##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935211.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5334869 Sequences flagged as poor quality 0 Sequence length 51 %GC 31 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13313972657998 33.0 31.0 34.0 30.0 34.0 2 32.30885294465525 34.0 31.0 34.0 30.0 34.0 3 32.15364388516382 33.0 31.0 34.0 30.0 34.0 4 35.87160003366531 37.0 35.0 37.0 35.0 37.0 5 33.365390977735345 37.0 35.0 37.0 30.0 37.0 6 34.40427290716979 37.0 35.0 37.0 28.0 37.0 7 35.662490869035395 37.0 35.0 37.0 32.0 37.0 8 35.611328413125044 37.0 35.0 37.0 33.0 37.0 9 37.74638758702416 39.0 38.0 39.0 35.0 39.0 10 37.39994102947983 39.0 37.0 39.0 34.0 39.0 11 37.2413020825816 39.0 37.0 39.0 34.0 39.0 12 37.464048133140665 39.0 37.0 39.0 35.0 39.0 13 37.45442202985678 39.0 37.0 39.0 35.0 39.0 14 38.71944222060561 40.0 38.0 41.0 35.0 41.0 15 38.778769450571325 40.0 38.0 41.0 34.0 41.0 16 38.75933073520643 40.0 38.0 41.0 34.0 41.0 17 38.60298350343748 40.0 38.0 41.0 34.0 41.0 18 38.038240114237105 39.0 38.0 40.0 34.0 41.0 19 37.33479378781372 37.0 37.0 40.0 34.0 41.0 20 36.495017778318456 36.0 35.0 40.0 33.0 41.0 21 36.43677492362043 36.0 35.0 40.0 33.0 41.0 22 36.37070038645747 35.0 35.0 40.0 33.0 41.0 23 36.16405876133041 35.0 35.0 40.0 33.0 41.0 24 35.83545781536529 35.0 35.0 40.0 32.0 41.0 25 35.687560837951224 35.0 35.0 40.0 31.0 41.0 26 35.84877773006235 35.0 35.0 40.0 32.0 41.0 27 35.75605642800226 35.0 35.0 40.0 32.0 41.0 28 35.68040208672415 35.0 35.0 40.0 32.0 41.0 29 35.610534391753575 35.0 35.0 40.0 31.0 41.0 30 35.1763068596436 35.0 35.0 40.0 30.0 41.0 31 34.67666572506279 35.0 35.0 40.0 25.0 41.0 32 33.71917511001676 35.0 33.0 40.0 20.0 41.0 33 32.62043379134521 35.0 33.0 40.0 15.0 41.0 34 31.49620637357731 35.0 30.0 40.0 8.0 41.0 35 30.707027857666233 35.0 24.0 40.0 7.0 41.0 36 30.238558060188545 35.0 22.0 40.0 7.0 41.0 37 30.02154448403513 35.0 21.0 40.0 7.0 41.0 38 29.85141734501822 35.0 21.0 40.0 7.0 41.0 39 29.612820108609977 35.0 20.0 40.0 7.0 41.0 40 29.446596720556773 35.0 20.0 40.0 7.0 41.0 41 29.231512338915913 35.0 18.0 40.0 7.0 41.0 42 29.13022644042431 35.0 18.0 40.0 7.0 41.0 43 29.01122782958682 35.0 18.0 40.0 7.0 41.0 44 28.915546567310276 35.0 18.0 40.0 7.0 41.0 45 28.881543483073344 35.0 18.0 40.0 7.0 41.0 46 28.773311959487664 35.0 18.0 40.0 7.0 41.0 47 28.638206298973788 35.0 18.0 39.0 7.0 41.0 48 28.57309710885122 35.0 18.0 39.0 7.0 41.0 49 28.489298987472793 35.0 18.0 39.0 7.0 41.0 50 28.391241846800735 35.0 17.0 39.0 7.0 41.0 51 27.75985483429865 34.0 15.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 4.0 8 41.0 9 59.0 10 73.0 11 102.0 12 164.0 13 229.0 14 428.0 15 685.0 16 1320.0 17 2584.0 18 5189.0 19 10332.0 20 18761.0 21 31584.0 22 47436.0 23 69673.0 24 112161.0 25 196954.0 26 293467.0 27 312598.0 28 266774.0 29 210675.0 30 175787.0 31 162695.0 32 167766.0 33 192761.0 34 269837.0 35 401673.0 36 488501.0 37 445977.0 38 660277.0 39 788059.0 40 242.