##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935220.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3416412 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95573806672029 33.0 31.0 34.0 30.0 34.0 2 32.100195175523325 33.0 31.0 34.0 30.0 34.0 3 32.01541910050661 33.0 31.0 34.0 30.0 34.0 4 35.761441243035094 37.0 35.0 37.0 35.0 37.0 5 33.401596762919695 37.0 35.0 37.0 30.0 37.0 6 34.34330139339166 37.0 35.0 37.0 29.0 37.0 7 35.55764790663421 37.0 35.0 37.0 32.0 37.0 8 35.46289147795992 37.0 35.0 37.0 33.0 37.0 9 37.541106576138944 39.0 37.0 39.0 35.0 39.0 10 37.16311791434991 39.0 37.0 39.0 34.0 39.0 11 37.02941389972872 39.0 37.0 39.0 33.0 39.0 12 37.243181442987556 39.0 37.0 39.0 34.0 39.0 13 37.22064054335367 39.0 37.0 39.0 34.0 39.0 14 38.31406545814732 40.0 38.0 41.0 33.0 41.0 15 38.39442198423375 40.0 38.0 41.0 33.0 41.0 16 38.39238036864406 40.0 38.0 41.0 33.0 41.0 17 38.28880533144129 40.0 38.0 41.0 33.0 41.0 18 37.92751810964251 39.0 37.0 40.0 33.0 41.0 19 37.46872098564225 38.0 37.0 40.0 33.0 41.0 20 36.91179108374517 38.0 35.0 40.0 33.0 41.0 21 36.8250281289259 38.0 35.0 40.0 33.0 41.0 22 36.81282204839463 38.0 35.0 40.0 33.0 41.0 23 36.58072269972123 38.0 35.0 40.0 32.0 41.0 24 36.28519716006149 37.0 35.0 40.0 32.0 41.0 25 36.116283691779564 37.0 35.0 40.0 31.0 41.0 26 36.33327245074657 37.0 35.0 40.0 32.0 41.0 27 36.24417049231767 37.0 35.0 40.0 32.0 41.0 28 36.24366323499625 37.0 35.0 40.0 32.0 41.0 29 36.22478202277711 37.0 35.0 40.0 32.0 41.0 30 35.8203785140668 37.0 35.0 40.0 31.0 41.0 31 35.53699670882786 37.0 35.0 40.0 30.0 41.0 32 34.94411534674389 37.0 35.0 40.0 24.0 41.0 33 34.26224793730967 37.0 34.0 40.0 20.0 41.0 34 33.680362907049854 37.0 33.0 40.0 15.0 41.0 35 33.17558655103659 37.0 33.0 40.0 12.0 41.0 36 32.873688536394326 37.0 33.0 40.0 10.0 41.0 37 32.78787833551691 37.0 33.0 40.0 10.0 41.0 38 32.655045410213994 37.0 33.0 40.0 10.0 41.0 39 32.49628791843607 37.0 32.0 40.0 10.0 41.0 40 32.343400620299896 37.0 31.0 40.0 10.0 41.0 41 32.19004382375428 36.0 31.0 40.0 9.0 41.0 42 32.21573364102456 37.0 31.0 40.0 8.0 41.0 43 32.10994224349991 36.0 31.0 40.0 8.0 41.0 44 32.01824487210559 36.0 31.0 40.0 8.0 41.0 45 31.990295959620795 36.0 31.0 40.0 8.0 41.0 46 31.89434441747658 36.0 31.0 40.0 8.0 41.0 47 31.786825769257337 35.0 30.0 40.0 8.0 41.0 48 31.748216257289812 35.0 30.0 40.0 8.0 41.0 49 31.72949749620362 35.0 30.0 40.0 8.0 41.0 50 31.63422298013237 35.0 30.0 40.0 8.0 41.0 51 30.853746854887525 35.0 27.0 39.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 25.0 9 60.0 10 81.0 11 86.0 12 113.0 13 158.0 14 213.0 15 381.0 16 700.0 17 1272.0 18 2451.0 19 4623.0 20 8321.0 21 13769.0 22 21058.0 23 31152.0 24 48727.0 25 80309.0 26 115786.0 27 128006.0 28 118979.0 29 103774.0 30 94039.0 31 95925.0 32 108103.0 33 135605.0 34 197250.0 35 267780.0 36 334238.0 37 368906.0 38 564502.0 39 569857.0 40 161.