##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935191.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 335443 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.76636865279645 31.0 31.0 34.0 30.0 34.0 2 31.876986552111685 33.0 31.0 34.0 30.0 34.0 3 31.899750479217037 33.0 31.0 34.0 30.0 34.0 4 35.66104226351422 37.0 35.0 37.0 33.0 37.0 5 33.04008430642464 37.0 35.0 37.0 28.0 37.0 6 34.12047650420489 37.0 35.0 37.0 28.0 37.0 7 35.43202272815352 37.0 35.0 37.0 32.0 37.0 8 35.402250158745304 37.0 35.0 37.0 33.0 37.0 9 37.461064920120556 39.0 37.0 39.0 35.0 39.0 10 36.95472852317681 39.0 37.0 39.0 33.0 39.0 11 36.81394752610727 39.0 37.0 39.0 33.0 39.0 12 37.09153567073989 39.0 37.0 39.0 33.0 39.0 13 37.03552913609764 39.0 37.0 39.0 33.0 39.0 14 37.94232105007408 40.0 37.0 41.0 33.0 41.0 15 38.10813759714765 40.0 37.0 41.0 33.0 41.0 16 38.1140611072522 40.0 37.0 41.0 33.0 41.0 17 38.081146424280725 40.0 37.0 41.0 33.0 41.0 18 37.97970445053258 39.0 37.0 41.0 33.0 41.0 19 37.77722593704445 39.0 37.0 41.0 33.0 41.0 20 37.576735838875756 39.0 35.0 41.0 33.0 41.0 21 37.510220812477826 39.0 35.0 41.0 33.0 41.0 22 37.50926386897327 39.0 35.0 41.0 33.0 41.0 23 37.2985633922902 39.0 35.0 40.0 33.0 41.0 24 37.06967204562325 39.0 35.0 40.0 32.0 41.0 25 36.855212360967435 39.0 35.0 40.0 32.0 41.0 26 37.09001529320928 39.0 35.0 40.0 33.0 41.0 27 36.97456497825264 39.0 35.0 40.0 32.0 41.0 28 36.994794942806976 39.0 35.0 40.0 32.0 41.0 29 37.04582894858441 39.0 35.0 40.0 33.0 41.0 30 36.835271566257155 39.0 35.0 40.0 32.0 41.0 31 36.603852219304024 39.0 35.0 40.0 31.0 41.0 32 36.33563973611016 39.0 35.0 40.0 30.0 41.0 33 36.22170085528689 39.0 35.0 40.0 30.0 41.0 34 36.003559472101074 39.0 35.0 40.0 30.0 41.0 35 35.7874542023533 39.0 35.0 40.0 27.0 41.0 36 35.628419731519216 39.0 35.0 40.0 26.0 41.0 37 35.46584367537853 39.0 35.0 40.0 25.0 41.0 38 35.392829780320355 38.0 35.0 40.0 25.0 41.0 39 35.37861872210778 39.0 35.0 40.0 25.0 41.0 40 35.26727342648378 38.0 35.0 40.0 24.0 41.0 41 35.14067367630268 38.0 35.0 40.0 23.0 41.0 42 35.17388945364786 38.0 35.0 40.0 23.0 41.0 43 35.063456384542235 38.0 35.0 40.0 23.0 41.0 44 34.98913675348718 38.0 35.0 40.0 23.0 41.0 45 35.00920871802363 38.0 35.0 40.0 23.0 41.0 46 34.93526769078502 38.0 35.0 40.0 23.0 41.0 47 34.852919870141875 38.0 35.0 40.0 23.0 41.0 48 34.81104092200463 38.0 34.0 40.0 23.0 41.0 49 34.82183560247196 38.0 34.0 40.0 23.0 41.0 50 34.73758283821692 38.0 34.0 40.0 22.0 41.0 51 33.762663105207146 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 5.0 11 9.0 12 16.0 13 13.0 14 23.0 15 45.0 16 52.0 17 79.0 18 141.0 19 315.0 20 489.0 21 822.0 22 1268.0 23 1763.0 24 2779.0 25 4030.0 26 5129.0 27 5946.0 28 5896.0 29 5933.0 30 6529.0 31 7684.0 32 9931.0 33 13277.0 34 19614.0 35 27196.0 36 34722.0 37 46800.0 38 69387.0 39 65517.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.54749092990463 22.815798809335714 23.11599884332062 17.520711417439028 2 36.94487588055198 23.173832812132016 24.66141788619825 15.219873421117747 3 27.626154070885367 23.640976261242596 34.978520940964636 13.754348726907404 4 24.94879905080744 24.607459389523704 35.01101528426588 15.432726275402974 5 19.561892780591634 32.63475463789675 32.049856458474316 15.753496123037298 6 21.93636474751299 32.232599875388665 33.238732064762125 12.592303312336222 7 67.70837370283476 7.046800797751033 20.35815324809282 4.886672251321387 8 66.33287920749575 6.808310204714363 20.332813622582673 6.525996965207204 9 59.93298414335669 9.68838222887346 22.656606338483737 7.722027289286109 10 25.886961421165445 33.57202266853086 28.531225871459533 12.009790038844155 11 21.698172267717617 23.57121776277937 36.02847577680858 18.702134192694437 12 21.531228852591948 20.61095327671169 40.15764228199724 17.700175588699125 13 21.51811186997493 21.602477917261652 41.61899339082944 15.260416821933982 14 16.25373014193171 26.130519939304143 39.23378934722144 18.381960571542706 15 13.913243084518085 25.74446329182603 