##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935194.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 631308 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.6831451526038 31.0 31.0 34.0 30.0 34.0 2 31.790235511034233 33.0 31.0 34.0 30.0 34.0 3 31.786311911143216 33.0 31.0 34.0 30.0 34.0 4 35.58657105564954 37.0 35.0 37.0 33.0 37.0 5 33.04383280427303 37.0 35.0 37.0 28.0 37.0 6 34.07166549449714 37.0 35.0 37.0 28.0 37.0 7 35.417417488769345 37.0 35.0 37.0 32.0 37.0 8 35.399191836631246 37.0 35.0 37.0 33.0 37.0 9 37.473228598402045 39.0 37.0 39.0 35.0 39.0 10 36.86888967033524 39.0 37.0 39.0 32.0 39.0 11 36.775051163615856 39.0 37.0 39.0 32.0 39.0 12 37.093995323993994 39.0 37.0 39.0 33.0 39.0 13 37.035774930778636 39.0 37.0 39.0 33.0 39.0 14 37.938036584361356 40.0 37.0 41.0 33.0 41.0 15 38.10956775456671 40.0 37.0 41.0 33.0 41.0 16 38.112572626990314 40.0 37.0 41.0 33.0 41.0 17 38.080607247175706 40.0 37.0 41.0 33.0 41.0 18 37.9398233508842 39.0 37.0 40.0 33.0 41.0 19 37.734483009877906 39.0 37.0 41.0 33.0 41.0 20 37.52837917466593 39.0 35.0 40.0 33.0 41.0 21 37.45282492856102 39.0 35.0 40.0 33.0 41.0 22 37.437285762258675 39.0 35.0 40.0 33.0 41.0 23 37.19426809101105 39.0 35.0 40.0 33.0 41.0 24 36.91502246130256 39.0 35.0 40.0 32.0 41.0 25 36.74338833026035 38.0 35.0 40.0 32.0 41.0 26 37.05179722100781 39.0 35.0 40.0 33.0 41.0 27 36.993315465668104 39.0 35.0 40.0 33.0 41.0 28 37.06518846585185 39.0 35.0 40.0 33.0 41.0 29 37.10121050263896 39.0 35.0 40.0 33.0 41.0 30 36.83443580629423 39.0 35.0 40.0 32.0 41.0 31 36.685093488439875 39.0 35.0 40.0 31.0 41.0 32 36.418711627288104 39.0 35.0 40.0 31.0 41.0 33 36.214397726624725 39.0 35.0 40.0 30.0 41.0 34 36.06681524707433 39.0 35.0 40.0 30.0 41.0 35 35.80622612100591 39.0 35.0 40.0 27.0 41.0 36 35.66718305486387 39.0 35.0 40.0 26.0 41.0 37 35.649223516888746 39.0 35.0 40.0 26.0 41.0 38 35.48596564592877 39.0 35.0 40.0 25.0 41.0 39 35.349157621953154 39.0 35.0 40.0 24.0 41.0 40 35.253641645599295 39.0 35.0 40.0 24.0 41.0 41 35.161467936411384 39.0 35.0 40.0 23.0 41.0 42 35.250300962446225 39.0 35.0 40.0 23.0 41.0 43 35.15749998415987 39.0 35.0 40.0 23.0 41.0 44 35.06499521628112 39.0 35.0 40.0 22.0 41.0 45 35.021719984540034 39.0 35.0 40.0 23.0 41.0 46 34.88583227204471 38.0 35.0 40.0 22.0 41.0 47 34.82750099792811 38.0 35.0 40.0 22.0 41.0 48 34.77941195106034 38.0 35.0 40.0 22.0 41.0 49 34.796864604915505 38.0 35.0 40.0 22.0 41.0 50 34.707087507207255 38.0 35.0 40.0 20.0 41.0 51 33.761781887763185 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 10.0 10 21.0 11 9.0 12 30.0 13 26.0 14 43.0 15 61.0 16 98.0 17 181.0 18 295.0 19 557.0 20 959.0 21 1572.0 22 2336.0 23 3634.0 24 5300.0 25 7837.0 26 10420.0 27 11669.0 28 11377.0 29 11490.0 30 12048.0 31 14117.0 32 17478.0 33 24250.0 34 35104.0 35 49855.0 36 65333.0 37 86902.0 38 136541.0 39 121728.0 40 26.