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.3537606120105 14.06700948246289 16.61544333645942 34.963786569067196 2 50.01677198183357 20.37271851287257 18.034563746995385 11.575945758298472 3 22.18722449165967 20.881410087542136 45.5093530873911 11.422012333407094 4 19.570502620878276 18.581716725031995 48.550028509442065 13.29775214464766 5 19.046941645211408 25.774116236566314 41.8824778744484 13.296464243773878 6 18.426641751638854 26.74955479608431 44.18743992235129 10.636363529925548 7 54.79444516644948 5.266841352857911 36.02018726078705 3.9185262199055617 8 54.51049229425491 7.1289996639749535 33.90501496892061 4.455493072849528 9 49.572680344173946 6.608746251915752 35.26029647478114 8.558276929129157 10 27.165195532623116 20.261783414880874 40.537967903168585 12.035053149327423 11 20.766728368826712 17.717652320621752 45.9695142154986 15.546105095052939 12 17.883996426660485 16.098760922277524 49.089541893659195 16.927700757402793 13 18.400122701828703 16.153496709413268 51.35305694980582 14.09332363895221 14 14.728961261112536 19.773347008498977 49.82104031949308 15.676651410895406 15 13.079189512271938 18.85963987949931 51.96396102109464 16.097209587134103 16 15.550202961469516 19.73400749089981 47.813027234420204 16.902762313210467 17 15.320107762178568 20.375791912685003 48.07417840705395 16.22992191808248 18 15.242365382161168 19.390811178511257 48.98498775908761 16.38183568023997 19 15.10376968585756 20.970245977358704 47.17212092686714 16.753863409916605 20 16.07209552009535 22.29174935575686 47.73314810977131 13.903007014376486 21 15.301169765239086 22.766311557271194 47.999831402067436 13.932687275422284 22 14.52316055557702 19.477276159901088 48.59612950662859 17.403433777893298 23 14.807933001054908 21.01956672672968 47.7140637604598 16.458436511755608 24 15.040838165888657 20.892562138290113 46.51060820533355 17.55599149048768 25 14.964383686745041 23.286682051228013 44.860836456492954 16.888097805533995 26 14.865303130887025 20.95587417442627 46.88070408369951 17.2981186109872 27 16.319021242168684 20.34587748784397 46.5901068138152 16.74499445617215 28 14.581730774859706 20.726744900790653 46.64674518178721 18.04477914256243 29 17.4600136049165 19.539710081805122 46.08677173596159 16.913504577316786 30 17.55669398187338 20.75903023405842 46.54854274016132 15.135733043906882 31 18.756900514340778 20.541638420658867 43.87269451108356 16.8287665539168 32 20.482892578529754 20.656144516527867 42.72810187998403 16.13286102495835 33 19.066991920178246 20.042459750170647 43.46138580475657 17.42916252489454 34 19.239073039200193 20.584548936135338 42.73056059983398 17.445817424830494 35 19.01491974621328 21.59839035807157 41.09864384037991 18.288046055335247 36 20.349302133349255 22.49447666147994 41.15756530535544 15.998655899815361 37 19.875471693695022 22.676012143734418 40.80713918578907 16.641376976781487 38 20.289824529360043 22.72542070452861 39.01929860918414 17.96545615692721 39 20.35498060538366 21.782238207803978 40.20287951218998 17.65990167462238 40 19.141280384215957 21.652365112872804 40.94225169563858 18.264102807272657 41 17.82311383989987 22.852893620558646 39.88696328194609 19.437029257595395 42 18.742265277138706 22.39803044831829 40.373321484645295 18.486382789897707 43 19.90190293208196 21.69378283415466 39.90569638556474 18.498617848198638 44 19.858670441387048 21.86431261803319 38.68072703175144 19.596289908828325 45 19.5169376527187 21.201980323216286 38.155409827620325 21.125672196444693 46 20.285843744841078 22.26206909471106 38.637377459158905 18.814709701288955 47 16.918978156030363 22.905053605946822 41.936950227314505 18.23901801070831 48 17.932614684645763 22.420305279339843 40.09329085602088 19.553789179993515 49 