##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935208.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 971098 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.550888787743357 31.0 31.0 34.0 30.0 34.0 2 31.67905710855135 31.0 31.0 34.0 30.0 34.0 3 31.665045134476642 31.0 31.0 34.0 30.0 34.0 4 35.52282467886866 37.0 35.0 37.0 33.0 37.0 5 32.99179897394496 35.0 35.0 37.0 28.0 37.0 6 33.9546513328212 36.0 35.0 37.0 28.0 37.0 7 35.260012892622576 37.0 35.0 37.0 32.0 37.0 8 34.99912161285473 37.0 35.0 37.0 32.0 37.0 9 37.01421380746331 39.0 37.0 39.0 33.0 39.0 10 36.62146662849681 39.0 35.0 39.0 32.0 39.0 11 36.473771957104226 39.0 35.0 39.0 32.0 39.0 12 36.838812354674815 39.0 37.0 39.0 32.0 39.0 13 36.74452732885867 39.0 37.0 39.0 32.0 39.0 14 37.75256359296384 40.0 37.0 41.0 32.0 41.0 15 37.78220220822203 40.0 37.0 41.0 32.0 41.0 16 37.920202698388835 40.0 37.0 41.0 33.0 41.0 17 37.609302047785086 39.0 36.0 41.0 32.0 41.0 18 37.509027925090976 39.0 37.0 40.0 33.0 41.0 19 37.21344086796595 38.0 36.0 40.0 32.0 41.0 20 36.36009239026339 38.0 35.0 40.0 30.0 41.0 21 36.63594199555555 38.0 35.0 40.0 31.0 41.0 22 36.66443242597555 38.0 35.0 40.0 31.0 41.0 23 36.0716446743789 38.0 35.0 40.0 30.0 41.0 24 35.9140478097988 38.0 35.0 40.0 30.0 41.0 25 35.89986386543892 37.0 35.0 40.0 30.0 41.0 26 36.0238915124941 38.0 35.0 40.0 30.0 41.0 27 35.765088590440925 38.0 35.0 40.0 30.0 41.0 28 35.895932233410015 38.0 35.0 40.0 30.0 41.0 29 35.91118610068191 38.0 35.0 40.0 30.0 41.0 30 35.56054177848168 38.0 35.0 40.0 29.0 41.0 31 35.33762915792227 38.0 35.0 40.0 27.0 41.0 32 34.5485512275795 38.0 34.0 40.0 22.0 41.0 33 34.1955549285448 38.0 34.0 40.0 19.0 41.0 34 33.66717880172753 38.0 33.0 40.0 15.0 41.0 35 33.30689075664866 38.0 33.0 40.0 12.0 41.0 36 33.07762450339719 38.0 33.0 40.0 10.0 41.0 37 32.87570667430064 38.0 33.0 40.0 10.0 41.0 38 32.95672321434088 38.0 33.0 40.0 10.0 41.0 39 32.74169033403426 38.0 32.0 40.0 10.0 41.0 40 32.82773108378351 37.0 32.0 40.0 10.0 41.0 41 32.438027881840966 37.0 31.0 40.0 10.0 41.0 42 32.54338799997529 37.0 31.0 40.0 9.0 41.0 43 32.47305730214664 37.0 31.0 40.0 10.0 41.0 44 32.44707022360256 37.0 31.0 40.0 10.0 41.0 45 32.542228487753036 37.0 31.0 40.0 10.0 41.0 46 32.22297749557717 37.0 31.0 40.0 9.0 41.0 47 31.885993998545977 37.0 31.0 40.0 8.0 41.0 48 31.957358577610087 37.0 30.0 40.0 8.0 41.0 49 32.00916797274837 37.0 31.0 40.0 8.0 41.0 50 31.81615655680477 37.0 30.0 40.0 8.0 41.0 51 30.904359807146136 35.0 27.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 10.0 10 12.0 11 16.0 12 13.0 13 32.0 14 61.0 15 82.0 16 163.0 17 351.0 18 838.0 19 1963.0 20 4149.0 21 8229.0 22 13108.0 23 16224.0 24 18891.0 25 24076.0 26 28591.0 27 28148.0 28 24575.0 29 22115.0 30 22806.0 31 26283.0 32 32071.0 33 40356.0 34 54418.0 35 77720.0 36 100858.0 37 120666.0 38 170878.0 39 133364.0 40 27.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.004409441683535 17.146879099740705 18.574438419191473 23.274273039384287 2 36.62977372005709 34.70442735954558 17.6566113821674 11.009187538229922 3 19.503283911613455 34.82624822623463 35.80400742252584 9.866460439626072 4 17.601828033833865 19.105486778883286 51.16795627217851 12.124728915104347 5 26.67495968481039 26.33359351991251 33.69907053665027 13.292376258626835 6 16.05811153972102 38.39591884650159 35.85940862817141 9.686560985605984 7 51.93821838784552 5.88498792088955 37.820281784124774 4.356511907140165 8 49.50190403028324 17.115883257920416 26.943109758232435 6.4391029535639035 9 46.15898704353217 7.237992458021744 27.061635385923978 19.541385112522114 