##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935218.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 562099 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.582335140251093 31.0 31.0 34.0 30.0 34.0 2 31.694020092545976 31.0 31.0 34.0 30.0 34.0 3 31.698709657907237 31.0 31.0 34.0 30.0 34.0 4 35.50741951150954 37.0 35.0 37.0 33.0 37.0 5 32.93498476247067 37.0 35.0 37.0 28.0 37.0 6 33.95629239689094 37.0 35.0 37.0 26.0 37.0 7 35.31002012101071 37.0 35.0 37.0 32.0 37.0 8 35.250694272717084 37.0 35.0 37.0 33.0 37.0 9 37.33242364779158 39.0 37.0 39.0 34.0 39.0 10 36.60616368290995 39.0 35.0 39.0 32.0 39.0 11 36.47622038110724 39.0 35.0 39.0 32.0 39.0 12 36.91647378842517 39.0 37.0 39.0 33.0 39.0 13 36.95018493183585 39.0 37.0 39.0 33.0 39.0 14 37.94205824952544 40.0 37.0 41.0 33.0 41.0 15 38.04785633847418 40.0 37.0 41.0 33.0 41.0 16 38.06280210425565 40.0 37.0 41.0 33.0 41.0 17 37.953716338225114 40.0 37.0 41.0 33.0 41.0 18 37.79183560191354 39.0 37.0 40.0 33.0 41.0 19 37.49080144245053 39.0 36.0 40.0 33.0 41.0 20 37.151551595003724 39.0 35.0 40.0 33.0 41.0 21 37.10942022668605 39.0 35.0 40.0 33.0 41.0 22 37.107103908742054 39.0 35.0 40.0 33.0 41.0 23 36.80110087368951 38.0 35.0 40.0 32.0 41.0 24 36.50752981236401 38.0 35.0 40.0 31.0 41.0 25 36.34408173649126 38.0 35.0 40.0 31.0 41.0 26 36.62294008706651 38.0 35.0 40.0 32.0 41.0 27 36.50789985394032 38.0 35.0 40.0 31.0 41.0 28 36.573423898637074 38.0 35.0 40.0 31.0 41.0 29 36.62598581388688 39.0 35.0 40.0 32.0 41.0 30 36.26340377762636 38.0 35.0 40.0 31.0 41.0 31 36.06998055502678 38.0 35.0 40.0 30.0 41.0 32 35.63099916562741 38.0 35.0 40.0 27.0 41.0 33 35.24863769549492 38.0 35.0 40.0 24.0 41.0 34 34.9442749408912 38.0 35.0 40.0 21.0 41.0 35 34.59324069247588 38.0 35.0 40.0 18.0 41.0 36 34.39224051279223 38.0 34.0 40.0 18.0 41.0 37 34.35359607471282 38.0 34.0 40.0 17.0 41.0 38 34.25799191957289 38.0 34.0 40.0 16.0 41.0 39 34.13044499278597 38.0 34.0 40.0 15.0 41.0 40 34.01951969315014 38.0 34.0 40.0 15.0 41.0 41 33.90084486896436 38.0 33.0 40.0 15.0 41.0 42 33.94819951645529 38.0 34.0 40.0 15.0 41.0 43 33.842810608095725 38.0 33.0 40.0 15.0 41.0 44 33.75971136757048 38.0 33.0 40.0 14.0 41.0 45 33.774909757889624 38.0 33.0 40.0 14.0 41.0 46 33.614124913938646 38.0 33.0 40.0 12.0 41.0 47 33.49237589819587 38.0 33.0 40.0 12.0 41.0 48 33.43561721333786 38.0 33.0 40.0 12.0 41.0 49 33.3924753468695 38.0 33.0 40.0 10.0 41.0 50 33.27002538698699 38.0 33.0 40.0 10.0 41.0 51 32.30528252140637 36.0 31.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 14.0 10 9.0 11 8.0 12 21.0 13 34.0 14 29.0 15 57.0 16 104.0 17 192.0 18 371.0 19 750.0 20 1336.0 21 2258.0 22 3560.0 23 5384.0 24 7376.0 25 10559.0 26 13583.0 27 13985.0 28 13045.0 29 11992.0 30 12110.0 31 13917.0 32 16751.0 33 21521.0 34 31518.0 35 44556.0 36 58726.0 37 77781.0 38 115239.0 39 85287.