18.72435174680337 20.763918403283913 41.19781220766114 19.313917642251578 50 17.85788716349199 20.668174681507967 40.57637076558682 20.897567389413222 51 17.371148444625533 20.458773707620743 39.10997853888817 23.06009930886556 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 10008.0 1 13209.5 2 16411.0 3 191861.5 4 367312.0 5 225225.5 6 83139.0 7 77795.0 8 72451.0 9 71769.0 10 71087.0 11 68824.5 12 66562.0 13 63739.5 14 60917.0 15 56724.0 16 52531.0 17 49052.5 18 45574.0 19 42185.5 20 38797.0 21 38286.5 22 37776.0 23 36426.5 24 35077.0 25 34716.0 26 37863.0 27 41371.0 28 44448.5 29 47526.0 30 50288.0 31 53050.0 32 56499.5 33 59949.0 34 66501.5 35 73054.0 36 76877.0 37 80700.0 38 83574.5 39 86449.0 40 94675.0 41 102901.0 42 112285.0 43 121669.0 44 134702.0 45 147735.0 46 216174.5 47 284614.0 48 267478.0 49 250342.0 50 255136.0 51 259930.0 52 223435.0 53 186940.0 54 162668.0 55 138396.0 56 124377.0 57 110358.0 58 102963.0 59 95568.0 60 87090.0 61 78612.0 62 72175.0 63 65738.0 64 56677.0 65 47616.0 66 39576.5 67 31537.0 68 27092.0 69 22647.0 70 19015.0 71 15383.0 72 12448.5 73 9514.0 74 7549.0 75 4705.0 76 3826.0 77 2904.5 78 1983.0 79 1368.0 80 753.0 81 549.0 82 345.0 83 265.5 84 186.0 85 121.5 86 57.0 87 51.0 88 45.0 89 30.5 90 16.0 91 10.0 92 4.0 93 7.0 94 10.0 95 6.0 96 2.0 97 3.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3416412.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.644067259789296 #Duplication Level Percentage of deduplicated Percentage of total 1 76.41722121683247 21.88900024341147 2 8.762881233462824 5.020091188817091 3 3.608764353460478 3.101090665957559 4 2.0121195263541574 2.305411481904955 5 1.2630332871492238 1.8089205214227566 6 0.9497795139902282 1.6323328968423652 7 0.7027924320321152 1.409158358495916 8 0.5563495574318799 1.2748891314426218 9 0.4579100490323547 1.1804765619074566 >10 4.586103128957637 29.038269580958843 >50 0.5593434215651067 10.64708509626456 >100 0.11389042831849959 5.573649458388417 >500 0.004958677595884676 0.9928667156604115 >1k 0.0035871284736179 2.5903866621882807 >5k 7.385264504507442E-4 1.573162164436898 >10k+ 5.27518893179103E-4 9.96320927190045 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 250708 7.33834209691337 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTC 26834 0.7854439101607184 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCG 18000 0.5268685392745371 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGC 17427 0.5100965574409644 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16714 0.4892267091908119 No Hit GCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC 9807 0.2870555424814103 No Hit GAACTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCT 9464 0.27701576976079 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCC 8254 0.24159849573177944 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7357 0.21534288019126496 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTT 6295 0.1842576363740673 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCT 5713 0.16722222027085726 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTC 5166 0.15121127077179214 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCT 4966 0.14535717589096397 No Hit CTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGCT 4730 0.1384493439315867 