##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935216.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 439093 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.599055325409424 31.0 31.0 34.0 30.0 34.0 2 31.706340114736513 31.0 31.0 34.0 30.0 34.0 3 31.71168522385918 31.0 31.0 34.0 30.0 34.0 4 35.543636541689345 37.0 35.0 37.0 33.0 37.0 5 33.00895026793868 37.0 35.0 37.0 28.0 37.0 6 33.99505116228225 37.0 35.0 37.0 27.0 37.0 7 35.28940566121528 37.0 35.0 37.0 32.0 37.0 8 35.14191071139827 37.0 35.0 37.0 32.0 37.0 9 37.19134670787282 39.0 37.0 39.0 34.0 39.0 10 36.76270630595341 39.0 37.0 39.0 32.0 39.0 11 36.569405570118406 39.0 35.0 39.0 32.0 39.0 12 36.842529942404 39.0 37.0 39.0 33.0 39.0 13 36.74059937188705 39.0 35.0 39.0 33.0 39.0 14 37.54745805558276 39.0 37.0 41.0 32.0 41.0 15 37.6963877811762 40.0 37.0 41.0 32.0 41.0 16 37.76220527314259 40.0 37.0 41.0 33.0 41.0 17 37.68807519136037 39.0 36.0 41.0 33.0 41.0 18 37.587479190057685 39.0 36.0 40.0 33.0 41.0 19 37.37482720061581 39.0 36.0 40.0 33.0 41.0 20 37.0499415841291 39.0 35.0 40.0 32.0 41.0 21 37.03410894730729 39.0 35.0 40.0 32.0 41.0 22 37.07610916138495 39.0 35.0 40.0 32.0 41.0 23 36.74178363125807 38.0 35.0 40.0 32.0 41.0 24 36.45687360080894 38.0 35.0 40.0 31.0 41.0 25 36.28720794911329 38.0 35.0 40.0 31.0 41.0 26 36.60146028290134 38.0 35.0 40.0 32.0 41.0 27 36.44811008146338 38.0 35.0 40.0 31.0 41.0 28 36.497776097546534 38.0 35.0 40.0 31.0 41.0 29 36.59203858863612 38.0 35.0 40.0 31.0 41.0 30 36.33570564777849 38.0 35.0 40.0 31.0 41.0 31 36.14850157028238 38.0 35.0 40.0 30.0 41.0 32 35.81831867053221 38.0 35.0 40.0 29.0 41.0 33 35.62273140314239 38.0 35.0 40.0 27.0 41.0 34 35.442815075621795 38.0 35.0 40.0 25.0 41.0 35 35.18829040772684 38.0 35.0 40.0 24.0 41.0 36 34.99593024712305 38.0 35.0 40.0 23.0 41.0 37 34.954672472574146 38.0 35.0 40.0 23.0 41.0 38 34.85828742430419 38.0 35.0 40.0 23.0 41.0 39 34.78113748112587 38.0 35.0 40.0 22.0 41.0 40 34.687865668548575 38.0 34.0 40.0 21.0 41.0 41 34.41472307688804 38.0 34.0 40.0 20.0 41.0 42 34.47541864707477 38.0 34.0 40.0 21.0 41.0 43 34.43637452658093 38.0 34.0 40.0 20.0 41.0 44 34.41266428751996 38.0 34.0 40.0 20.0 41.0 45 34.410329930105924 38.0 34.0 40.0 20.0 41.0 46 34.28015705101197 38.0 34.0 40.0 20.0 41.0 47 34.118455543586435 38.0 33.0 40.0 20.0 41.0 48 34.077054291459895 38.0 33.0 40.0 20.0 41.0 49 34.09625979006725 38.0 34.0 40.0 20.0 41.0 50 34.0399254827565 38.0 34.0 40.0 19.0 41.0 51 33.111773587827635 36.0 32.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 11.0 10 7.0 11 9.0 12 24.0 13 13.0 14 19.0 15 50.0 16 85.0 17 133.0 18 251.0 19 514.0 20 907.0 21 1627.0 22 2445.0 23 3582.0 24 4950.0 25 6505.0 26 7995.0 27 8583.0 28 8568.0 29 8700.0 30 9647.0 31 11679.0 32 14407.0 33 19905.0 34 28944.0 35 36782.0 36 46366.0 37 59767.0 38 87857.0 39 68749.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.44678462193658 21.28911187379439 20.24240878356066 18.02169472070837 2 36.170014097241356 26.353870364592467 22.756682525114268 14.719433013051905 3 25.35499313357307 27.597798188538647 33.97161876868909 13.07558990919919 4 23.196224945512682 22.739374118922413 38.13930078593828 15.925100149626617 5 21.370415834458758 30.465755546091604 32.21299360272197 15.950835016727662 6 20.285452056853558 33.25400313828734 34.53095357931007 11.92959122554903 7 