##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935200.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1087938 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.544690046675456 31.0 31.0 34.0 30.0 34.0 2 31.65234691682798 31.0 31.0 34.0 30.0 34.0 3 31.664654603479242 31.0 31.0 34.0 30.0 34.0 4 35.490302756223244 37.0 35.0 37.0 33.0 37.0 5 32.859913892151944 37.0 35.0 37.0 28.0 37.0 6 33.90634760436716 36.0 35.0 37.0 26.0 37.0 7 35.3167239309593 37.0 35.0 37.0 32.0 37.0 8 35.30545306809763 37.0 35.0 37.0 33.0 37.0 9 37.34175752662376 39.0 37.0 39.0 34.0 39.0 10 36.68194786835279 39.0 35.0 39.0 32.0 39.0 11 36.64816469320862 39.0 37.0 39.0 32.0 39.0 12 36.98708658030145 39.0 37.0 39.0 33.0 39.0 13 36.93713060854571 39.0 37.0 39.0 33.0 39.0 14 37.79794528732336 39.0 37.0 41.0 33.0 41.0 15 37.94554836764595 39.0 37.0 41.0 33.0 41.0 16 37.936894381848965 40.0 37.0 41.0 33.0 41.0 17 37.914286475883735 39.0 37.0 41.0 33.0 41.0 18 37.84908515007289 39.0 37.0 40.0 33.0 41.0 19 37.6893692471446 39.0 37.0 40.0 33.0 41.0 20 37.52938402739862 39.0 35.0 40.0 33.0 41.0 21 37.451101073774424 39.0 35.0 40.0 33.0 41.0 22 37.473601436846586 39.0 35.0 40.0 33.0 41.0 23 37.18893631806224 39.0 35.0 40.0 32.0 41.0 24 36.93428761565457 39.0 35.0 40.0 32.0 41.0 25 36.74801780983843 39.0 35.0 40.0 31.0 41.0 26 37.09689246997531 39.0 35.0 40.0 32.0 41.0 27 37.01870970588398 39.0 35.0 40.0 32.0 41.0 28 37.11076090733112 39.0 35.0 40.0 32.0 41.0 29 37.210646194911845 39.0 35.0 40.0 33.0 41.0 30 36.957608797560155 39.0 35.0 40.0 32.0 41.0 31 36.82383463028224 39.0 35.0 40.0 31.0 41.0 32 36.62279376214453 39.0 35.0 40.0 31.0 41.0 33 36.53427493110821 39.0 35.0 40.0 31.0 41.0 34 36.44497756305966 39.0 35.0 40.0 30.0 41.0 35 36.28655125567817 39.0 35.0 40.0 30.0 41.0 36 36.19675937415551 39.0 35.0 40.0 30.0 41.0 37 36.11250641121093 39.0 35.0 40.0 29.0 41.0 38 36.00164439517693 39.0 35.0 40.0 29.0 41.0 39 35.93450453978076 39.0 35.0 40.0 28.0 41.0 40 35.86439668436988 39.0 35.0 40.0 27.0 41.0 41 35.78727831916893 39.0 35.0 40.0 27.0 41.0 42 35.88978416049444 39.0 35.0 40.0 27.0 41.0 43 35.79174640466644 39.0 35.0 40.0 26.0 41.0 44 35.682003937724396 39.0 35.0 40.0 26.0 41.0 45 35.66299090573176 39.0 35.0 40.0 25.0 41.0 46 35.575432607372846 39.0 35.0 40.0 25.0 41.0 47 35.50345240261853 39.0 35.0 40.0 24.0 41.0 48 35.469623268973045 39.0 35.0 40.0 24.0 41.0 49 35.49270914335192 39.0 35.0 40.0 24.0 41.0 50 35.424210754656976 39.0 35.0 40.0 24.0 41.0 51 34.57646299697225 38.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 18.0 10 18.0 11 30.0 12 25.0 13 33.0 14 46.0 15 80.0 16 133.0 17 254.0 18 465.0 19 757.0 20 1314.0 21 2239.0 22 3522.0 23 5248.0 24 7998.0 25 11513.0 26 14978.0 27 16708.0 28 17279.0 29 17782.0 30 20140.0 31 24422.0 32 30480.0 33 41448.0 34 61059.0 35 82787.0 36 112804.0 37 157229.0 38 247056.0 39 210025.0 40 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.067991006840465 22.86196456048047 24.046682807292328 18.02336162538674 2 35.49568082004673 23.465675433710377 25.552559061270035 15.486084684972855 3 27.47886368524677 23.771483301438135 34.95098066250099 13.798672350814108 4 24.62971235493199 25.200700775228 33.828490226465114 16.341096643374897 5 19.251188946428933 32.77576479542033 31.76385051354029 16.209195744610447 