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGT 4609 0.13490761652868566 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCG 4367 0.12782416172288355 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGGTTCTT 4366 0.1277948912484794 No Hit CCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC 4178 0.12229204206050089 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTT 4063 0.11892593750402469 No Hit CGCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTG 3429 0.10036845673179932 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0489332082898666E-4 0.0 0.0 0.14904525566588572 0.0 2 2.0489332082898666E-4 0.0 0.0 0.6540780210349337 0.0 3 2.0489332082898666E-4 0.0 0.0 0.9055113961665046 0.0 4 2.0489332082898666E-4 0.0 0.0 1.4907452614028986 0.0 5 2.0489332082898666E-4 0.0 0.0 3.202570415980274 0.0 6 2.0489332082898666E-4 0.0 0.0 4.354041608564775 0.0 7 2.0489332082898666E-4 0.0 0.0 5.38919193586722 0.0 8 2.3416379523312763E-4 0.0 0.0 6.615946788619171 0.0 9 2.3416379523312763E-4 0.0 0.0 7.37156408536207 0.0 10 2.3416379523312763E-4 0.0 0.0 9.289980248283872 0.0 11 2.6343426963726857E-4 0.0 0.0 11.153221566953869 0.0 12 2.927047440414095E-4 0.0 0.0 13.008911103227597 0.0 13 2.927047440414095E-4 0.0 0.0 13.613053694929066 0.0 14 2.927047440414095E-4 0.0 0.0 13.965177502010881 0.0 15 2.927047440414095E-4 0.0 0.0 14.43684192655921 0.0 16 3.219752184455505E-4 0.0 0.0 15.118873250650097 0.0 17 3.219752184455505E-4 0.0 0.0 15.841210017995488 0.0 18 3.219752184455505E-4 0.0 0.0 16.53811074308368 0.0 19 3.219752184455505E-4 0.0 0.0 17.169416335032192 0.0 20 3.219752184455505E-4 0.0 0.0 17.6628579925372 0.0 21 3.5124569284969144E-4 0.0 0.0 18.180740496169665 0.0 22 3.5124569284969144E-4 0.0 0.0 18.74744615110824 0.0 23 3.5124569284969144E-4 0.0 0.0 19.210153810488897 0.0 24 3.5124569284969144E-4 0.0 0.0 19.561077528120144 0.0 25 3.5124569284969144E-4 0.0 0.0 19.852026043697308 0.0 26 3.5124569284969144E-4 0.0 0.0 20.11827027887737 0.0 27 3.5124569284969144E-4 0.0 0.0 20.405120928037952 0.0 28 3.805161672538324E-4 0.0 0.0 20.649412307414913 0.0 29 3.805161672538324E-4 0.0 0.0 20.90160671488099 0.0 30 3.805161672538324E-4 0.0 0.0 21.196096957861055 0.0 31 4.097866416579733E-4 0.0 0.0 21.429558261708483 0.0 32 4.097866416579733E-4 0.0 0.0 21.672503199262852 0.0 33 4.097866416579733E-4 0.0 0.0 21.88808024324935 0.0 34 4.390571160621143E-4 0.0 0.0 22.101725435925175 0.0 35 4.390571160621143E-4 0.0 0.0 22.334484248386904 0.0 36 4.6832759046625525E-4 0.0 0.0 22.528752387007188 0.0 37 4.6832759046625525E-4 0.0 0.0 22.74684669179244 0.0 38 4.6832759046625525E-4 0.0 0.0 22.99743122316629 0.0 39 4.975980648703962E-4 0.0 0.0 23.37472763823567 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATT 5785 0.0 44.45549 1 CGTTTTT 83705 0.0 44.26886 1 GTTAGCG 80 0.0 42.187504 1 CGATGAA 2605 0.0 40.59501 19 CCGATGA 2540 0.0 40.482285 18 AATAGCG 45 1.9301297E-8 40.0 1 GTTTTTT 95550 0.0 39.188385 2 TACGGCT 2240 0.0 38.77232 7 GTTATTT 6860 0.0 38.374634 2 ACCACCG 3470 0.0 37.867435 14 GATGAAT 2950 0.0 37.830505 20 CGACCAC 4705 0.0 37.10946 12 TCACGAC 250 0.0 36.899998 25 GCGTAAG 135 0.0 36.666664 1 AACGGGA 1145 0.0 36.55022 4 CCACCGA 3520 0.0 36.434658 15 TAGCGTA 25 0.0021076894 36.0 1 CGCGATC 25 0.0021076894 36.0 41 TACGTAG 75 1.8189894E-12 36.0 1 GCGACCA 4900 0.0 35.678574 11 >>END_MODULE