10 31.571787811322853 21.17294032116223 34.47417253459486 12.781099332920057 11 22.470234723992842 20.03814239139613 40.236927683920676 17.254695200690353 12 15.088281512267557 17.221948763152636 44.09009183419181 23.599677890387994 13 20.351396048596538 19.511522009107214 48.56935139398907 11.567730548307175 14 14.234711635694852 30.10828979155554 39.38871257071892 16.268286002030692 15 10.365895100185563 22.59813118758354 47.691685082247105 19.34428862998379 16 10.896840483658703 25.043507452388948 37.869401440431346 26.190250623521006 17 11.290003686548628 29.342764581947446 41.39221788120251 17.975013850301412 18 10.668954111737436 24.462206697985167 42.561924749098445 22.306914441178954 19 10.679354709823313 26.087892262160977 39.7193692088749 23.513383819140806 20 15.065626744159704 27.165950295438773 44.39448953658642 13.373933423815105 21 12.865024951137785 33.1332162150473 40.42166702021835 13.580091813596567 22 10.154278970814481 23.587217767928674 44.263812715091575 21.99469054616527 23 14.271680098198122 27.739836762098165 40.0739163297628 17.91456680994091 24 14.409874183656028 27.119508020817673 37.44472751462777 21.02589028089853 25 10.43416833316514 35.520307940084315 35.13991378830973 18.90560993844082 26 12.527674858768115 24.446039431653656 43.683438746655845 19.342846962922383 27 18.72426881735932 25.737876094894645 38.582305802298016 16.95554928544802 28 10.652374940531233 27.868762987875577 41.910703142216335 19.56815892937685 29 17.727767949269797 22.009004240560685 41.3351690560582 18.928058754111326 30 13.684818627986054 30.48322620374051 40.05270322871636 15.77925193955708 31 14.770702853882925 26.673929922623667 36.07740928310016 22.477957940393246 32 20.25789364204231 30.88627512362295 32.26533264407917 16.590498590255567 33 16.399580680837566 23.954225011275895 32.668999421273654 26.97719488661289 34 18.62829498155696 28.01797552873139 31.876494442373478 21.477235047338166 35 21.271488562431394 24.483007894156923 32.53904343330951 21.706460110102174 36 18.321322873695546 26.4294643794962 33.5017681016746 21.747444645133655 37 13.906423450568326 28.22784106238505 39.8332609067262 18.03247458032042 38 15.533035800712183 26.40248461020412 31.670336052592013 26.394143536491683 39 17.372911899725878 32.611847619910655 29.302294928009324 20.71294555235414 40 19.315867193630304 24.790082978237006 31.39538954873761 24.498660279395075 41 18.455603862843915 28.341217879142988 28.071832091096883 25.131346166916213 42 20.934653351155085 22.325656112977267 35.333715031850545 21.405975504017103 43 19.994377498460505 22.481871036702785 31.784330726661985 25.73942073817473 44 17.30566842893302 22.992942009972218 35.38633587959197 24.315053681502793 45 17.913125142879505 21.47589635649543 33.399100811658556 27.211877688966513 46 23.947634533280883 26.323810779138668 30.915005488632456 18.813549198947996 47 13.890977017767517 24.844042516821165 40.41919559097022 20.845784874441097 48 16.93361535087087 26.724182317335632 32.69175716560018 23.650445166193318 49 18.61573188287897 20.44860559902296 39.85004603036975 21.085616487728323 50 18.746923585467172 19.889856636508366 34.42567073560032 26.93754904242414 51 16.896337959711584 20.196004934620397 31.68248724639532 31.2251698592727 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5123.0 1 6353.0 2 7583.0 3 31093.5 4 54604.0 5 35037.0 6 15470.0 7 15453.0 8 15436.0 9 16518.0 10 17600.0 11 18019.5 12 18439.0 13 18682.5 14 18926.0 15 17624.0 16 16322.0 17 15844.0 18 15366.0 19 13396.0 20 11426.0 21 10812.5 22 10199.0 23 9805.0 24 9411.0 25 9216.5 26 9573.5 