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.43938042339934 11.83622315749459 13.345369867563758 47.37902655154231 2 59.44354022563628 17.664313781650495 13.950445643557508 8.941700349155715 3 17.611472746566037 17.705814332085758 55.81861522747794 8.86409769387027 4 15.14668870032235 15.22481620448412 59.33176615958142 10.296728935612103 5 15.884963623286719 22.97747142432176 51.29850423693628 9.839060715455243 6 14.94814586824906 22.180544639427886 54.565294855412574 8.306014636910485 7 45.949750593688435 3.9881579097818523 47.675678634283244 2.386412862246477 8 46.69213058464978 5.875252044614404 45.00041144402984 2.4322059267059792 9 42.897548187218845 5.425175388561556 45.59435292600437 6.082923498215233 10 22.649872002480286 19.080805920445282 49.999447034219585 8.269875042854848 11 17.124731647581225 16.555870444054015 55.28827418255256 11.031123725812199 12 14.043700042119124 15.333966026157345 57.39679830938679 13.225535622336743 13 15.252408259696724 15.56883589831353 58.43240012079022 10.746355721199526 14 12.285887432287465 19.16645001030016 56.9901716424527 11.557490914959674 15 11.71196518602425 17.973974618683233 58.012483530523426 12.301576664769089 16 13.795858904876576 18.361669236864113 55.51392171016758 12.328550148091734 17 13.74504228688652 19.394253167228662 55.740881359973415 11.119823185911407 18 13.35453597829675 18.393253892457338 55.77878294668529 12.473427182560622 19 13.025774391086268 19.196535097675312 54.827006998672324 12.9506835125661 20 14.488621932422333 19.94751886128788 55.492121737197294 10.071737469092493 21 13.628600814752904 20.443632261635667 55.906846072509 10.020920851102435 22 13.063301085743623 17.517149905649042 57.24841603420815 12.171132974399184 23 13.635873720610572 18.834295649996278 56.14934499797465 11.380485631418503 24 12.81291068253035 20.35393933759198 55.344058120265 11.489091859612673 25 12.702411249460857 21.906142400122665 54.21705762596982 11.174388724446654 26 12.729497200399859 19.906993030194368 55.29474107049302 12.068768698912757 27 14.271465709842172 19.368066957220506 54.572136635407546 11.78833069752978 28 12.100540800533247 20.636345522261184 54.924104040792756 12.339009636412815 29 14.092960858082925 19.017749076875177 55.4121010281602 11.477189036881692 30 14.26569237220258 20.550851389228114 54.08333363012288 11.10012260844643 31 14.13296184030011 19.70880634557287 53.34537736540484 12.812854448722172 32 15.648406736885198 21.72994313449871 51.17100344919435 11.450646679421745 33 16.40746942427265 21.795418031820464 49.02212219269114 12.774990351215749 34 16.60363169179974 23.09226337141549 46.90072052378419 13.403384413000582 35 16.71028848131041 25.423210954195874 44.46868329850274 13.397817265990975 36 16.869467647659203 26.999369619010327 42.92251599804981 13.20864673528066 37 16.772445583949672 26.372212701005402 43.20717153504613 13.648170179998797 38 16.936985706678083 26.084558027572935 41.91915490333502 15.05930136241396 39 17.730088592615864 26.480031655885085 41.11519889241892 14.674680859080139 40 17.824973771614637 26.0149780622542 41.56267004869286 14.597378117438309 41 16.691000285105407 27.161191774343475 40.625477401600676 15.52233053895044 42 16.625731578413642 26.800020769019824 41.43503804873184 15.139209603834697 43 17.358701778806566 26.230878396451722 40.71378322504264 15.696636599699074 44 17.297032035838182 25.563683007024164 40.58778200551878 16.55150295161887 45 16.68382110226137 25.39128889575358 40.477170104832936 17.447719897152115 46 17.396265962669375 25.939737226912225 40.467310443799086 16.19668636661931 47 15.986446902445028 26.185422734841286 42.142196931171135 15.685933431542557 48 16.206208624804095 25.789742915899154 41.158217755674976 16.845830703621775 49 