##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935196.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2671613 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.141333718618675 33.0 31.0 34.0 30.0 34.0 2 32.28690046050831 34.0 31.0 34.0 30.0 34.0 3 32.18183209918502 33.0 31.0 34.0 30.0 34.0 4 35.88920476131835 37.0 35.0 37.0 35.0 37.0 5 33.36832729890145 37.0 35.0 37.0 30.0 37.0 6 34.42986540340985 37.0 35.0 37.0 29.0 37.0 7 35.7057620246645 37.0 35.0 37.0 32.0 37.0 8 35.70087284348444 37.0 35.0 37.0 35.0 37.0 9 37.828928441357334 39.0 38.0 39.0 35.0 39.0 10 37.43451053726719 39.0 37.0 39.0 34.0 39.0 11 37.332710239095256 39.0 37.0 39.0 34.0 39.0 12 37.49778280012861 39.0 37.0 39.0 35.0 39.0 13 37.44993904431517 39.0 37.0 39.0 35.0 39.0 14 38.59115186218962 40.0 38.0 41.0 34.0 41.0 15 38.697947270057455 40.0 38.0 41.0 34.0 41.0 16 38.70397733504067 40.0 38.0 41.0 34.0 41.0 17 38.614907922666944 40.0 38.0 41.0 34.0 41.0 18 38.20774940083014 39.0 38.0 40.0 34.0 41.0 19 37.67505323562956 38.0 37.0 40.0 34.0 41.0 20 37.10241378523012 38.0 35.0 40.0 34.0 41.0 21 37.0049370923109 38.0 35.0 40.0 33.0 41.0 22 36.982900592263924 38.0 35.0 40.0 33.0 41.0 23 36.7814975447417 38.0 35.0 40.0 33.0 41.0 24 36.51581273185899 37.0 35.0 40.0 33.0 41.0 25 36.33098768421923 37.0 35.0 40.0 32.0 41.0 26 36.55447252277931 38.0 35.0 40.0 33.0 41.0 27 36.45590922038484 38.0 35.0 40.0 33.0 41.0 28 36.42260911292167 38.0 35.0 40.0 33.0 41.0 29 36.36764755973264 38.0 35.0 40.0 33.0 41.0 30 35.95801113409764 37.0 35.0 40.0 31.0 41.0 31 35.5502028175488 37.0 35.0 40.0 30.0 41.0 32 34.85089831498799 37.0 35.0 40.0 22.0 41.0 33 34.102875304170176 38.0 34.0 40.0 18.0 41.0 34 33.41688710153753 38.0 33.0 40.0 12.0 41.0 35 32.938391900323886 38.0 33.0 40.0 10.0 41.0 36 32.58878175843582 37.0 33.0 40.0 9.0 41.0 37 32.48224724164765 37.0 32.0 40.0 8.0 41.0 38 32.37880860738438 37.0 32.0 40.0 8.0 41.0 39 32.221971894881484 37.0 31.0 40.0 8.0 41.0 40 32.10660713209585 37.0 31.0 40.0 8.0 41.0 41 31.905059228263973 37.0 30.0 40.0 8.0 41.0 42 31.845057274388168 37.0 30.0 40.0 7.0 41.0 43 31.71717797450454 36.0 30.0 40.0 7.0 41.0 44 31.633643794965813 36.0 30.0 40.0 7.0 41.0 45 31.642660819512407 36.0 29.0 40.0 7.0 41.0 46 31.581570758938515 36.0 29.0 40.0 7.0 41.0 47 31.51274267642806 36.0 29.0 40.0 7.0 41.0 48 31.458781268095343 36.0 29.0 40.0 7.0 41.0 49 31.43671370067446 35.0 29.0 40.0 7.0 41.0 50 31.34749456601686 35.0 28.0 40.0 7.0 41.0 51 30.655744301289147 35.0 26.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 21.0 9 42.0 10 54.0 11 60.0 12 69.0 13 112.0 14 172.0 15 254.0 16 483.0 17 895.0 18 1782.0 19 3299.0 20 5823.0 21 9598.0 22 15278.0 23 24343.0 24 41430.0 25 71367.0 26 103006.0 27 112103.0 28 99377.0 29 83393.0 30 71438.0 31 69751.0 32 74741.0 33 92406.0 34 134208.0 35 189645.0 36 238764.0 37 258659.0 38 429299.0 39 539562.0 40 173.