27 10125.0 28 10686.5 29 11248.0 30 12019.0 31 12790.0 32 14041.5 33 15293.0 34 16547.5 35 17802.0 36 18830.5 37 19859.0 38 21405.0 39 22951.0 40 26123.0 41 29295.0 42 35582.5 43 41870.0 44 50880.5 45 59891.0 46 111889.0 47 163887.0 48 135448.5 49 107010.0 50 98924.5 51 90839.0 52 70802.0 53 50765.0 54 42188.5 55 33612.0 56 28465.5 57 23319.0 58 19371.0 59 15423.0 60 12040.0 61 8657.0 62 6762.5 63 4868.0 64 3793.5 65 2719.0 66 2193.0 67 1667.0 68 1278.0 69 889.0 70 687.5 71 486.0 72 467.0 73 448.0 74 325.0 75 154.0 76 106.0 77 93.0 78 80.0 79 52.0 80 24.0 81 28.0 82 32.0 83 20.0 84 8.0 85 5.5 86 3.0 87 2.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 971098.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.61499924792678 #Duplication Level Percentage of deduplicated Percentage of total 1 75.82859245184962 28.522924480476703 2 10.166784338411802 7.6484717048638755 3 4.156657361544145 4.690579905851171 4 2.3485626455587223 3.533647285856011 5 1.4822564393656776 2.78775374259873 6 1.0405941171549555 2.348516816050841 7 0.7879230343494673 2.074640704113558 8 0.6184504391809931 1.8610410243738433 9 0.5030320809150387 1.7029396210772003 >10 2.8911054550061337 18.173555932828865 >50 0.10670058059561412 2.759867782477138 >100 0.05660494372903686 3.849158568754817 >500 0.004245370779619059 1.0944061867043493 >1k 0.006226543810107953 4.954104270261371 >5k 0.0011320988745650822 3.094678350321861 >10k+ 0.0011320988745650822 10.903713623389704 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36806 3.7901427044438356 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTC 22311 2.2975024147923278 Illumina PCR Primer Index 11 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGC 21996 2.265064905910629 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCG 21308 2.1942172674642517 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTTACAGCT 8321 0.8568651155702103 No Hit GCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGC 7936 0.8172192713814672 Illumina PCR Primer Index 11 (95% over 24bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCC 6686 0.6884989980413923 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCT 6126 0.6308323155850387 No Hit GAACTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCT 4965 0.5112769257067773 Illumina PCR Primer Index 11 (95% over 22bp) GAATGATCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTC 4554 0.46895369983256063 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4104 0.42261440143013373 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTACAGCTCGTA 3704 0.38142391396130976 No Hit CCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGC 3505 0.36093164644556985 Illumina PCR Primer Index 11 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGCT 2675 0.2754613849477601 Illumina PCR Primer Index 11 (96% over 25bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCG 2434 0.2506441162477937 No Hit GTGAAGGGAATGTAAAGTTTTTAAAAATTATTTTTACAAATTTCTTAATTT 1884 0.1940071959781608 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTT 1793 0.18463636007900336 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGC 1695 0.1745446906491415 No Hit TCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGC 1533 0.1578625432242678 Illumina PCR Primer Index 11 (95% over 24bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTTACAGC 1410 0.14519646832760444 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGT 1391 0.14323992017283527 No Hit CGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTG 1368 0.14087146714337792 Illumina PCR Primer Index 11 (95% over 