16.30553627464892 25.434701395666888 41.94374782211147 16.316014507572728 50 15.958086318520662 25.276984308330718 41.754108676333004 17.01082069681561 51 16.00588505547184 25.033998023194197 40.737851294942764 18.222265626391202 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 13338.0 1 14763.0 2 16188.0 3 394511.0 4 772834.0 5 481748.5 6 190663.0 7 182682.5 8 174702.0 9 176854.0 10 179006.0 11 177579.0 12 176152.0 13 171266.0 14 166380.0 15 158748.5 16 151117.0 17 140533.5 18 129950.0 19 120194.5 20 110439.0 21 102330.0 22 94221.0 23 89026.0 24 83831.0 25 81758.0 26 78501.5 27 77318.0 28 80209.0 29 83100.0 30 87516.5 31 91933.0 32 97161.5 33 102390.0 34 112226.0 35 122062.0 36 125763.5 37 129465.0 38 134510.5 39 139556.0 40 148544.5 41 157533.0 42 163714.5 43 169896.0 44 185809.0 45 201722.0 46 265838.5 47 329955.0 48 281101.5 49 232248.0 50 226738.5 51 221229.0 52 202048.0 53 182867.0 54 172410.0 55 161953.0 56 147959.5 57 133966.0 58 125511.0 59 117056.0 60 109181.5 61 101307.0 62 88314.5 63 75322.0 64 65382.0 65 55442.0 66 46683.0 67 37924.0 68 31458.5 69 24993.0 70 22076.5 71 19160.0 72 15002.5 73 10845.0 74 9237.5 75 5831.5 76 4033.0 77 3519.0 78 3005.0 79 2133.5 80 1262.0 81 933.0 82 604.0 83 454.0 84 304.0 85 221.5 86 139.0 87 112.5 88 86.0 89 53.5 90 21.0 91 18.0 92 15.0 93 15.0 94 15.0 95 9.0 96 3.0 97 2.0 98 1.0 99 2.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5334869.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.479110392650476 #Duplication Level Percentage of deduplicated Percentage of total 1 80.53982524544367 22.937025741697674 2 7.196663936255843 4.0990917339887325 3 2.79771735702861 2.390295043747563 4 1.5704217844797914 1.7889686145289254 5 1.0583846912723962 1.5070927230318931 6 0.8124282122802261 1.388233964617934 7 0.6180099009678993 1.2320260535391054 8 0.506803516329504 1.1546650631145106 9 0.43473062925668876 1.1142667423500883 >10 3.5989040732973563 21.6287503664199 >50 0.664423374832067 13.124071283344707 >100 0.1871699170965318 8.053244220580645 >500 0.008559765023678183 1.7005513601715163 >1k 0.00438259967688822 2.2412431793003793 >5k 8.902155593679196E-4 1.6578030606556275 >10k+ 6.847811995137843E-4 13.982670848910761 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 549563 10.301340107882687 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTC 40072 0.7511337204343724 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37052 0.6945250202019956 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCG 17981 0.3370467016153536 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGC 13931 0.2611310605752456 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCT 13744 0.2576258198654925 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCC 12193 0.22855294103754 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGT 11010 0.20637807601273805 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10935 0.20497223080829163 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCG 10507 0.19694954084158392 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTT 8891 0.16665826283644453 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTT 8453 0.15844812684247728 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 7635 0.14311504181264806 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCT 7289 0.13662940926946848 