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.482693075329315 22.91401344510128 23.383831663783763 19.21946181578564 2 37.114372065616145 23.240953702471696 24.686999055928325 14.95767517598383 3 26.44477814315675 23.000025344205998 37.15634840679985 13.398848105837406 4 23.83448332668048 24.653576384268852 35.00272450214476 16.509215786905916 5 17.714332782096854 33.958701616326735 32.525803569731416 15.801162031844996 6 21.07259847808043 33.04963662744651 33.81788287175198 12.05988202272108 7 67.1070222458768 6.719857819004353 20.496651396782553 5.676468538336279 8 65.70738846965348 6.087678280649065 21.955052050663067 6.249881199034386 9 59.531797474449874 9.815335779049212 24.303192736350564 6.3496740101503555 10 23.614463938362892 37.816089769177644 27.79704993442187 10.772396358037598 11 19.20251287802467 24.919215343382312 38.08457995146585 17.79369182712717 12 19.987708060091112 21.143245452299038 40.31978051917606 18.549265968433794 13 20.557635892464535 21.784612265328494 42.54706102251199 15.110690819694984 14 15.178644972026333 25.48708395901842 40.709447686390796 18.624823382564454 15 13.19403524111844 25.81671703827609 43.6066072345036 17.38264048610187 16 15.318038105013718 26.28606005309611 39.74715986491538 18.64874197697479 17 14.98175217168165 26.296831340645138 37.43656028436199 21.28485620331122 18 14.042274135604174 26.105482585362456 42.10448782527704 17.747755453756326 19 14.438118953030852 27.223795675011246 40.07235770812345 18.265727663834454 20 14.29524099171878 28.989336425326467 40.61614932806174 16.099273254893014 21 14.63105172118839 27.14839666216807 41.8573818167994 16.363169799844133 22 13.602393760256485 25.560423755124283 38.83112521938578 22.00605726523345 23 12.512117698492652 26.04845812186761 40.45014477877677 20.98927940086297 24 14.73844779410367 26.243608508049952 38.22809151792786 20.78985217991852 25 12.989380777686963 28.013742895702254 36.41503038136694 22.581845945243842 26 12.124192945440262 27.76045923701268 38.35845577752856 21.756892040018503 27 14.218099564713263 25.869781469583785 39.761574382076574 20.150544583626377 28 10.982278063956104 25.934725997452908 39.27544083078307 23.807555107807914 29 12.611752108321136 25.818776255013397 37.28354464065084 24.285926996014624 30 15.306158008452291 27.85502480564162 36.84112984470338 19.99768734120271 31 14.488648963738775 29.701033409999557 33.26316156297718 22.547156063284483 32 14.03688849182966 30.14297300208456 32.64317892375829 23.176959582327488 33 14.465205573190898 28.332763088698385 33.313216369822655 23.888814968288063 34 15.701686023304 25.38507352987765 32.742021327149345 26.171219119669004 35 13.962439886711401 27.027219677241536 33.533235758140236 25.47710467790682 36 14.602381088153486 26.861848733106502 33.54717507143898 24.98859510730103 37 15.395496334594208 27.291591426055113 34.49995881566525 22.81295342368543 38 14.182300873741502 30.700228731459127 31.534528312646128 23.582942082153245 39 18.2961407110317 28.333555095135814 30.117945598661827 23.252358595170662 40 19.896944122361827 25.75858376576885 34.07829458837842 20.26617752349091 41 17.173233984045822 24.358949989545515 32.92323240003295 25.544583626375715 42 16.436192793375024 23.31445189986504 34.53274788217479 25.71660742458515 43 17.088172492666022 23.64630259714751 34.010340436047066 25.25518447413941 44 17.185747685757192 25.058450075082213 30.30755193978217 27.448250299378437 45 18.44598832899314 24.088875794382457 31.320844975827967 26.14429090079644 46 19.830257180330364 24.29226304751405 33.42948291483713 22.447996857318454 47 15.62818782591065 24.59987834781121 37.20846243038263 22.563471395895508 48 14.615845197589767 24.008883144202194 35.81785752754598 25.557414130662053 49 18.730477041317393 22.17269541966837 35.99906860042958 23.097758938584654 50 17.54341779289982 21.202487533818676 