##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935195.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 267841 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.689812239350957 31.0 31.0 34.0 30.0 34.0 2 31.794919373807595 33.0 31.0 34.0 30.0 34.0 3 31.793313943720342 33.0 31.0 34.0 30.0 34.0 4 35.60998876198939 37.0 35.0 37.0 33.0 37.0 5 33.05027609663942 37.0 35.0 37.0 28.0 37.0 6 34.092760257018156 37.0 35.0 37.0 28.0 37.0 7 35.35580811003543 37.0 35.0 37.0 32.0 37.0 8 35.29595170268928 37.0 35.0 37.0 33.0 37.0 9 37.396694307443596 39.0 37.0 39.0 34.0 39.0 10 36.9273860237977 39.0 37.0 39.0 33.0 39.0 11 36.858330128695755 39.0 37.0 39.0 33.0 39.0 12 37.169835835439685 39.0 37.0 39.0 34.0 39.0 13 37.09593378160924 39.0 37.0 39.0 33.0 39.0 14 38.06413879876494 40.0 37.0 41.0 33.0 41.0 15 38.22147094731576 40.0 38.0 41.0 33.0 41.0 16 38.19041147546492 40.0 37.0 41.0 33.0 41.0 17 38.103792921920096 40.0 37.0 41.0 33.0 41.0 18 37.93747036488066 39.0 37.0 40.0 34.0 41.0 19 37.62812638841701 39.0 36.0 40.0 33.0 41.0 20 37.41979009934999 39.0 35.0 40.0 33.0 41.0 21 37.303713770483235 39.0 35.0 40.0 33.0 41.0 22 37.26025515137712 39.0 35.0 40.0 33.0 41.0 23 36.985651935289965 39.0 35.0 40.0 33.0 41.0 24 36.67361232970307 38.0 35.0 40.0 32.0 41.0 25 36.487330169764896 38.0 35.0 40.0 31.0 41.0 26 36.7680414873003 38.0 35.0 40.0 32.0 41.0 27 36.67381020829522 38.0 35.0 40.0 32.0 41.0 28 36.742884771188876 38.0 35.0 40.0 32.0 41.0 29 36.788669397142336 39.0 35.0 40.0 33.0 41.0 30 36.4381032030197 38.0 35.0 40.0 31.0 41.0 31 36.274599482528814 38.0 35.0 40.0 31.0 41.0 32 35.916021072203286 38.0 35.0 40.0 30.0 41.0 33 35.597324532091804 38.0 35.0 40.0 28.0 41.0 34 35.4744456599251 38.0 35.0 40.0 26.0 41.0 35 35.17112017950949 38.0 35.0 40.0 24.0 41.0 36 34.95124719516429 38.0 35.0 40.0 23.0 41.0 37 34.9642474453127 38.0 35.0 40.0 23.0 41.0 38 34.819400315859035 38.0 35.0 40.0 23.0 41.0 39 34.6309489585239 38.0 35.0 40.0 21.0 41.0 40 34.540708853386896 38.0 35.0 40.0 21.0 41.0 41 34.386415821326835 38.0 34.0 40.0 21.0 41.0 42 34.44591380707211 38.0 35.0 40.0 21.0 41.0 43 34.36927505497665 38.0 34.0 40.0 20.0 41.0 44 34.29395051541773 38.0 34.0 40.0 18.0 41.0 45 34.26948450759966 38.0 34.0 40.0 20.0 41.0 46 34.05445394842462 38.0 34.0 40.0 18.0 41.0 47 33.91870923420985 38.0 33.0 40.0 18.0 41.0 48 33.863097882699066 37.0 33.0 40.0 18.0 41.0 49 33.850541925993404 37.0 33.0 40.0 18.0 41.0 50 33.74354187745715 37.0 33.0 40.0 16.0 41.0 51 32.826016181241854 36.0 32.0 40.0 14.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 3.0 10 14.0 11 6.0 12 9.0 13 19.0 14 17.0 15 35.0 16 45.0 17 77.0 18 138.0 19 277.0 20 473.0 21 835.0 22 1254.0 23 1914.0 24 2646.0 25 3995.0 26 5056.0 27 5355.0 28 5155.0 29 4978.0 30 5507.0 31 6385.0 32 8082.0 33 10604.0 34 15789.0 35 26646.0 36 30908.0 37 37226.0 38 53805.0 39 40572.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.306853693049234 26.611310441642615 21.41270380561602 19.66913205969213 2 36.41675471641758 26.148349207178885 23.03568161707879 14.39921445932475 3 26.03932930357936 25.331819997685194 35.85858774422139 12.770262954514058 4 23.815995310650724 26.637445350039762 34.753081119022106 14.79347822028741 5 16.73828876086932 34.63808752207466 33.35710365478026 15.266520062275754 6 19.603048077030778 33.854413625994525 34.485384985868485 12.057153311106216 7 61.13253758759861 10.616746502589223 