##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935201.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 563169 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.734935694258738 31.0 31.0 34.0 30.0 34.0 2 31.838345150390026 33.0 31.0 34.0 30.0 34.0 3 31.82566512006165 33.0 31.0 34.0 30.0 34.0 4 35.63344750865193 37.0 35.0 37.0 33.0 37.0 5 33.120731077172216 37.0 35.0 37.0 28.0 37.0 6 34.11958399698847 37.0 35.0 37.0 28.0 37.0 7 35.41458425446003 37.0 35.0 37.0 32.0 37.0 8 35.2749352325856 37.0 35.0 37.0 33.0 37.0 9 37.351372323405585 39.0 37.0 39.0 34.0 39.0 10 36.90061065150958 39.0 37.0 39.0 33.0 39.0 11 36.86672384310926 39.0 37.0 39.0 33.0 39.0 12 37.170371593606895 39.0 37.0 39.0 34.0 39.0 13 37.10475896222981 39.0 37.0 39.0 33.0 39.0 14 38.105305867332895 40.0 37.0 41.0 33.0 41.0 15 38.18943869424631 40.0 37.0 41.0 33.0 41.0 16 38.23395463883843 40.0 38.0 41.0 33.0 41.0 17 38.089678231578795 40.0 37.0 41.0 33.0 41.0 18 37.95492116931152 39.0 37.0 40.0 33.0 41.0 19 37.74578501302451 39.0 37.0 41.0 33.0 41.0 20 37.40167516322809 39.0 35.0 40.0 33.0 41.0 21 37.41385623143319 39.0 35.0 40.0 33.0 41.0 22 37.402298421965696 39.0 35.0 40.0 33.0 41.0 23 37.05862005898762 39.0 35.0 40.0 32.0 41.0 24 36.82889860770035 39.0 35.0 40.0 32.0 41.0 25 36.638682171781475 38.0 35.0 40.0 31.0 41.0 26 36.88921265197481 39.0 35.0 40.0 32.0 41.0 27 36.812795093479934 39.0 35.0 40.0 32.0 41.0 28 36.88289305696869 39.0 35.0 40.0 32.0 41.0 29 36.903755355852326 39.0 35.0 40.0 32.0 41.0 30 36.622504079592446 39.0 35.0 40.0 31.0 41.0 31 36.422136161614006 39.0 35.0 40.0 31.0 41.0 32 36.061370565496325 39.0 35.0 40.0 30.0 41.0 33 35.88320379850453 39.0 35.0 40.0 28.0 41.0 34 35.49746523690047 39.0 35.0 40.0 25.0 41.0 35 35.284616163176594 39.0 35.0 40.0 24.0 41.0 36 35.16647400691444 39.0 35.0 40.0 23.0 41.0 37 35.10482466186882 39.0 35.0 40.0 22.0 41.0 38 35.11390009038139 39.0 35.0 40.0 22.0 41.0 39 34.891149903492554 39.0 35.0 40.0 21.0 41.0 40 34.66690105456799 38.0 35.0 40.0 20.0 41.0 41 34.48064080231689 38.0 34.0 40.0 19.0 41.0 42 34.65931008276379 38.0 35.0 40.0 20.0 41.0 43 34.66846719190865 39.0 35.0 40.0 18.0 41.0 44 34.65177415660308 39.0 35.0 40.0 18.0 41.0 45 34.61928834861294 38.0 35.0 40.0 20.0 41.0 46 34.41509209491289 38.0 34.0 40.0 20.0 41.0 47 34.27617287173122 38.0 34.0 40.0 18.0 41.0 48 34.264437495671814 38.0 34.0 40.0 18.0 41.0 49 34.30206385649778 38.0 34.0 40.0 18.0 41.0 50 34.1756684050436 38.0 34.0 40.0 18.0 41.0 51 33.27901216153588 37.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 11.0 11 14.0 12 18.0 13 19.0 14 31.0 15 39.0 16 71.0 17 137.0 18 268.0 19 538.0 20 1031.0 21 1777.0 22 2917.0 23 4267.0 24 5711.0 25 7773.0 26 10238.0 27 11663.0 28 11447.0 29 11069.0 30 11890.0 31 13129.0 32 16072.0 33 20764.0 34 29814.0 35 45452.0 36 59177.0 37 76722.0 38 116770.0 39 104300.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.11841028181594 21.798607522786234 22.319765470045404 20.763216725352425 2 36.03554172903693 28.234508646605192 23.732485275290365 11.997464349067508 3 24.59936537700051 27.57023202626565 36.483187107244895 11.347215489488946 4 22.502126359938135 23.303661955824985 40.36532550619796 13.828886178038918 5 21.899465346991757 30.825382789180512 32.70687839707086 14.568273466756871 6 19.768311110874357 35.2965095735028 33.33795006472302 11.597229250899819 7 62.0889999271977 6.999675053136803 26.408591381983026 4.502733637682472 8 60.07699287425267 11.108921123144206 22.96379949890708 