6 21.520527824195863 32.77962530953051 32.80618932328864 12.893657542984988 7 69.48199254001607 6.457261351290239 18.756307804305024 5.304438304388669 8 67.1916046686484 6.0538376267765255 19.21396256036649 7.540595144208585 9 61.177199435997274 9.326634422182147 21.916506271497088 7.579659870323492 10 23.003792495528238 37.51969321781205 26.849324134279712 12.627190152380008 11 19.378585912064842 23.280738424432272 37.50425116137133 19.836424502131557 12 19.965751724822553 20.115668356101175 40.75213844906603 19.16644147001024 13 20.44417972347689 21.665389020330203 42.73469627864823 15.155734977544677 14 15.75236824157259 25.111449365680766 39.8092538361561 19.32692855659054 15 12.94844007654848 25.64420031288548 43.18720368256279 18.22015592800325 16 14.363778082942227 26.804836305010028 38.24887079962277 20.582514812424975 17 14.244469813537169 26.542689013528342 36.879858962551175 22.332982210383314 18 13.949875820129456 25.334531931047543 41.70927019738257 19.00632205144043 19 14.357527726763841 27.163404532243568 38.67260818171624 19.806459559276355 20 14.171120045443766 28.914423432217646 38.896426083104004 18.01803043923459 21 14.701021565567155 27.37619239331653 40.136294531489845 17.78649150962647 22 12.891359617919404 24.420233505953465 37.6350490561043 25.053357820022832 23 12.380117249328547 25.538128091858177 39.05792425671316 23.02383040210012 24 15.280925935117626 24.209008233925093 37.073344253073245 23.436721577884036 25 13.050743700468226 27.643119368934627 34.960080445760696 24.34605648483645 26 12.09931080631433 26.82864280868947 37.40295862448043 23.669087760515765 27 15.15555114353943 25.31366677145205 38.28416692863013 21.246615156378397 28 12.038185999569828 25.500993622798358 37.58651687871919 24.874303498912624 29 13.924230976397553 24.001735393009525 35.706262673056735 26.367770957536184 30 16.780459915914324 25.318630289593706 35.210646194911845 22.690263599580124 31 16.11553231893729 28.515871308842968 30.895510589757873 24.47308578246187 32 14.497793072767015 29.275381501519387 31.324762992008736 24.90206243370486 33 15.235702769826956 25.024128213188618 32.87117464414332 26.868994372841097 34 15.201693478856331 23.08192194775805 31.487915671665114 30.2284689017205 35 12.5404205019036 24.437973487459764 33.28884550406365 29.732760506572987 36 15.837942971014893 23.106371870455853 35.6387036761286 25.41698148240065 37 17.181769549367704 25.60853651586763 35.214966294035136 21.99472764072953 38 16.315359882640372 27.486400879461883 32.13850421623291 24.05973502166484 39 17.64328481953935 22.89873136152979 31.568710716971005 27.889273101959855 40 17.049684816598003 20.60494256106506 33.9818077868408 28.363564835496142 41 15.320634080250898 21.499570747597748 34.443231140009814 28.736564032141537 42 17.77316354424609 20.73950905290559 38.64797442501319 22.839352977835134 43 19.669319391362375 20.99963417032956 36.51972814627304 22.811318292035025 44 18.98996082497348 21.754180844864322 30.563322542277227 28.69253578788497 45 19.178298763348646 19.24061849112725 30.444014272872167 31.137068472651936 46 20.575345286220355 19.925859745684036 33.34417953964288 26.154615428452725 47 15.07668635528863 21.118574771724123 39.16059554864339 24.64414332434385 48 15.896402184683318 20.59382060374764 