42.38633687392493 17.95595674973095 16 16.378639590034673 26.812006808906432 37.2233136479223 19.5860399531366 17 15.92371878381722 26.222935044105856 36.699230569724214 21.15411560235271 18 15.847103680804189 25.502395339893813 40.545189495681825 18.105311483620167 19 15.132526241418065 26.24887089609859 38.83878930250445 19.779813559978894 20 14.98466207373533 28.969750449405712 39.28208369231136 16.7635037845476 21 15.562405535366663 26.915153990394792 40.686495172056055 16.835945302182488 22 14.20658651395319 25.039425476161377 38.26372886004478 22.490259149840657 23 14.006552529043685 25.336644377733325 39.30921199726928 21.347591095953707 24 15.90016783775485 25.31219909194707 37.197675909170854 21.589957161127227 25 13.76448457711146 28.420923972180073 35.391407780159376 22.423183670549097 26 13.630035505287038 28.964384411062387 36.30244184555945 21.10313823809112 27 16.62517924058633 27.356957813995226 37.017317398186876 19.00054554723157 28 12.394952346598378 28.270973011808266 36.657196602701504 22.676878038891854 29 15.2732356913097 28.831127792203148 35.1961436071106 20.699492909376556 30 20.570707989136753 28.235795649335355 32.86668673962491 18.326809621902974 31 15.898975384789665 33.2974603732974 30.2957581466896 20.507806095223334 32 17.22617553503874 34.141418959405925 28.992407055744195 19.639998449811145 33 21.47458733674574 28.58250134896242 28.93248629424373 21.010425020048114 34 16.189933908294403 29.442259936859617 30.641867619834066 23.72593853501191 35 17.72760200689834 32.80974711053741 27.843478623790034 21.61917225877422 36 23.23673470604544 31.418750726651023 26.89428606350408 18.450228503799455 37 18.594813425827937 33.30849056322535 29.579690141096997 18.51700586984972 38 18.932873841457415 34.14827556395573 27.201640815280093 19.717209779306767 39 22.986915809839527 27.407338951774218 28.493067376573666 21.112677861812585 40 21.46415337330038 27.549538967872333 29.51798070014876 21.468326958678524 41 19.882662628225958 30.635309128525563 26.227108629483997 23.254919613764486 42 21.99568928253086 29.01446743560009 29.140867449909525 19.848975831959528 43 23.059953553957005 27.53552764553143 30.103475106053786 19.301043694457775 44 21.100157105678164 26.763712463816507 28.638248525084737 23.49788190542059 45 21.67134207600099 25.457678353699436 27.985380526646853 24.88559904365272 46 23.14968563958705 27.284814409601633 29.432422199896852 20.133077750914463 47 18.46274925993388 28.678195699418378 32.91736599064521 19.941689050002534 48 19.058975742525554 27.61422954123353 31.808682846265985 21.51811186997493 49 22.395757252349878 23.90927817840885 33.25870565192894 20.43625891731233 50 20.60111553974893 22.969625241844366 31.986954564560893 24.44230465384581 51 19.456658806414204 22.413047820345035 29.288433504350962 28.841859868889795 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2740.0 1 3874.0 2 5008.0 3 9349.0 4 13690.0 5 8859.5 6 4029.0 7 3829.0 8 3629.0 9 3700.5 10 3772.0 11 3957.0 12 4142.0 13 3932.5 14 3723.0 15 3588.5 16 3454.0 17 3081.0 18 2708.0 19 2915.0 20 3122.0 21 3082.0 22 3042.0 23 2827.0 24 2612.0 25 3006.5 26 3610.5 27 3820.0 28 4132.5 29 4445.0 30 4730.0 31 5015.0 32 5458.0 33 5901.0 34 6737.5 35 7574.0 36 7786.0 37 7998.0 38 8604.5 39 9211.0 40 10375.5 41 11540.0 42 13809.0 43 16078.0 44 18680.0 45 21282.0 46 27145.5 47 33009.0 48 38078.5 49 43148.0 50 41825.5 51 40503.0 52 32082.5 53 23662.0 54 18604.0 55 13546.0 56 11070.5 57 8595.0 58 7410.5 59 6226.0 60 5345.0 61 4464.0 62 4054.5 63 3645.0 64 3038.0 65 2431.0 66 2038.5 67 1646.0 68 1283.0 69 920.0 70 826.0 71 732.0 72 592.0 73 452.0 74 316.0 75 176.0 76 172.0 77 120.0 78 68.0 79 60.0 80 52.0 81 40.0 82 28.0 83 22.0 84 16.0 85 13.5 86 11.0 87 5.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 335443.