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.70919001812848 21.23077963134608 22.064796414866418 20.995233935659023 2 38.77057244364427 24.699741504610397 23.009647766674554 13.520038285070779 3 24.811643500522152 24.626266903161188 38.229386638296816 12.332702958019851 4 21.223485542582356 23.01213843113046 41.514928864844094 14.24944716144309 5 18.97655039414765 31.229552089578526 35.467951375113635 14.325946141160188 6 19.47023567022891 32.42916283430499 37.05059073223756 11.050010763228542 7 61.54004899492794 6.960695535839773 26.970871679188186 4.528383790044103 8 59.80209891851791 8.167600369329959 25.610790981659814 6.419509730492315 9 55.645891560027685 8.050361235298409 27.23915182201 9.064595382663908 10 28.076726697610205 21.742789081638644 36.436286134648874 13.74419808610227 11 18.455289904447437 22.814664320697954 39.69656590742912 19.03347986742549 12 15.917302823879778 19.98811597245325 45.292021512224714 18.802559691442255 13 18.38964310557393 21.77338867352548 46.54251297369324 13.294455247207344 14 15.31900964065049 25.453523311729786 42.45640002917636 16.771067018443368 15 13.072608206027764 24.456723815555623 45.815950570984825 16.65471740743179 16 13.471292423576632 24.784957809923164 41.267819369897474 20.475930396602735 17 12.971914200167586 26.29661323005378 40.32261220888135 20.40886036089728 18 13.636387896082363 24.102159939797083 44.465298817468096 17.796153346652456 19 13.60667782721549 27.105011750599097 41.185271633644604 18.10303878854081 20 14.129717362955635 27.510456343099705 42.7791189808201 15.580707313124556 21 13.73975047100244 28.359950827167456 42.192033787642394 15.708264914187714 22 12.266166636126377 24.89116685850713 40.18082223949874 22.661844265867757 23 12.328433247524012 26.04879211669119 40.449102382320554 21.173672253464247 24 14.4757418177225 25.021037219422205 39.8129155184407 20.690305444414598 25 12.435353914523954 28.487152619022627 37.86699495996257 21.21049850649085 26 13.352807957317129 26.526465978413054 41.202172571023965 18.918553493245852 27 15.34907551872535 25.613993264531693 39.21319909837946 19.82373211836349 28 11.682461630424534 24.939556910793296 40.12229162478496 23.255689833997213 29 15.901825123332367 22.87888788273952 39.190783118276315 22.028503875651797 30 15.881899807685123 27.237728585178054 35.82536172453607 21.055009882600753 31 13.82977020062302 27.835665959199357 34.60155595366653 23.733007886511096 32 15.190918325775352 28.662744463163964 34.565975032867875 21.58036217819281 33 15.512747754399136 27.217625364926818 33.18383416444434 24.085792716229705 34 16.093606286437087 24.935109295693465 35.56811166716184 23.403172750707615 35 17.366513728008766 26.580193168819015 32.530212649373155 23.523080453799064 36 19.08080249208769 27.36902218292507 30.41937452299328 23.130800801993956 37 14.662363747311415 26.0247749951521 36.13171345261244 23.181147804924045 38 14.997536021234694 29.585713548680925 32.58927697789891 22.82747345218547 39 18.870519250167675 26.487504870138533 35.56526519349794 19.076710686195845 40 18.09556679517309 27.397842728771977 35.25660070556966 19.24998977048527 41 19.030099679949615 28.00681018824086 30.68729885660711 22.275791275202412 42 21.469349705301024 24.677681333715235 32.1866788590622 21.666290101921547 43 20.916600100694005 23.013561667962403 32.817350680218254 23.252487551125338 44 17.660234229201617 23.31190768885908 32.357645183499706 26.670212898439598 45 18.96623192711604 22.161576519438746 33.39376159715638 25.47842995628884 46 20.632664352720784 25.025484834522032 33.877840024621996 20.464010788135187 47 15.716626430575397 25.9141183314683 37.59426720204092 20.77498803591538 48 17.28503341937986 24.209614320609003 34.984228756856 23.521123503155138 49 19.463297390673173 21.558124102693654 