5.850286503696048 9 53.94526332237748 10.450681766929643 24.678915210176697 10.925139700516185 10 21.882951653944023 37.29129266703246 29.435036374516354 11.390719304507172 11 21.49514621721011 23.667140769467068 37.67394867260094 17.16376434072188 12 20.330842074048817 20.260525703652014 40.35840040911343 19.05023181318574 13 21.03098714595441 21.235543859836035 43.06682363553392 14.666645358675638 14 14.726662866741599 27.342769222027492 39.667133666803394 18.26343424442752 15 12.460913153955563 26.265472708902653 43.613551172028295 17.66006296511349 16 14.011602201115473 26.620428326133005 38.6399109325975 20.72805854015402 17 13.83208237669332 26.96721588013545 39.516557196862756 19.68414454630848 18 12.462333686690851 26.46736592390561 41.91388375425494 19.156416635148595 19 13.597516908778715 26.451740063817432 40.18420758244861 19.766535444955245 20 14.940985743178336 28.16650064190323 42.072983420607315 14.81953019431112 21 15.534235726753426 28.080558411418245 40.67002977791746 15.715176083910867 22 12.970351706148598 25.09513130161639 40.079088160037216 21.855428832197795 23 13.786270195980247 26.272752939171014 40.17674978558834 19.7642270792604 24 15.411359645150924 25.12354195632217 38.424167523425474 21.040930875101434 25 12.71341284765319 30.753645886048414 36.24347220816487 20.289469058133527 26 11.9207555813619 29.289964468924957 39.11756506483844 19.6717148848747 27 15.385967622507632 27.03451361846977 39.18273200406983 18.396786754952778 28 11.032745055214331 27.46475747067044 39.66961959909015 21.83287787502508 29 16.009581493299525 25.880508337639323 37.784927792545396 20.324982376515752 30 15.976731673795966 28.612547920783992 37.824880275725405 17.58584012969464 31 15.417574475867813 29.91499887245214 32.54014336726631 22.12728328441374 32 17.547130612658012 31.74020587070666 31.707533617795015 19.005129898840313 33 18.36606773455215 26.425282641622676 32.08805882426057 23.120590799564606 34 15.911742301156492 30.43775491903851 31.275158966491407 22.375343813313588 35 16.208633642831902 30.31843016927423 31.88723100880908 21.585705179084787 36 15.011657246758967 30.80940179590851 31.9577249457978 22.221216011534725 37 16.31979032936827 28.511157396802734 34.66508277266682 20.50396950116217 38 19.419037624585158 27.547858635684847 29.035333976124395 23.997769763605596 39 23.097152009432335 26.7511173377796 29.90079354509925 20.25093710768881 40 19.625014871202072 29.979633111907795 31.861128719798142 18.53422329709199 41 15.526600363301245 32.85638946746003 28.902336598782956 22.71467357045576 42 15.691027027410955 29.574603715758503 32.67615937667024 22.058209880160305 43 19.48367186404081 24.965507689521264 31.56246171220362 23.988358734234303 44 19.50870875350028 25.036179193101894 31.55020961736175 23.904902436036075 45 20.547650882772313 23.978592571679194 30.397269736082777 25.07648680946572 46 21.195946509839853 28.23237784750226 30.978090058224083 19.593585584433804 47 15.886882978288932 27.705360202710022 36.762854489504925 19.64490232949612 48 17.139792850813876 26.63197015460723 33.02241423089694 23.20582276368195 49 18.842478900649716 23.3677634955049 36.058270252801556 21.731487351043825 50 19.081483533362096 22.80558766551426 33.349491893197246 24.763436907926394 51 17.854853516440002 22.59375072136428 30.640358400409113 28.911037361786608 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4569.0 1 6812.0 2 9055.0 3 18935.5 4 28816.0 5 18587.0 6 8358.0 7 7881.5 8 7405.0 9 7601.0 10 7797.0 11 7605.0 12 