37.84848033619563 25.661296875373413 49 19.39329263248457 17.971336601901946 38.31891155562174 24.316459209991745 50 17.609091694563478 16.751781811095853 36.15968924699753 29.47943724734314 51 16.58881296544472 16.396798346964626 32.76785993319472 34.24652875439593 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5242.0 1 7238.5 2 9235.0 3 23651.0 4 38067.0 5 24197.0 6 10327.0 7 10017.5 8 9708.0 9 10047.5 10 10387.0 11 10392.5 12 10398.0 13 10208.5 14 10019.0 15 9392.5 16 8766.0 17 8724.0 18 8682.0 19 8696.5 20 8711.0 21 8584.0 22 8457.0 23 9113.5 24 9770.0 25 10707.5 26 12421.0 27 13197.0 28 14052.5 29 14908.0 30 16168.0 31 17428.0 32 18431.5 33 19435.0 34 20607.0 35 21779.0 36 23293.5 37 24808.0 38 26600.0 39 28392.0 40 32339.5 41 36287.0 42 44962.0 43 53637.0 44 65277.5 45 76918.0 46 100019.5 47 123121.0 48 142627.0 49 162133.0 50 153120.0 51 144107.0 52 112283.5 53 80460.0 54 60557.0 55 40654.0 56 31305.5 57 21957.0 58 18561.5 59 15166.0 60 13155.0 61 11144.0 62 9861.5 63 8579.0 64 7109.0 65 5639.0 66 4427.5 67 3216.0 68 2716.5 69 2217.0 70 1800.0 71 1383.0 72 1100.0 73 817.0 74 664.5 75 414.0 76 316.0 77 239.0 78 162.0 79 121.5 80 81.0 81 60.5 82 40.0 83 25.0 84 10.0 85 11.0 86 12.0 87 7.5 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1087938.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.698710556141755 #Duplication Level Percentage of deduplicated Percentage of total 1 67.88128372601336 24.911555836403004 2 12.227071484373988 8.97435514708591 3 5.70639209420979 6.2825169535578205 4 3.328883708741747 4.886629588086763 5 2.2200557995490593 4.07365926030674 6 1.6058193627250492 3.5358899998856765 7 1.2529969725228602 3.2188361255636853 8 0.990949450750654 2.909325365509272 9 0.8003447386598013 2.643445791828627 >10 3.7636290329933644 22.208473531751537 >50 0.1412660773827765 3.5507746596831438 >100 0.06947164266011978 4.583186579520167 >500 0.006432559465956177 1.5849514073728483 >1k 0.0043741404368502 2.7921961939836244 >5k 7.719071359147413E-4 1.6370749210380144 >10k+ 2.573023786382471E-4 2.2071286384231734 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23374 2.1484680193172774 No Hit GCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 6566 0.6035270392246617 TruSeq Adapter, Index 13 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 5489 0.5045324273993554 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCC 5282 0.48550560785633007 No Hit CTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGCT 4198 0.3858675770126606 TruSeq Adapter, Index 16 (95% over 23bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3690 0.3391737396800185 No Hit TCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 3255 0.2991898435388781 TruSeq Adapter, Index 13 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 1921 0.1765725620393809 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCG 1686 0.1549720664229028 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1542 0.14173601804514596 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1440 0.1323604837775682 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1319 0.12123852646014753 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTC 1302 0.11967593741555124 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1278 0.11746992935259178 No Hit ACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 1254 0.11526392128963232 TruSeq Adapter, Index 16 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 1214 0.11158724118469987 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGC 1202 0.11048423715322013 No Hit AGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 1117 0.10267129193023868 TruSeq Adapter, Index 16 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 1108 0.10184403890662888 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.191700262331126E-5 0.0 0.0 0.4155567688599902 0.0 2 9.191700262331126E-5 0.0 0.0 2.1003954269452856 0.0 3 9.191700262331126E-5 0.0 0.0 2.871303327946997 0.0 4 9.191700262331126E-5 0.0 0.0 3.9919554239304076 0.0 5 9.191700262331126E-5 0.0 0.0 7.06161564353851 0.0 6 9.191700262331126E-5 0.0 0.0 8.860523301879335 0.0 7 9.191700262331126E-5 0.0 0.0 10.692245330156682 0.0 8 9.191700262331126E-5 0.0 0.0 13.625500717871791 0.0 9 9.191700262331126E-5 0.0 0.0 14.603129957773328 0.0 10 9.191700262331126E-5 0.0 0.0 17.623798414983206 0.0 11 9.191700262331126E-5 0.0 0.0 22.120653934323464 0.0 12 1.8383400524662252E-4 0.0 0.0 25.71672282795527 0.0 13 1.8383400524662252E-4 0.0 0.0 27.084263992984894 0.0 14 1.8383400524662252E-4 0.0 0.0 27.61664727217911 0.0 15 1.8383400524662252E-4 0.0 0.0 28.71137877342275 0.0 16 1.8383400524662252E-4 0.0 0.0 30.835856455055342 0.0 17 1.8383400524662252E-4 0.0 0.0 33.64759756530243 0.0 18 2.757510078699338E-4 0.0 0.0 36.41558618230083 0.0 19 2.757510078699338E-4 0.0 0.0 38.16154964713063 0.0 20 2.757510078699338E-4 0.0 0.0 40.12167972807274 0.0 21 2.757510078699338E-4 0.0 0.0 42.364822260092026 0.0 22 2.757510078699338E-4 0.0 0.0 44.71679452321732 0.0 23 2.757510078699338E-4 0.0 0.0 46.5983355669165 0.0 24 2.757510078699338E-4 0.0 0.0 47.841880695407276 0.0 25 2.757510078699338E-4 0.0 0.0 48.78421380630146 0.0 26 2.757510078699338E-4 0.0 0.0 49.588395662252815 0.0 27 2.757510078699338E-4 0.0 0.0 50.330349707428184 0.0 28 2.757510078699338E-4 0.0 0.0 51.05741319817857 0.0 29 2.757510078699338E-4 0.0 0.0 51.74054036167502 0.0 30 2.757510078699338E-4 0.0 0.0 52.48010456478218 0.0 31 2.757510078699338E-4 0.0 0.0 53.092547553261305 0.0 32 2.757510078699338E-4 0.0 0.0 53.59340330055573 0.0 33 2.757510078699338E-4 0.0 0.0 54.0372705062237 0.0 34 2.757510078699338E-4 0.0 0.0 54.475163106721155 0.0 35 2.757510078699338E-4 0.0 0.0 54.92923309968031 0.0 36 2.757510078699338E-4 0.0 0.0 55.341297022440614 0.0 37 2.757510078699338E-4 0.0 0.0 55.72753226746377 0.0 38 2.757510078699338E-4 0.0 0.0 56.132150913011586 0.0 39 2.757510078699338E-4 0.0 0.0 56.5820846408527 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACAC 20 7.0331205E-4 45.0 30 AGTCACG 25 3.890668E-5 45.0 1 TTAGCGT 20 7.0331205E-4 45.0 30 CTATACG 20 7.0331205E-4 45.0 1 TAGCGCG 20 7.0331205E-4 45.0 1 TAGCGAA 20 7.0331205E-4 45.0 1 AATATCG 25 3.890668E-5 45.0 17 TGCGAAG 50 2.1827873E-11 45.0 1 TTACGCG 25 3.890668E-5 45.0 1 GGTTACG 25 3.890668E-5 45.0 1 CGCATCG 30 2.165394E-6 44.999996 21 CGGTCTA 135 0.0 43.333336 31 CGTTATT 580 0.0 43.060345 1 CGTTTTT 8010 0.0 43.03371 1 ACGCATG 110 0.0 42.954544 1 CGTTAGG 155 0.0 42.096775 2 CGACGGT 145 0.0 41.89655 28 CGTTTTC 135 0.0 41.666668 1 GCGTTAG 65 0.0 41.538464 1 ACGTTAG 60 3.6379788E-12 41.249996 1 >>END_MODULE