35.40078693759623 25.853307735685277 51 17.584918930221065 20.610541922484746 31.771338237437195 30.033200909856994 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5839.0 1 7208.5 2 8578.0 3 18303.0 4 28028.0 5 17776.0 6 7524.0 7 7439.5 8 7355.0 9 7511.5 10 7668.0 11 7721.5 12 7775.0 13 7744.5 14 7714.0 15 7664.0 16 7614.0 17 6962.0 18 6310.0 19 6022.0 20 5734.0 21 6391.0 22 7048.0 23 6597.0 24 6146.0 25 7069.5 26 8264.5 27 8536.0 28 9416.0 29 10296.0 30 10989.0 31 11682.0 32 11769.0 33 11856.0 34 13028.0 35 14200.0 36 15241.5 37 16283.0 38 17383.0 39 18483.0 40 20831.0 41 23179.0 42 27451.5 43 31724.0 44 36309.5 45 40895.0 46 51318.5 47 61742.0 48 71327.5 49 80913.0 50 76389.0 51 71865.0 52 56366.0 53 40867.0 54 31294.5 55 21722.0 56 17287.5 57 12853.0 58 11238.5 59 9624.0 60 8580.0 61 7536.0 62 6504.0 63 5472.0 64 4772.5 65 4073.0 66 3322.0 67 2571.0 68 2044.0 69 1517.0 70 1208.5 71 900.0 72 726.0 73 552.0 74 438.0 75 235.0 76 146.0 77 119.0 78 92.0 79 66.5 80 41.0 81 30.5 82 20.0 83 15.5 84 11.0 85 7.0 86 3.0 87 2.5 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 631308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.69545376577323 #Duplication Level Percentage of deduplicated Percentage of total 1 72.07879688831429 30.053581431492677 2 11.334297019741618 9.45177314708356 3 4.892703903356249 6.120105281760262 4 2.764841546968854 4.611252915653152 5 1.8922489208001616 3.9449088695278722 6 1.3654747177663564 3.4160452777775623 7 1.048710569217236 3.060852413673249 8 0.8215071187820542 2.7402489671544576 9 0.6832685819822936 2.5640274212683347 >10 2.96927341908084 19.117517883676264 >50 0.0890919361842087 2.503857485525374 >100 0.049625771119904113 3.790815447045606 >500 0.003907541033063316 1.06602937508142 >1k 0.005861311549594973 4.66784985420796 >5k 0.0 0.0 >10k+ 3.907541033063315E-4 2.8911342290722604 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17745 2.8108308464331198 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3898 0.6174482186191209 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGCC 3892 0.616497810894207 No Hit CCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGCCGTCTTCTGC 2906 0.46031414143334154 TruSeq Adapter, Index 13 (96% over 25bp) GCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGCCGTCTTCTGC 2778 0.44003877663517643 TruSeq Adapter, Index 13 (96% over 25bp) CTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGCCGTCTTCTGCT 1943 0.3077737015846465 Illumina PCR Primer Index 4 (95% over 23bp) GCTCAACTTGACCCCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTA 1674 0.2651637552510027 No Hit GCTCAACTTGACCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATG 1671 0.2646885513885457 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1481 0.23459230676626938 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1364 0.2160593561304466 No Hit TCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGCCGTCTTCTGC 1340 0.21225772523079067 TruSeq Adapter, Index 13 (96% over 25bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGCCG 1263 0.2000608260943945 No Hit GTTACAGGGAAGTAATACAATTATCTTTATAAATTTTAATTATAAAAATAT 1247 0.19752640549462386 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1098 0.17392461365925982 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1055 0.16711335829737622 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1040 