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 6886 0.1290753343709096 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTC 6873 0.12883165453547218 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 6296 0.11801601876259755 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 5838 0.10943099071411126 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTC 5633 0.10558834715529096 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 5500 0.10309531499273927 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAGGAAT 5338 0.10005868935113495 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.497841090381038E-5 0.0 0.0 0.03235318430499418 0.0 2 7.497841090381038E-5 0.0 0.0 0.22686592679220427 0.0 3 7.497841090381038E-5 0.0 0.0 0.3422014673649906 0.0 4 7.497841090381038E-5 0.0 0.0 0.7187243023212004 0.0 5 7.497841090381038E-5 0.0 0.0 1.7896409452603241 0.0 6 7.497841090381038E-5 0.0 0.0 2.3833574920021467 0.0 7 9.372301362976298E-5 0.0 0.0 2.82812942548355 0.0 8 1.1246761635571558E-4 0.0 0.0 3.287222235447581 0.0 9 1.1246761635571558E-4 0.0 0.0 3.6727612243149736 0.0 10 1.1246761635571558E-4 0.0 0.0 4.487682827825763 0.0 11 1.1246761635571558E-4 0.0 0.0 4.984264843241699 0.0 12 1.3121221908166816E-4 0.0 0.0 5.588909493372752 0.0 13 1.4995682180762076E-4 0.0 0.0 5.775455779701432 0.0 14 1.4995682180762076E-4 0.0 0.0 5.903162758073347 0.0 15 1.6870142453357336E-4 0.0 0.0 6.037149178358456 0.0 16 1.6870142453357336E-4 0.0 0.0 6.179008331788466 0.0 17 1.6870142453357336E-4 0.0 0.0 6.321486057108431 0.0 18 1.6870142453357336E-4 0.0 0.0 6.453785463148205 0.0 19 1.6870142453357336E-4 0.0 0.0 6.68509386078646 0.0 20 1.8744602725952596E-4 0.0 0.0 6.805284253465268 0.0 21 2.2493523271143115E-4 0.0 0.0 6.917152042533753 0.0 22 2.2493523271143115E-4 0.0 0.0 7.054718681939519 0.0 23 2.2493523271143115E-4 0.0 0.0 7.168948290951474 0.0 24 2.2493523271143115E-4 0.0 0.0 7.268482131426283 0.0 25 2.2493523271143115E-4 0.0 0.0 7.3538825414457225 0.0 26 2.4367983543738375E-4 0.0 0.0 7.441644771408632 0.0 27 2.624244381633363E-4 0.0 0.0 7.545658571934943 0.0 28 2.624244381633363E-4 0.0 0.0 7.640225092687374 0.0 29 2.624244381633363E-4 0.0 0.0 7.740227548230331 0.0 30 2.624244381633363E-4 0.0 0.0 7.863004696085321 0.0 31 2.624244381633363E-4 0.0 0.0 7.968161917377915 0.0 32 2.624244381633363E-4 0.0 0.0 8.079729792802786 0.0 33 2.624244381633363E-4 0.0 0.0 8.185880478039854 0.0 34 2.624244381633363E-4 0.0 0.0 8.298048180751955 0.0 35 2.624244381633363E-4 0.0 0.0 8.41070324313493 0.0 36 2.624244381633363E-4 0.0 0.0 8.527069736857644 0.0 37 2.811690408892889E-4 0.0 0.0 8.645160734031144 0.0 38 2.999136436152415E-4 0.0 0.0 8.777216460235481 0.0 39 2.999136436152415E-4 0.0 0.0 8.959676423169903 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 202995 0.0 44.52782 1 CGTTATT 14910 0.0 44.38129 1 CCGATGA 6095 0.0 42.23134 18 CGATGAA 6300 0.0 41.964287 19 GTTATTT 16160 0.0 41.310337 2 ACCACCG 7330 0.0 41.070942 14 GATGAAT 6905 0.0 40.177406 20 GTTTTTT 226625 0.0 39.931606 2 CCACCGA 7315 0.0 39.832535 15 CGTAAGG 445 0.0 39.4382 2 CGACCAC 9150 0.0 39.41803 12 TAATACG 620 0.0 38.830643 4 TGAATGA 6915 0.0 38.752712 22 CACCGAT 6850 0.0 38.627735 16 ATCGAAT 780 0.0 38.365383 43 ATGAATG 7165 0.0 38.185623 21 GCGACCA 9405 0.0 38.08612 11 ACCGATG 6755 0.0 38.03849 17 GACCACC 9270 0.0 37.694176 13 CCAATCG 395 0.0 37.594936 40 >>END_MODULE