61.7308861676228 7.563318021466979 25.461120992591546 5.24467481831867 8 58.21090292944775 10.775621565363146 23.646471248687636 7.36700425650147 9 53.035917220269965 9.671527444072213 25.353626680452663 11.93892865520516 10 30.45436843675486 23.976697419453284 31.67711623733469 13.891817906457174 11 23.103078391138094 21.92861193414607 36.17320248785565 18.795107186860186 12 19.980277526628758 19.51704991880991 40.97081939361365 19.531853160947684 13 20.827478461282688 21.190044022564695 43.987720141291256 13.994757374861361 14 15.918495626211303 26.11041396697283 39.99858799844224 17.972502408373625 15 13.288984338169818 23.487507202346656 44.8460804430952 18.37742801638833 16 15.018003019861395 25.61826310143865 37.5134652567907 21.850268621909255 17 14.96881070752665 25.971946717437994 37.38684060096608 21.672401974069274 18 15.594418494487499 23.505954319472185 41.29603523627113 19.603591949769182 19 14.978603621556253 25.614391484264154 38.34244681650584 21.06455807767375 20 15.547048119646636 28.180590444393328 40.23452890389963 16.037832532060406 21 14.821689254895887 28.39922294365886 40.57636992618876 16.202717875256496 22 13.316313400578009 23.61253766286413 39.137267048210745 23.933881888347116 23 13.577305946576237 26.207887622895377 39.24339490722922 20.971411523299164 24 16.393110343366896 24.758991830887762 36.26133871412207 22.586559111623277 25 13.447720642324063 29.613544283329503 34.19230094763524 22.746434126711197 26 13.281013361634095 25.21948653246579 37.846652075983904 23.652848029916214 27 18.07430316584414 24.751931823098978 36.58359390835199 20.590171102704893 28 11.757645874564158 24.902469408530767 38.67996073724701 24.659923979658068 29 15.687565048862087 22.606828166242686 34.79331257842871 26.912294206466512 30 19.839305113039835 24.877873252363393 33.75526369129091 21.52755794330586 31 16.044664797662453 25.98834415488291 34.258573923975106 23.708417123479535 32 16.748160412486648 27.496680657628335 30.01687569603706 25.73828323384795 33 17.585568433110982 24.285971309039315 30.667307381352018 27.461152876497692 34 14.445003678036317 23.12129776607689 35.54918889620195 26.884509659684852 35 16.121413914592125 26.53834153584776 29.124126324036137 28.216118225523978 36 18.207987829457544 28.085394210338126 30.554802741104957 23.15181521909937 37 17.356459793255645 25.119279970302415 35.83090598119305 21.693354255248888 38 15.672306322350845 27.014094963937023 29.893667173013462 27.419931540698666 39 17.52772191768031 23.221504328240258 31.905086166256353 27.345687587823083 40 18.556661117348717 23.665829334560105 33.4487227079457 24.32878684014548 41 16.44366910882205 29.025513957179918 29.93374979787881 24.59706713611923 42 18.258091110539226 26.772005019437795 32.72450255412863 22.245401315894355 43 20.144935127638107 23.848023083948046 31.779144736991938 24.22789705142191 44 19.273821263377005 20.331455978574013 32.04674180640548 28.347980951643503 45 19.05906038128597 19.089350092121716 31.68235430762959 30.169235218962726 46 21.743685278517308 22.188010284837155 32.05494052512793 24.013363911517605 47 14.807796981505057 24.274356457515832 38.29575966822518 22.622086892753927 48 16.36373160127809 24.378890121227165 34.071369846478994 25.186008431015754 49 19.075230076544152 20.606796282336543 36.981687250764644 23.336286390354662 50 17.676437565618215 19.96205815168996 