.721644059291831E-4 0.0 0.0 13.333064342702077 0.0 31 5.150884428318361E-4 0.0 0.0 13.54944441272835 0.0 32 5.150884428318361E-4 0.0 0.0 13.759471725293032 0.0 33 5.150884428318361E-4 0.0 0.0 13.9563642825655 0.0 34 5.150884428318361E-4 0.0 0.0 14.153771928280802 0.0 35 5.580124797344891E-4 0.0 0.0 14.362253975516987 0.0 36 5.580124797344891E-4 0.0 0.0 14.553265939733794 0.0 37 5.580124797344891E-4 0.0 0.0 14.743676967433963 0.0 38 6.009365166371421E-4 0.0 0.0 14.951429306042803 0.0 39 6.009365166371421E-4 0.0 0.0 15.20897352745872 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATCG 20 7.034779E-4 45.000004 2 TACTACG 25 3.892045E-5 44.999996 1 CGTTATT 7605 0.0 44.64497 1 CGTTTTT 101975 0.0 44.582985 1 GTTATTT 8000 0.0 42.946877 2 CCGATGA 1165 0.0 40.55794 18 CGTAAGG 140 0.0 40.17857 2 TACGGCT 690 0.0 39.782608 7 ACGGCTG 690 0.0 39.782608 8 CACGCGA 40 3.4602635E-7 39.375004 41 TACGCTT 40 3.4602635E-7 39.375004 15 GTTTTTT 116565 0.0 39.16677 2 CCGTCGA 100 0.0 38.249996 41 CGTCGAA 100 0.0 38.249996 42 CGATGAA 1270 0.0 38.09055 19 CGACCAC 2095 0.0 37.696896 12 TGCGTAG 90 0.0 37.5 1 CGCGACC 30 1.14028204E-4 37.499996 10 CGCTATC 30 1.14028204E-4 37.499996 1 TCGCTTC 30 1.14028204E-4 37.499996 14 >>END_MODULE