22.727289697992465 5.523426211819699 8 58.34020930328067 10.235550195825136 23.09168499221553 8.332555508678656 9 52.737631654601046 13.260852520711916 26.145362360504926 7.856153464182109 10 21.834595898312806 35.95939381946752 30.786175380169578 11.419834902050097 11 16.780851325973245 27.36287573597769 37.54727618251126 18.3089967555378 12 17.488360631867415 24.513424009020277 41.56943858483205 16.428776774280262 13 17.52569621529191 27.48085617959909 41.99469088003704 12.998756725071964 14 12.887123330632727 30.934771002199067 38.75508230629366 17.42302336087455 15 11.352630851886007 29.4406009535508 43.00760525834357 16.199162936219622 16 11.423941816226792 31.41527996087231 38.81220574893314 18.348572473967764 17 10.981888508480777 31.1095015326257 36.26703902688536 21.641570932008168 18 11.549762732367338 30.054024589215246 41.88193741809506 16.514275260322357 19 11.52810809398113 31.390265119977894 38.795404736392115 18.28622204964886 20 12.084034931171853 33.62890670211058 38.857755160711015 15.429303206006548 21 12.598892626595628 32.1545245126773 40.214530262357144 15.032052598369926 22 10.627947177616571 31.603077945497514 35.97134120616336 21.797633670722554 23 10.795957303026796 30.537520394562446 37.15151899821162 21.515003304199134 24 14.614267419849835 29.427906855186475 35.953793481953845 20.004032243009846 25 10.927751912515262 32.49539838934293 34.44431584410154 22.132533854040272 26 10.611892876744038 32.31618758890536 37.99231633693124 19.079603197419363 27 13.582311893996813 30.47367654690656 35.902643732662284 20.04136782643434 28 9.838299588188516 29.43052034602619 36.44886331816264 24.282316747622655 29 13.7824306211521 27.541713180581016 37.25157836178927 21.42427783647761 30 15.775777420185857 31.07403272837243 32.342322497302504 20.80786735413921 31 15.047733543408215 33.090154233295124 29.59293013392274 22.26918208937392 32 15.831034083654108 34.16952595009726 29.306566209056868 20.69287375719177 33 15.393087690084789 34.547362054353144 27.997954010028337 22.06159624553373 34 16.487766996090965 30.37473725083165 30.48114366359146 22.656352089485924 35 15.151899821162557 33.35486351977479 29.388331136756506 22.104905522306144 36 15.470745703607738 34.922211311935065 28.081959072733447 21.525083911723748 37 16.928700236334244 31.782288745935087 29.50892507121762 21.780085946513044 38 17.56527193372187 35.35978434967014 25.410598078710876 21.66434563789711 39 20.808240709973454 33.745393722395 28.283571223225717 17.162794344405825 40 21.226772600162036 30.990774377335807 30.755560201761494 17.026892820740663 41 16.406748780059814 34.816551610843746 27.11310068286782 21.66359892622862 42 16.839468191949702 32.29453295051915 30.122722062716313 20.743276794814836 43 18.869030506905215 29.507431647880644 30.23136861048159 21.392169234732545 44 17.573859117909507 28.230181338928695 28.697622843403366 25.49833669975844 45 20.16756209840913 26.041196082750588 28.521025533805506 25.27021628503478 46 21.37574157802577 28.706210027590995 30.339641802412626 19.57840659197061 47 15.061174353441034 30.460609092707987 34.053038929812836 20.42517762403814 48 15.325883639920699 29.01236181167185 32.18289955607992 23.478854992327538 49 19.324151268849803 26.019914800198624 34.74188044399476 19.914053486956814 50 18.117091856735897 25.01969452025642 32.87846147527824 23.984752147729438 51 16.23313831713591 25.111913411314923 28.69836955507185 