34.97436761688299 27.387136665808836 51 16.979090989835864 19.993714315646116 31.220037668557687 31.80715702596033 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3544.0 1 4991.5 2 6439.0 3 12331.5 4 18224.0 5 11612.0 6 5000.0 7 4914.0 8 4828.0 9 5076.0 10 5324.0 11 5370.5 12 5417.0 13 5160.5 14 4904.0 15 4834.0 16 4764.0 17 4540.0 18 4316.0 19 4063.5 20 3811.0 21 3752.0 22 3693.0 23 3857.5 24 4022.0 25 4381.5 26 4689.5 27 4638.0 28 4962.0 29 5286.0 30 5331.5 31 5377.0 32 5907.0 33 6437.0 34 6848.0 35 7259.0 36 7691.5 37 8124.0 38 8930.0 39 9736.0 40 10718.0 41 11700.0 42 14494.0 43 17288.0 44 21255.5 45 25223.0 46 37974.0 47 50725.0 48 52054.0 49 53383.0 50 52396.5 51 51410.0 52 41856.5 53 32303.0 54 26135.5 55 19968.0 56 16804.5 57 13641.0 58 11963.5 59 10286.0 60 9036.5 61 7787.0 62 6827.5 63 5868.0 64 5186.5 65 4505.0 66 3752.0 67 2999.0 68 2569.5 69 2140.0 70 1831.0 71 1522.0 72 1278.0 73 1034.0 74 826.5 75 480.5 76 342.0 77 288.0 78 234.0 79 178.5 80 123.0 81 92.0 82 61.0 83 47.5 84 34.0 85 19.0 86 4.0 87 4.0 88 4.0 89 3.0 90 2.0 91 3.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 439093.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.073899352306896 #Duplication Level Percentage of deduplicated Percentage of total 1 73.95807227485025 31.117044891826882 2 10.710371099867725 9.012541513633824 3 4.512182749677616 5.695353686074541 4 2.4656575974311217 4.149593183662715 5 1.6716116414175277 3.516560997857279 6 1.2107839154585867 3.0565440357837983 7 0.9966717247044676 2.9353706082754125 8 0.7634597679086892 2.5697383547620616 9 0.6423035237849687 2.4321792432024743 >10 2.9269240649687567 18.83823760531676 >50 0.07978464259649325 2.3171532333688614 >100 0.04897126338681287 3.8872334840140286 >500 0.007703344802420001 2.4259615078901198 >1k 0.004952150230127144 5.432310982216019 >5k 0.0 0.0 >10k+ 5.502389144585716E-4 2.6141766721152053 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11292 2.5716647726108137 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCG 3971 0.9043642235244015 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTC 3915 0.8916106610672454 No Hit GCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 3235 0.736745974087494 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGC 3211 0.7312801616058557 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCC 2293 0.5222128341831913 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2170 0.49420054521479506 No Hit CCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 1943 0.4425030688259663 No Hit CTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGCT 1396 0.3179280926819603 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1331 0.30312485054418997 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGTCCTAAT 1000 0.2277421867349286 No Hit TCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 946 0.21544410865124244 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCT 934 0.2127112024104233 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 895 0.2038292571277611 No Hit GAACTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCT 820 0.18674859312264144 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 764 0.17399503066548544 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCG 741 0.16875696037058208 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 702 0.15987501508791988 