37.16782986626911 21.810748640364064 50 18.03579084823136 20.417221877284963 35.96839702614664 25.578590248337036 51 17.178468561587906 21.15303531940103 32.2233272074848 29.44516891152626 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3946.0 1 5418.0 2 6890.0 3 16537.5 4 26185.0 5 17427.0 6 8669.0 7 8467.5 8 8266.0 9 8621.5 10 8977.0 11 8990.5 12 9004.0 13 8973.5 14 8943.0 15 8537.5 16 8132.0 17 7712.5 18 7293.0 19 6927.5 20 6562.0 21 6424.0 22 6286.0 23 6133.5 24 5981.0 25 5959.5 26 6231.0 27 6524.0 28 7133.5 29 7743.0 30 8156.5 31 8570.0 32 9171.5 33 9773.0 34 10363.0 35 10953.0 36 11583.5 37 12214.0 38 13031.5 39 13849.0 40 16208.5 41 18568.0 42 23310.0 43 28052.0 44 32109.0 45 36166.0 46 49851.5 47 63537.0 48 66874.5 49 70212.0 50 67211.5 51 64211.0 52 50991.5 53 37772.0 54 29017.0 55 20262.0 56 15862.0 57 11462.0 58 9410.0 59 7358.0 60 6014.5 61 4671.0 62 4099.5 63 3528.0 64 2779.5 65 2031.0 66 1714.5 67 1398.0 68 1088.5 69 779.0 70 661.5 71 544.0 72 439.0 73 334.0 74 263.0 75 158.5 76 125.0 77 113.0 78 101.0 79 83.0 80 65.0 81 45.0 82 25.0 83 13.5 84 2.0 85 1.5 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 562099.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.68385628193659 #Duplication Level Percentage of deduplicated Percentage of total 1 76.45635150711368 35.6927732559932 2 10.533766940276012 9.835137238945205 3 4.270606837262627 5.981051874822726 4 2.2689262565960635 4.23688909108972 5 1.4142343367130596 3.30109562620462 6 0.995006017394829 2.787043074943338 7 0.7497180528815597 2.449981088288725 8 0.567831851644433 2.1206864443579714 9 0.46939208540306326 1.9721729389351599 >10 2.1493310110829413 16.098355880515985 >50 0.07105394266926239 2.2611069014104945 >100 0.04435964371362597 3.6463968208864177 >500 0.0043181954057512 1.5163234304676192 >1k 0.004710758624455856 5.234376338048844 >5k 0.0 0.0 >10k+ 3.925632187046546E-4 2.8666099950899806 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15642 2.7827838156623654 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCC 4588 0.816226323121016 No Hit GCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 3100 0.551504272379065 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3098 0.5511484631710784 No Hit GAATCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTC 3094 0.5504368447551055 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCG 2918 0.519125634452294 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC 2479 0.44102551329925865 No Hit CCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 2180 0.3878320367052779 No Hit CTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCT 1782 0.3170260043159657 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1509 0.26845804742580937 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCG 1483 0.2638325277219849 No Hit TCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 1253 0.22291446880353818 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1078 0.19178116310472 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC 991 0.17630346255730753 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCTATAGT 930 0.16545128171371945 No Hit ACTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 826 0.1469492028984218 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 796 0.1416120647786244 