23bp) GAATAATACCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCG 1335 0.13747325192719995 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1305 0.13438396536703814 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTC 1283 0.13211848855625283 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1270 0.13077979771351605 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTTACAGCTCGT 1117 0.11502443625669087 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1074 0.11059645885379231 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATG 1074 0.11059645885379231 No Hit GAATATGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTC 1062 0.1093607442297276 Illumina PCR Primer Index 11 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0297621867205987E-4 0.0 0.0 0.2980131768369413 0.0 2 1.0297621867205987E-4 0.0 0.0 1.8427594331365114 0.0 3 1.0297621867205987E-4 0.0 0.0 2.4015083956511085 0.0 4 1.0297621867205987E-4 0.0 0.0 3.642989687961462 0.0 5 1.0297621867205987E-4 0.0 0.0 7.85317238836863 0.0 6 1.0297621867205987E-4 0.0 0.0 9.234701338072986 0.0 7 1.0297621867205987E-4 0.0 0.0 11.10207208747212 0.0 8 1.0297621867205987E-4 0.0 0.0 13.310397096894443 0.0 9 1.0297621867205987E-4 0.0 0.0 14.052958609738667 0.0 10 1.0297621867205987E-4 0.0 0.0 18.24038356581931 0.0 11 1.0297621867205987E-4 0.0 0.0 21.379407639599712 0.0 12 1.0297621867205987E-4 0.0 0.0 25.908713641671593 0.0 13 1.0297621867205987E-4 0.0 0.0 26.815625199516425 0.0 14 1.0297621867205987E-4 0.0 0.0 27.208685426187674 0.0 15 1.0297621867205987E-4 0.0 0.0 28.144533301479356 0.0 16 1.0297621867205987E-4 0.0 0.0 29.421232460575556 0.0 17 1.0297621867205987E-4 0.0 0.0 30.944559663391335 0.0 18 1.0297621867205987E-4 0.0 0.0 32.45244043340631 0.0 19 1.0297621867205987E-4 0.0 0.0 34.560466605842045 0.0 20 1.0297621867205987E-4 0.0 0.0 35.5785924798527 0.0 21 1.0297621867205987E-4 0.0 0.0 36.61144395313347 0.0 22 1.0297621867205987E-4 0.0 0.0 37.80112820745177 0.0 23 1.0297621867205987E-4 0.0 0.0 38.82687432164416 0.0 24 1.0297621867205987E-4 0.0 0.0 39.539160826198795 0.0 25 1.0297621867205987E-4 0.0 0.0 40.10058717039887 0.0 26 1.0297621867205987E-4 0.0 0.0 40.61248195341768 0.0 27 1.0297621867205987E-4 0.0 0.0 41.07463922281788 0.0 28 1.0297621867205987E-4 0.0 0.0 41.50827207964593 0.0 29 1.0297621867205987E-4 0.0 0.0 41.94118410294327 0.0 30 1.0297621867205987E-4 0.0 0.0 42.42887947457414 0.0 31 1.0297621867205987E-4 0.0 0.0 42.83615041942214 0.0 32 1.0297621867205987E-4 0.0 0.0 43.18668146778183 0.0 33 1.0297621867205987E-4 0.0 0.0 43.517750010812506 0.0 34 1.0297621867205987E-4 0.0 0.0 43.85201081662201 0.0 35 1.0297621867205987E-4 0.0 0.0 44.16989840366266 0.0 36 1.0297621867205987E-4 0.0 0.0 44.45421574341621 0.0 37 1.0297621867205987E-4 0.0 0.0 44.75665689765606 0.0 38 1.0297621867205987E-4 0.0 0.0 45.04952126355939 0.0 39 1.0297621867205987E-4 0.0 0.0 45.35494872814073 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCCGA 35 1.2116652E-7 45.000004 33 ATCCGGC 150 0.0 45.000004 6 GGCGCCG 35 1.2116652E-7 45.000004 32 TCGAATA 35 1.2116652E-7 45.000004 44 TGATCGT 25 3.8903567E-5 45.0 28 TATTTCG 20 7.032745E-4 45.0 15 ATTTACG 25 3.8903567E-5 45.0 1 AATCCGG 20 7.032745E-4 45.0 2 GTCGACC 40 6.8139343E-9 45.0 10 GCGCGAT 40 6.8139343E-9 45.0 42 GCGCGAC 40 6.8139343E-9 45.0 9 ATTACCG 20 7.032745E-4 45.0 36 TCGATCA 25 3.8903567E-5 45.0 17 AGTATCG 20 7.032745E-4 45.0 1 CGCTCGA 365 0.0 45.0 41 CTACGAC 20 7.032745E-4 45.0 12 GCTTACC 25 3.8903567E-5 45.0 21 GGACGTA 20 7.032745E-4 45.0 8 ACGTCGA 40 6.8139343E-9 45.0 8 CTCGATC 25 3.8903567E-5 45.0 16 >>END_MODULE