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.82366832321897 13.889399400287392 17.315868727993163 38.971063548500474 2 51.68098822696251 18.27079745457145 19.12174405499599 10.926470263470046 3 21.663803851830334 18.6245912113768 49.100150358603585 10.61145457818928 4 18.913442927549763 18.33727414861359 50.334498297470475 12.414784626366169 5 16.89234181747132 26.88417072382864 44.549865568104366 11.673621890595681 6 18.150308446620077 24.856594124972442 46.72577951971337 10.26731790869411 7 56.27929644001583 4.321059973880947 36.332694892561165 3.066948693542066 8 57.29407664957462 5.022471443281643 34.8219596176542 2.8614922894895334 9 52.139512721341006 7.074939371832673 35.66287482505887 5.122673081767457 10 20.888841310474234 30.58538044245181 39.92741463677561 8.598363610298348 11 19.881322631683556 19.172649631514744 48.12089176089501 12.82513597590669 12 18.831694560551995 17.045732297305037 49.626087311298456 14.496485830844513 13 18.14746372322638 17.36729833250549 51.440384516769456 13.044853427498667 14 13.747724689167182 20.237100208750295 51.48900682845906 14.526168273623464 15 12.572966219284007 20.714789155465258 52.53096163254184 14.1812829927089 16 16.03454542255933 21.344670803742908 49.039250819635924 13.581532954061833 17 15.743335580415277 21.317496209218927 48.940770987414716 13.998397222951079 18 15.292783797653328 20.83400552400366 50.01854684791547 13.854663830427535 19 14.807496445031523 21.816071414534967 48.889902841466935 14.48652929896658 20 15.249663779896263 23.010069197896552 49.15274031081597 12.58752671139121 21 15.641037829955163 21.544961789001626 50.53171997590968 12.282280405133527 22 15.228290923872581 19.120621137866898 50.69925921156994 14.95182872669058 23 13.885356898622666 20.459175786313363 51.04384504791675 14.611622267147226 24 14.081867396213449 21.183345042863618 49.546771931413716 15.188015629509213 25 14.558545717512231 22.942357295012414 47.84858435709064 14.650512630384716 26 14.112335880982762 21.94344764754476 48.37905040887284 15.565166062599637 27 14.431206915073403 21.380267276735065 49.02162102070921 15.166904787482318 28 12.833782437800684 21.7214843616946 49.524650463970644 15.920082736534072 29 14.536311958356244 20.96512481411043 49.50417594165023 14.994387285883098 30 16.14432928721338 21.384758945251427 48.298836695284834 14.17207507225036 31 15.82976276878425 21.94097722986076 47.24722480389188 14.982035197463105 32 16.877332158512477 23.12883639958332 45.635838723647474 14.357992718256723 33 17.87182499860571 22.47076953136551 43.86024472855911 15.797160741469666 34 17.381634241186877 23.68408148934745 43.50371854007298 15.430565729392692 35 18.46992809213011 24.640844313903248 41.02210911535465 15.867118478611985 36 18.984823026388927 24.91775567793689 40.95641846330288 15.141002832371306 37 18.426022032382683 26.207762875835684 40.35416057640085 15.012054515380783 38 18.816572609880247 26.02727266261992 39.00841925832821 16.14773546917162 39 19.755817927222243 25.32795730519353 38.50261995281502 16.413604814769204 40 20.62409488200574 24.458145697000276 38.90342650675828 16.01433291423571 41 18.915015011530485 24.965591947636128 38.91525456718469 17.20413847364869 42 18.374292983302595 25.14638160541965 39.86314634642068 16.61617906485707 43 18.38649534943871 24.91423720426574 39.63362208523465 17.065645361060902 44 18.682009707244276 24.823018902812645 38.71941781987137 17.775553570071715 45 18.324547754483902 24.331892381119573 38.491540503808 18.85201936058853 46 18.8985829908748 24.469898896284754 39.06871990816035 17.562798204680092 47 17.02499576098784 24.907686854346046 41.04505405535907 