7413.0 13 7147.5 14 6882.0 15 6746.0 16 6610.0 17 6014.5 18 5419.0 19 5539.5 20 5660.0 21 6367.0 22 7074.0 23 6756.0 24 6438.0 25 7510.0 26 9148.0 27 9714.0 28 9912.5 29 10111.0 30 10046.5 31 9982.0 32 10660.0 33 11338.0 34 11804.5 35 12271.0 36 13178.5 37 14086.0 38 14966.0 39 15846.0 40 18100.5 41 20355.0 42 23906.5 43 27458.0 44 31165.0 45 34872.0 46 50469.0 47 66066.0 48 64542.0 49 63018.0 50 59156.5 51 55295.0 52 43012.5 53 30730.0 54 24121.5 55 17513.0 56 14642.0 57 11771.0 58 10508.0 59 9245.0 60 8871.5 61 8498.0 62 7316.0 63 6134.0 64 4935.5 65 3737.0 66 2813.5 67 1890.0 68 1639.0 69 1388.0 70 1071.0 71 754.0 72 628.0 73 502.0 74 367.0 75 180.0 76 128.0 77 111.0 78 94.0 79 62.0 80 30.0 81 22.0 82 14.0 83 11.0 84 8.0 85 7.5 86 7.0 87 4.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 563169.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.842708278169425 #Duplication Level Percentage of deduplicated Percentage of total 1 73.47951309041142 30.01102317573605 2 10.706928699411597 8.745999308504556 3 4.5578159667458085 5.584606437461455 4 2.5700275319697066 4.198675390204098 5 1.7855324993888917 3.6462991496865627 6 1.328860370429633 3.256455387112659 7 1.0266776070330506 2.9352605799845963 8 0.8091724422668897 2.6439035204992374 9 0.6814837285760111 2.5050277010294297 >10 2.9153888861045765 18.279766958407915 >50 0.07655954576008465 2.172476111948278 >100 0.04927970761035102 3.679857171039056 >500 0.004399973893781341 1.3736791627397835 >1k 0.007039958230050146 5.929966642083643 >5k 8.799947787562683E-4 1.8288766142337487 >10k+ 4.3999738937813414E-4 3.2081266893289655 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17852 3.1699187987975193 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGC 5092 0.9041690860114814 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCG 5085 0.9029261198681036 No Hit GAATCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTC 4354 0.7731249411810664 RNA PCR Primer, Index 30 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCC 3641 0.6465199611484297 No Hit GCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 3336 0.5923621506155345 Illumina Single End Adapter 2 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 2803 0.4977191571269015 RNA PCR Primer, Index 30 (95% over 24bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2793 0.49594349120779024 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 2074 0.3682731116236867 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1933 0.3432362221642171 No Hit CTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGCT 1855 0.3293860279951489 RNA PCR Primer, Index 30 (96% over 25bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATCGGAACT 1701 0.30204077284083464 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1413 0.25090159437042875 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1326 0.2354533008741603 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1212 0.21521070939629133 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCG 1208 0.21450044302864682 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1184 0.21023884482277966 No Hit GAATGACTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCT 1148 0.20384644751397893 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1017 0.18058522397362073 No Hit TCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 992 0.17614605917584242 Illumina Single End Adapter 2 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCT 889 0.15785670020899586 