0.16473733898509127 No Hit ACTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGCCGTCTTCTGC 889 0.1408187445747559 RNA PCR Primer, Index 13 (96% over 25bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGC 845 0.13384908792538666 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 791 0.12529541840116076 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGCCGT 670 0.10612886261539534 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTCAAGTCTCGTATGCCGTC 648 0.10264403429071073 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5840128748566469E-4 0.0 0.0 0.33501872303218083 0.0 2 1.5840128748566469E-4 0.0 0.0 1.6923593554968415 0.0 3 1.5840128748566469E-4 0.0 0.0 2.324222091277158 0.0 4 1.5840128748566469E-4 0.0 0.0 3.230752659557617 0.0 5 1.5840128748566469E-4 0.0 0.0 5.674567722886452 0.0 6 1.5840128748566469E-4 0.0 0.0 6.999119288841579 0.0 7 1.5840128748566469E-4 0.0 0.0 8.336501359083046 0.0 8 1.5840128748566469E-4 0.0 0.0 10.586433246529428 0.0 9 1.5840128748566469E-4 0.0 0.0 11.405367902830314 0.0 10 1.5840128748566469E-4 0.0 0.0 13.816710702224588 0.0 11 1.5840128748566469E-4 0.0 0.0 17.664911580401327 0.0 12 1.5840128748566469E-4 0.0 0.0 20.65172625723102 0.0 13 1.5840128748566469E-4 0.0 0.0 21.99259315579717 0.0 14 3.1680257497132937E-4 0.0 0.0 22.42011823072098 0.0 15 3.1680257497132937E-4 0.0 0.0 23.578190043528675 0.0 16 3.1680257497132937E-4 0.0 0.0 25.309991319609445 0.0 17 3.1680257497132937E-4 0.0 0.0 27.511452413085212 0.0 18 3.1680257497132937E-4 0.0 0.0 29.659849075253284 0.0 19 3.1680257497132937E-4 0.0 0.0 31.076748591812553 0.0 20 3.1680257497132937E-4 0.0 0.0 32.66979034005588 0.0 21 3.1680257497132937E-4 0.0 0.0 34.43960792513322 0.0 22 3.1680257497132937E-4 0.0 0.0 36.38382532773226 0.0 23 3.1680257497132937E-4 0.0 0.0 37.907804114631844 0.0 24 3.1680257497132937E-4 0.0 0.0 38.96085587383654 0.0 25 3.1680257497132937E-4 0.0 0.0 39.895106667426994 0.0 26 3.1680257497132937E-4 0.0 0.0 40.645136763671616 0.0 27 3.1680257497132937E-4 0.0 0.0 41.34970569040785 0.0 28 3.1680257497132937E-4 0.0 0.0 41.945136130066466 0.0 29 3.1680257497132937E-4 0.0 0.0 42.57779087228421 0.0 30 3.1680257497132937E-4 0.0 0.0 43.24830352221103 0.0 31 4.7520386245699406E-4 0.0 0.0 43.811420099222566 0.0 32 4.7520386245699406E-4 0.0 0.0 44.310859358664864 0.0 33 4.7520386245699406E-4 0.0 0.0 44.749472523712676 0.0 34 4.7520386245699406E-4 0.0 0.0 45.245426954830286 0.0 35 4.7520386245699406E-4 0.0 0.0 45.73187730869876 0.0 36 4.7520386245699406E-4 0.0 0.0 46.16066959392246 0.0 37 4.7520386245699406E-4 0.0 0.0 46.55017835984971 0.0 38 4.7520386245699406E-4 0.0 0.0 46.968674561386834 0.0 39 4.7520386245699406E-4 0.0 0.0 47.44942246890583 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGG 30 2.1639407E-6 45.000004 2 AACGGGC 45 3.8380676E-10 45.000004 4 CGACCCG 20 7.0308684E-4 45.0 32 CCGCTGA 20 7.0308684E-4 45.0 36 CCGTCAT 20 7.0308684E-4 45.0 22 TAGCACG 35 1.2107557E-7 45.0 1 TCCGTCA 20 7.0308684E-4 45.0 21 ATTGCGG 35 1.2107557E-7 45.0 2 TGCGAAG 25 3.888802E-5 44.999996 1 CGGGCCC 25 3.888802E-5 44.999996 6 CGTTTTT 5835 0.0 43.3419 1 CGTTATT 390 0.0 42.692307 1 TTGACCC 485 0.0 42.680412 8 ACTTGAC 670 0.0 42.64925 6 GCTCAAC 775 0.0 42.387093 1 CTCAACT 740 0.0 41.959457 2 ACGGGTA 70 0.0 41.785713 5 CTTGACC 685 0.0 41.71533 7 GTAATAC 205 0.0 41.707317 12 TTAACGG 65 0.0 41.53846 2 >>END_MODULE