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 772 0.1373423542827865 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCT 761 0.13538540363886076 No Hit GAACTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCT 723 0.1286250286871174 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGT 714 0.12702388725117816 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTC 671 0.11937398927946857 No Hit ACCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTG 568 0.10104981506816416 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7790460399324674E-4 0.0 0.0 0.3381966521911621 0.0 2 1.7790460399324674E-4 0.0 0.0 1.7329687474982165 0.0 3 1.7790460399324674E-4 0.0 0.0 2.3536779108306543 0.0 4 3.558092079864935E-4 0.0 0.0 3.3673783443841745 0.0 5 3.558092079864935E-4 0.0 0.0 6.2592176822944 0.0 6 3.558092079864935E-4 0.0 0.0 7.71839124424701 0.0 7 3.558092079864935E-4 0.0 0.0 9.313839732858447 0.0 8 3.558092079864935E-4 0.0 0.0 11.67676868309675 0.0 9 3.558092079864935E-4 0.0 0.0 12.480007970126259 0.0 10 3.558092079864935E-4 0.0 0.0 15.472719218500655 0.0 11 3.558092079864935E-4 0.0 0.0 19.48606917998431 0.0 12 3.558092079864935E-4 0.0 0.0 22.54300399040027 0.0 13 3.558092079864935E-4 0.0 0.0 23.53606748989057 0.0 14 3.558092079864935E-4 0.0 0.0 23.9304819969436 0.0 15 3.558092079864935E-4 0.0 0.0 24.780866004031317 0.0 16 3.558092079864935E-4 0.0 0.0 26.57450022149123 0.0 17 3.558092079864935E-4 0.0 0.0 28.925331658657996 0.0 18 3.558092079864935E-4 0.0 0.0 31.286481562856366 0.0 19 3.558092079864935E-4 0.0 0.0 32.93494562345779 0.0 20 3.558092079864935E-4 0.0 0.0 34.266917393555225 0.0 21 3.558092079864935E-4 0.0 0.0 35.90666412856098 0.0 22 3.558092079864935E-4 0.0 0.0 37.539472584011 0.0 23 3.558092079864935E-4 0.0 0.0 39.20056787149595 0.0 24 3.558092079864935E-4 0.0 0.0 40.3213668766534 0.0 25 3.558092079864935E-4 0.0 0.0 41.196479623696185 0.0 26 3.558092079864935E-4 0.0 0.0 41.93389420724819 0.0 27 3.558092079864935E-4 0.0 0.0 42.6106433208385 0.0 28 5.337138119797402E-4 0.0 0.0 43.28134367789304 0.0 29 5.337138119797402E-4 0.0 0.0 43.93122919628037 0.0 30 5.337138119797402E-4 0.0 0.0 44.571507866052066 0.0 31 5.337138119797402E-4 0.0 0.0 45.12923879957089 0.0 32 5.337138119797402E-4 0.0 0.0 45.70120210140918 0.0 33 5.337138119797402E-4 0.0 0.0 46.19257461763853 0.0 34 5.337138119797402E-4 0.0 0.0 46.643206979553426 0.0 35 5.337138119797402E-4 0.0 0.0 47.10415780849993 0.0 36 5.337138119797402E-4 0.0 0.0 47.54607284481915 0.0 37 5.337138119797402E-4 0.0 0.0 47.968240470095125 0.0 38 5.337138119797402E-4 0.0 0.0 48.39485571047093 0.0 39 5.337138119797402E-4 0.0 0.0 48.780908701136276 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGGAT 30 2.163515E-6 45.000004 4 CGATGTG 30 2.163515E-6 45.000004 10 GACGAAG 30 2.163515E-6 45.000004 1 TACGTAG 30 2.163515E-6 45.000004 1 CGGACCA 30 2.163515E-6 45.000004 19 ACAACGG 25 3.888254E-5 45.0 2 TAATACG 25 3.888254E-5 45.0 4 TCGTTAT 25 3.888254E-5 45.0 17 GGTACGT 25 3.888254E-5 45.0 8 GATCGAA 25 3.888254E-5 45.0 9 GCGAAAG 35 1.2104465E-7 45.0 1 CGTTGTT 35 1.2104465E-7 45.0 1 CGACCCA 20 7.030207E-4 45.0 34 GCACGAG 25 3.888254E-5 45.0 1 GCGTTAG 25 3.888254E-5 45.0 1 CGTTATT 485 0.0 45.0 1 CGTTAGG 50 2.1827873E-11 45.0 2 CGCTAGG 25 3.888254E-5 45.0 2 ACAATCG 20 7.030207E-4 45.0 1 CGAATGG 20 7.030207E-4 45.0 2 >>END_MODULE