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTC 665 0.15144855417872752 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 665 0.15144855417872752 No Hit ACTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 657 0.14962661668484808 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 589 0.13414014798687296 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGTCCTAATCGTA 575 0.13095175737258394 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGC 526 0.11979239022257243 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.277421867349286E-4 0.0 0.0 0.3393358582350436 0.0 2 2.277421867349286E-4 0.0 0.0 2.002992532333697 0.0 3 2.277421867349286E-4 0.0 0.0 2.6486416317272194 0.0 4 2.277421867349286E-4 0.0 0.0 3.727911854664046 0.0 5 2.277421867349286E-4 0.0 0.0 7.205079561732936 0.0 6 2.277421867349286E-4 0.0 0.0 8.703623150448767 0.0 7 2.277421867349286E-4 0.0 0.0 10.39916373069031 0.0 8 2.277421867349286E-4 0.0 0.0 12.766316019613157 0.0 9 2.277421867349286E-4 0.0 0.0 13.603040813677286 0.0 10 2.277421867349286E-4 0.0 0.0 16.864992154281666 0.0 11 4.554843734698572E-4 0.0 0.0 20.704269938259092 0.0 12 4.554843734698572E-4 0.0 0.0 24.21127187179026 0.0 13 4.554843734698572E-4 0.0 0.0 25.304434368117917 0.0 14 4.554843734698572E-4 0.0 0.0 25.787247803995964 0.0 15 4.554843734698572E-4 0.0 0.0 26.84055541764501 0.0 16 4.554843734698572E-4 0.0 0.0 28.585971536781503 0.0 17 4.554843734698572E-4 0.0 0.0 30.56391242857436 0.0 18 4.554843734698572E-4 0.0 0.0 32.66346764808366 0.0 19 4.554843734698572E-4 0.0 0.0 34.31550947065884 0.0 20 4.554843734698572E-4 0.0 0.0 35.73616523151132 0.0 21 4.554843734698572E-4 0.0 0.0 37.33696506207113 0.0 22 4.554843734698572E-4 0.0 0.0 38.88675064280232 0.0 23 4.554843734698572E-4 0.0 0.0 40.19148563060673 0.0 24 4.554843734698572E-4 0.0 0.0 41.07398660420458 0.0 25 4.554843734698572E-4 0.0 0.0 41.82439710949617 0.0 26 4.554843734698572E-4 0.0 0.0 42.474828794811124 0.0 27 4.554843734698572E-4 0.0 0.0 43.152361800347535 0.0 28 4.554843734698572E-4 0.0 0.0 43.71397403283587 0.0 29 4.554843734698572E-4 0.0 0.0 44.21477910146598 0.0 30 4.554843734698572E-4 0.0 0.0 44.7841345683033 0.0 31 4.554843734698572E-4 0.0 0.0 45.20614084032312 0.0 32 4.554843734698572E-4 0.0 0.0 45.58578706561025 0.0 33 4.554843734698572E-4 0.0 0.0 45.980919759595345 0.0 34 4.554843734698572E-4 0.0 0.0 46.37013115672534 0.0 35 4.554843734698572E-4 0.0 0.0 46.757292874174716 0.0 36 4.554843734698572E-4 0.0 0.0 47.10915455268018 0.0 37 4.554843734698572E-4 0.0 0.0 47.452134285902986 0.0 38 4.554843734698572E-4 0.0 0.0 47.84066245647278 0.0 39 4.554843734698572E-4 0.0 0.0 48.32711976733858 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGG 25 3.886853E-5 45.000004 2 CGAAAGG 25 3.886853E-5 45.000004 2 TCCGAGT 25 3.886853E-5 45.000004 12 TTGAGTA 25 3.886853E-5 45.000004 7 CGTTAGG 45 3.8380676E-10 45.000004 2 CTCGGCG 25 3.886853E-5 45.000004 16 GCGTAAG 25 3.886853E-5 45.000004 1 GGCTACG 45 3.8380676E-10 45.000004 1 GCGACAA 20 7.028518E-4 45.0 11 ATTAGCG 20 7.028518E-4 45.0 1 GGCACTA 20 7.028518E-4 45.0 8 TTACTAC 20 7.028518E-4 45.0 1 TCGATAG 20 7.028518E-4 45.0 1 CGTTATT 235 0.0 45.0 1 CTGCCTA 20 7.028518E-4 45.0 23 GCCCTAC 20 7.028518E-4 45.0 26 CGAATGC 35 1.209628E-7 45.0 45 GCCTACG 20 7.028518E-4 45.0 25 CGTAAGG 35 1.209628E-7 45.0 2 TACTACC 20 7.028518E-4 45.0 2 >>END_MODULE