17.02226332930705 48 17.470868722378576 24.791614653769088 40.089039842222654 17.648476781629675 49 17.849516378307786 23.694300035222167 41.02877175698726 17.42741182948279 50 17.32447775931619 23.66764946869176 40.483370907388164 18.52450186460389 51 17.15499213396551 23.414394225510957 39.644738964812646 19.78587467571089 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 11268.0 1 12043.5 2 12819.0 3 161033.0 4 309247.0 5 192525.5 6 75804.0 7 71346.5 8 66889.0 9 66622.0 10 66355.0 11 63816.5 12 61278.0 13 58843.0 14 56408.0 15 53418.5 16 50429.0 17 46884.0 18 43339.0 19 40311.0 20 37283.0 21 35837.5 22 34392.0 23 33576.5 24 32761.0 25 33225.0 26 34773.5 27 35858.0 28 39758.0 29 43658.0 30 47060.5 31 50463.0 32 54693.0 33 58923.0 34 63193.5 35 67464.0 36 71633.5 37 75803.0 38 80402.5 39 85002.0 40 88881.5 41 92761.0 42 99081.0 43 105401.0 44 114623.5 45 123846.0 46 151368.0 47 178890.0 48 175081.0 49 171272.0 50 166539.0 51 161806.0 52 139840.5 53 117875.0 54 104480.0 55 91085.0 56 84538.0 57 77991.0 58 71810.0 59 65629.0 60 58104.0 61 50579.0 62 44603.5 63 38628.0 64 34616.0 65 30604.0 66 25346.5 67 20089.0 68 16873.5 69 13658.0 70 11425.5 71 9193.0 72 7464.5 73 5736.0 74 4726.5 75 2807.5 76 1898.0 77 1410.0 78 922.0 79 658.5 80 395.0 81 306.5 82 218.0 83 197.0 84 176.0 85 116.0 86 56.0 87 38.5 88 21.0 89 20.0 90 19.0 91 15.0 92 11.0 93 7.0 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2671613.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.207650357440684 #Duplication Level Percentage of deduplicated Percentage of total 1 77.95012859501286 23.546902299156873 2 7.959800832580151 4.80893760930893 3 3.112342860175614 2.820496947379856 4 1.7025437014833211 2.0571937941068414 5 1.2067872465818137 1.822710360028099 6 0.8749089561303692 1.5857366304827765 7 0.6899316713322939 1.4588850288691433 8 0.5537121721357232 1.3381074955627952 9 0.49008653430842475 1.3323926405950879 >10 4.930149011082453 33.0837318375044 >50 0.4393933223632669 8.6173200035739 >100 0.08262333516709452 4.585523399367374 >500 0.002702152450497334 0.5346870500329007 >1k 0.0039888917126389214 2.790043359360397 >5k 7.720435572849525E-4 1.6398987089915735 >10k+ 1.2867392621415875E-4 7.977432835679155 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 205237 7.682138094102702 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 9400 0.3518473671149227 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8859 0.33159742822032984 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCG 7081 0.2650458730362519 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCC 6488 0.24284954445123602 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGC 5214 0.1951629970358731 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTT 5148 0.1926925793518747 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCT 4535 0.16974763934746537 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGT 4049 0.15155638185620446 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTC 4014 0.15024631187226595 No Hit GCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 3850 0.1441076982332396 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCG 3821 0.1430222116751191 No Hit CGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 3563 0.13336512436494358 