29.95657871647731 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6793.0 1 6825.0 2 6857.0 3 9785.5 4 12714.0 5 8206.0 6 3698.0 7 3670.0 8 3642.0 9 4117.5 10 4593.0 11 4709.0 12 4825.0 13 4717.0 14 4609.0 15 4260.0 16 3911.0 17 3885.0 18 3859.0 19 3625.0 20 3391.0 21 3169.0 22 2947.0 23 3016.5 24 3086.0 25 3087.0 26 3027.5 27 2967.0 28 3317.0 29 3667.0 30 3616.0 31 3565.0 32 3947.0 33 4329.0 34 4525.5 35 4722.0 36 4841.0 37 4960.0 38 5208.0 39 5456.0 40 6452.5 41 7449.0 42 9912.5 43 12376.0 44 14239.0 45 16102.0 46 20773.5 47 25445.0 48 30799.5 49 36154.0 50 34741.5 51 33329.0 52 25023.0 53 16717.0 54 12722.5 55 8728.0 56 6463.5 57 4199.0 58 3493.5 59 2788.0 60 2396.0 61 2004.0 62 1989.0 63 1974.0 64 1537.5 65 1101.0 66 902.0 67 703.0 68 608.5 69 514.0 70 377.0 71 240.0 72 206.5 73 173.0 74 130.0 75 62.0 76 37.0 77 27.0 78 17.0 79 14.0 80 11.0 81 8.0 82 5.0 83 3.0 84 1.0 85 2.0 86 3.0 87 4.0 88 5.0 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 267841.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.5243248095102 #Duplication Level Percentage of deduplicated Percentage of total 1 72.25316788357937 27.835045080630817 2 11.437585984317575 8.812505549931034 3 4.651949296523482 5.376396170899293 4 2.6614766167197796 4.101263586217162 5 1.7242498481051243 3.321278060057521 6 1.2397339585695903 2.865594821838885 7 0.9829955806293631 2.6508468724135055 8 0.8021802940141666 2.4722763361912112 9 0.6493364739020959 2.251372430813974 >10 3.3995261839963224 21.02320029349614 >50 0.10289485658203264 2.790162412855136 >100 0.08191629358957939 5.802383268774743 >500 0.00599387514070093 1.43626015514143 >1k 0.004994895950584108 4.244510517431626 >5k 0.0019979583802336434 5.016904443307524 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7129 2.661653742332205 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5907 2.205412912884883 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2773 1.035315728361229 No Hit CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 2394 0.8938138671823956 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCC 2231 0.8329568662004696 No Hit GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 2118 0.7907676569307911 No Hit CTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT 1513 0.5648873772126 No Hit ACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 746 0.2785234523467281 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 648 0.24193458059072362 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 639 0.2385743780825191 No Hit TCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 632 0.2359608872428045 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 560 0.20907926717716854 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC 507 0.18929140796218652 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 495 0.1848111379512472 No Hit ACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTG 424 0.15830287371985619 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 406 0.1515824687034472 No Hit GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 393 0.14672884285826293 No Hit AGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTG 371 0.13851501450487416 No Hit CGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTG 369 0.13776830283638428 No Hit GATTTAGGGAAGTATACTTTTAAATAATAAATTTTCAGAATTAATGTTTTC 352 0.13142125365422022 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGT 342 0.1276876953117708 No Hit GATAAGGGGATAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 325 0.12134064612960675 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 311 0.11611366445017754 No Hit ATGCCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC 306 0.1142468852789528 No Hit GCCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTG 304 0.11350017361046291 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTC 300 0.11200675027348314 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 293 0.10939325943376853 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.733558342449438E-4 0.0 0.0 0.598489402294645 0.0 2 3.733558342449438E-4 0.0 0.0 2.9566048513857104 0.0 3 3.733558342449438E-4 0.0 0.0 3.9131424987212564 0.0 4 3.733558342449438E-4 0.0 0.0 5.161271052602103 0.0 5 3.733558342449438E-4 0.0 0.0 8.640574071930734 0.0 6 3.733558342449438E-4 0.0 0.0 10.423721536284587 0.0 7 3.733558342449438E-4 0.0 0.0 12.188201208926191 0.0 8 3.733558342449438E-4 0.0 0.0 14.940580418979918 0.0 9 3.733558342449438E-4 0.0 0.0 15.88405061211689 0.0 10 3.733558342449438E-4 0.0 0.0 18.510982261864314 0.0 11 3.733558342449438E-4 0.0 0.0 23.052109273785568 0.0 12 3.733558342449438E-4 0.0 0.0 26.164776863885663 0.0 13 3.733558342449438E-4 0.0 0.0 27.332633913403846 0.0 14 3.733558342449438E-4 0.0 0.0 27.769460239470433 0.0 15 3.733558342449438E-4 0.0 0.0 28.69575606423214 0.0 16 3.733558342449438E-4 0.0 0.0 30.425140288454717 0.0 17 3.733558342449438E-4 0.0 0.0 32.60180480210274 0.0 18 3.733558342449438E-4 0.0 0.0 34.788549923275376 0.0 19 3.733558342449438E-4 0.0 0.0 36.09193514062447 0.0 20 3.733558342449438E-4 0.0 0.0 37.39382693463659 0.0 21 3.733558342449438E-4 0.0 0.0 38.99178990520495 0.0 22 3.733558342449438E-4 0.0 0.0 40.59871341579519 0.0 23 3.733558342449438E-4 0.0 0.0 41.983863560843936 0.0 24 3.733558342449438E-4 0.0 0.0 42.93853442900826 0.0 25 3.733558342449438E-4 0.0 0.0 43.63782990654904 0.0 26 3.733558342449438E-4 0.0 0.0 44.258347303064134 0.0 27 3.733558342449438E-4 0.0 0.0 44.788512587691955 0.0 28 3.733558342449438E-4 0.0 0.0 45.28582255890622 0.0 29 3.733558342449438E-4 0.0 0.0 45.82756187439563 0.0 30 3.733558342449438E-4 0.0 0.0 46.37602159490145 0.0 31 3.733558342449438E-4 0.0 0.0 46.86063746775139 0.0 32 3.733558342449438E-4 0.0 0.0 47.261994989564705 0.0 33 3.733558342449438E-4 0.0 0.0 47.69434104562035 0.0 34 3.733558342449438E-4 0.0 0.0 48.032228075612025 0.0 35 3.733558342449438E-4 0.0 0.0 48.38056906896256 0.0 36 3.733558342449438E-4 0.0 0.0 48.71136233810358 0.0 37 3.733558342449438E-4 0.0 0.0 49.04439574225007 0.0 38 3.733558342449438E-4 0.0 0.0 49.36846860637468 0.0 39 3.733558342449438E-4 0.0 0.0 49.70299543385815 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAAGG 45 3.8198777E-10 45.000004 2 GTTATGG 55 1.8189894E-12 45.000004 2 ACAACGA 20 7.0235884E-4 45.0 13 GTTTGCG 20 7.0235884E-4 45.0 1 GATACTC 20 7.0235884E-4 45.0 9 ACTATGC 20 7.0235884E-4 45.0 33 GGTACAC 25 3.8827682E-5 45.0 8 ATTAGTG 25 3.8827682E-5 45.0 14 ATTAGAC 20 7.0235884E-4 45.0 18 GTACACT 25 3.8827682E-5 45.0 9 CACGGGA 70 0.0 45.0 4 CGACGGT 20 7.0235884E-4 45.0 28 CAACGAG 20 7.0235884E-4 45.0 14 ACGTTGG 20 7.0235884E-4 45.0 2 ACTTGCG 20 7.0235884E-4 45.0 1 CGCATTA 20 7.0235884E-4 45.0 15 TAGGTGC 20 7.0235884E-4 45.0 11 ATGGACC 25 3.8827682E-5 45.0 10 GGACTAT 20 7.0235884E-4 45.0 8 AAGGTCT 20 7.0235884E-4 45.0 34 >>END_MODULE