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGC 887 0.15750156702517362 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATCGGAACTCGTA 860 0.15270726904357307 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 844 0.14986620357299496 No Hit GATAGAGGTTTTTTAGGATTAAGGATAAGCTAATTTTATTAAATGAAAATA 841 0.14933350379726157 No Hit ACTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 648 0.11506315155841318 Illumina Single End Adapter 2 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTG 585 0.10387645626801191 RNA PCR Primer, Index 30 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTC 566 0.10050269102170042 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5513318382226296E-4 0.0 0.0 0.360637748171508 0.0 2 3.5513318382226296E-4 0.0 0.0 1.8575241179823463 0.0 3 3.5513318382226296E-4 0.0 0.0 2.4477554694949473 0.0 4 3.5513318382226296E-4 0.0 0.0 3.353877788017451 0.0 5 3.5513318382226296E-4 0.0 0.0 6.154813208823639 0.0 6 3.5513318382226296E-4 0.0 0.0 7.366350065433289 0.0 7 3.5513318382226296E-4 0.0 0.0 8.698987337726331 0.0 8 3.5513318382226296E-4 0.0 0.0 10.34059047994474 0.0 9 3.5513318382226296E-4 0.0 0.0 10.914308138409607 0.0 10 3.5513318382226296E-4 0.0 0.0 13.729271319976775 0.0 11 3.5513318382226296E-4 0.0 0.0 16.944824732895455 0.0 12 3.5513318382226296E-4 0.0 0.0 20.37008429086118 0.0 13 3.5513318382226296E-4 0.0 0.0 21.38718572932814 0.0 14 3.5513318382226296E-4 0.0 0.0 21.823821978837614 0.0 15 3.5513318382226296E-4 0.0 0.0 22.819260293091418 0.0 16 3.5513318382226296E-4 0.0 0.0 24.47027446468112 0.0 17 3.5513318382226296E-4 0.0 0.0 26.46523512480268 0.0 18 3.5513318382226296E-4 0.0 0.0 28.27463869637711 0.0 19 3.5513318382226296E-4 0.0 0.0 29.88055095362138 0.0 20 3.5513318382226296E-4 0.0 0.0 31.331270009535327 0.0 21 3.5513318382226296E-4 0.0 0.0 32.82797881275425 0.0 22 3.5513318382226296E-4 0.0 0.0 34.485207815060846 0.0 23 3.5513318382226296E-4 0.0 0.0 35.83382608062589 0.0 24 3.5513318382226296E-4 0.0 0.0 36.733023302063856 0.0 25 3.5513318382226296E-4 0.0 0.0 37.47099005804652 0.0 26 3.5513318382226296E-4 0.0 0.0 38.09780012749281 0.0 27 3.5513318382226296E-4 0.0 0.0 38.660508657259186 0.0 28 3.5513318382226296E-4 0.0 0.0 39.20954455944841 0.0 29 3.5513318382226296E-4 0.0 0.0 39.76674852486554 0.0 30 3.5513318382226296E-4 0.0 0.0 40.3578677093377 0.0 31 3.5513318382226296E-4 0.0 0.0 40.84013857296833 0.0 32 3.5513318382226296E-4 0.0 0.0 41.31015734175709 0.0 33 3.5513318382226296E-4 0.0 0.0 41.742354426468786 0.0 34 3.5513318382226296E-4 0.0 0.0 42.13601956073577 0.0 35 3.5513318382226296E-4 0.0 0.0 42.58348737235182 0.0 36 3.5513318382226296E-4 0.0 0.0 42.968629310207064 0.0 37 3.5513318382226296E-4 0.0 0.0 43.38005110366515 0.0 38 3.5513318382226296E-4 0.0 0.0 43.77282840497257 0.0 39 3.5513318382226296E-4 0.0 0.0 44.139858550452885 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGGCG 35 1.2104465E-7 45.0 7 TTCTACG 20 7.030219E-4 45.0 1 CGGCGAA 25 3.888263E-5 45.0 31 TCCGCTA 35 1.2104465E-7 45.0 2 GATCGAC 25 3.888263E-5 45.0 10 CGACGGT 50 2.1827873E-11 45.0 28 CTATACG 20 7.030219E-4 45.0 1 GACCGTC 40 6.8048394E-9 45.0 9 CGGTTAG 20 7.030219E-4 45.0 1 GGCGTAT 40 6.8048394E-9 45.0 7 CAGCACG 20 7.030219E-4 45.0 1 ATCCGCT 35 1.2104465E-7 45.0 1 AACGGGC 25 3.888263E-5 45.0 4 CACTCGA 20 7.030219E-4 45.0 41 TGACCGG 25 3.888263E-5 45.0 2 CGCTAGT 35 1.2104465E-7 45.0 4 GCGATCG 35 1.2104465E-7 45.0 33 TCGTAAG 20 7.030219E-4 45.0 1 GGTTGCG 20 7.030219E-4 45.0 1 ACCGTCT 25 3.888263E-5 45.0 10 >>END_MODULE