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 3447 0.12902317813246156 No Hit CCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 3377 0.12640303816458448 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 3101 0.11607220057695482 No Hit GAACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCT 2811 0.10521733499574977 No Hit CTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGCT 2723 0.10192344475041858 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.486114193934526E-5 0.0 0.0 0.1092598366604744 0.0 2 7.486114193934526E-5 0.0 0.0 0.4644010940207283 0.0 3 7.486114193934526E-5 0.0 0.0 0.7193032823241989 0.0 4 7.486114193934526E-5 0.0 0.0 1.0910637131949874 0.0 5 7.486114193934526E-5 0.0 0.0 2.13466546240043 0.0 6 7.486114193934526E-5 0.0 0.0 2.9307388457834276 0.0 7 7.486114193934526E-5 0.0 0.0 3.622081491593281 0.0 8 7.486114193934526E-5 0.0 0.0 4.409620704795193 0.0 9 7.486114193934526E-5 0.0 0.0 4.87529443822889 0.0 10 7.486114193934526E-5 0.0 0.0 5.959845232075154 0.0 11 7.486114193934526E-5 0.0 0.0 6.999479340757812 0.0 12 7.486114193934526E-5 0.0 0.0 7.93269833617369 0.0 13 7.486114193934526E-5 0.0 0.0 8.267814238065169 0.0 14 7.486114193934526E-5 0.0 0.0 8.45979563656862 0.0 15 7.486114193934526E-5 0.0 0.0 8.72390574533063 0.0 16 7.486114193934526E-5 0.0 0.0 9.114306600544316 0.0 17 7.486114193934526E-5 0.0 0.0 9.59162124154958 0.0 18 7.486114193934526E-5 0.0 0.0 10.06493081146109 0.0 19 7.486114193934526E-5 0.0 0.0 10.47427153558543 0.0 20 7.486114193934526E-5 0.0 0.0 10.85958183314724 0.0 21 7.486114193934526E-5 0.0 0.0 11.281162353978663 0.0 22 7.486114193934526E-5 0.0 0.0 11.744365669728362 0.0 23 7.486114193934526E-5 0.0 0.0 12.117660754008908 0.0 24 7.486114193934526E-5 0.0 0.0 12.388807810113216 0.0 25 7.486114193934526E-5 0.0 0.0 12.624770129506032 0.0 26 7.486114193934526E-5 0.0 0.0 12.846359109646494 0.0 27 7.486114193934526E-5 0.0 0.0 13.074273856280831 0.0 28 1.1229171290901788E-4 0.0 0.0 13.277297273220336 0.0 29 1.1229171290901788E-4 0.0 0.0 13.49402027913474 0.0 30 1.1229171290901788E-4 0.0 0.0 13.721148983778713 0.0 31 1.1229171290901788E-4 0.0 0.0 13.91698573109204 0.0 32 1.1229171290901788E-4 0.0 0.0 14.110501783005247 0.0 33 1.1229171290901788E-4 0.0 0.0 14.285826577427194 0.0 34 1.1229171290901788E-4 0.0 0.0 14.466541374068774 0.0 35 1.4972228387869052E-4 0.0 0.0 14.651336102946049 0.0 36 1.8715285484836313E-4 0.0 0.0 14.82254353456133 0.0 37 1.8715285484836313E-4 0.0 0.0 15.005167290322364 0.0 38 1.8715285484836313E-4 0.0 0.0 15.226905992746705 0.0 39 2.2458342581803577E-4 0.0 0.0 15.582234402961806 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 74090 0.0 44.368336 1 CGTTATT 5480 0.0 44.21989 1 CGGTCTA 515 0.0 41.06796 31 TCACGAC 525 0.0 40.714283 25 GTTATTT 6125 0.0 40.22449 2 GTTTTTT 84095 0.0 39.367977 2 CTCACGA 560 0.0 38.169643 24 ACCACCG 1255 0.0 37.470123 14 TACGGCT 630 0.0 37.142857 7 CGACCAC 1750 0.0 37.02857 12 CGTAAGG 310 0.0 37.01613 2 TACGGGA 1635 0.0 36.743122 4 AGTACGG 325 0.0 36.692307 2 ATCGCCA 130 0.0 36.346153 24 CCGATGA 985 0.0 36.091373 18 GTCGATA 25 0.0021076067 36.000004 11 CCGTACC 25 0.0021076067 36.000004 20 ACGACGT 25 0.0021076067 36.000004 35 TCTCACG 600 0.0 35.625 23 TATGGGA 2315 0.0 35.475163 4 >>END_MODULE