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.50685609697904 #Duplication Level Percentage of deduplicated Percentage of total 1 73.65741013870414 32.7825975351947 2 10.948085722768127 9.745297516012636 3 4.436138029602216 5.92315670729526 4 2.5931195261255153 4.616463903661392 5 1.6746942993702738 3.726768909425196 6 1.2854263101613779 3.432617028577392 7 0.9080654303429723 2.8290596204441205 8 0.7927789203493715 2.8227277859766304 9 0.6502759173985642 2.6047563011090036 >10 2.9363645779292855 19.69657763108823 >50 0.07004067113620598 2.1799845031861405 >100 0.038080364889587714 3.097315202777587 >500 0.00544005212708396 1.555618540382724 >1k 0.003400032579427475 2.440868390697796 >5k 6.80006515885495E-4 2.546190424171179 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8413 2.5080266990218902 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2035 0.6066604460370316 No Hit GCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 1714 0.5109660955810674 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCC 1595 0.47549061986686264 No Hit CCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 1551 0.4623736372498457 No Hit CTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGCT 1170 0.3487924923161312 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 828 0.24683776379295438 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 760 0.22656606338483737 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 660 0.19675473925525347 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 650 0.1937736068422951 No Hit TCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 649 0.19347549360099928 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 570 0.16992454753862804 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGC 520 0.15501888547383608 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCG 503 0.14995096037180683 No Hit ACTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 499 0.14875850740662347 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCG 492 0.1466717147175526 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTC 471 0.14041133665034 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 399 0.11894718327703961 No Hit CGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTG 337 0.10046416231669762 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4197434437445408 0.0 2 0.0 0.0 0.0 2.0182266435728278 0.0 3 0.0 0.0 0.0 2.739958800750053 0.0 4 0.0 0.0 0.0 3.7064419290311617 0.0 5 0.0 0.0 0.0 6.291083731066083 0.0 6 0.0 0.0 0.0 7.614110295937015 0.0 7 0.0 0.0 0.0 9.066518007530341 0.0 8 0.0 0.0 0.0 11.18342013397209 0.0 9 0.0 0.0 0.0 11.914691914870783 0.0 10 0.0 0.0 0.0 14.222386515741869 0.0 11 0.0 0.0 0.0 17.995307697582003 0.0 12 0.0 0.0 0.0 20.925760859520096 0.0 13 0.0 0.0 0.0 22.0430892878969 0.0 14 0.0 0.0 0.0 22.503376132457674 0.0 15 0.0 0.0 0.0 23.388772459106317 0.0 16 0.0 0.0 0.0 25.188482096809295 0.0 17 0.0 0.0 0.0 27.353380455099675 0.0 18 0.0 0.0 0.0 29.45120333409849 0.0 19 0.0 0.0 0.0 30.89615821465942 0.0 20 0.0 0.0 0.0 32.38881121382769 0.0 21 0.0 0.0 0.0 34.04602272219125 0.0 22 0.0 0.0 0.0 35.75957763315973 0.0 23 0.0 0.0 0.0 37.06352495058773 0.0 24 0.0 0.0 0.0 38.010332604943315 0.0 25 0.0 0.0 0.0 38.763366652456604 0.0 26 0.0 0.0 0.0 39.468404468121264 0.0 27 2.9811324129583864E-4 0.0 0.0 40.14124605372597 0.0 28 2.9811324129583864E-4 0.0 0.0 40.71034423135973 0.0 29 2.9811324129583864E-4 0.0 0.0 41.22280089314727 0.0 30 2.9811324129583864E-4 0.0 0.0 41.80948775201748 0.0 31 2.9811324129583864E-4 0.0 0.0 42.29660478829488 0.0 32 2.9811324129583864E-4 0.0 0.0 42.71306898638517 0.0 33 2.9811324129583864E-4 0.0 0.0 43.07974827317905 0.0 34 2.9811324129583864E-4 0.0 0.0 43.453582277764035 0.0 35 2.9811324129583864E-4 0.0 0.0 43.821752130764395 0.0 36 5.962264825916773E-4 0.0 0.0 44.14997480943111 0.0 37 5.962264825916773E-4 0.0 0.0 44.5300691920833 0.0 38 5.962264825916773E-4 0.0 0.0 44.90360508342699 0.0 39 5.962264825916773E-4 0.0 0.0 45.36329570150517 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGATG 35 1.208482E-7 45.000004 1 CGTAAGG 35 1.208482E-7 45.000004 2 TGCTACG 35 1.208482E-7 45.000004 1 TCACGAC 45 3.8380676E-10 45.0 25 TCGTTCA 20 7.026135E-4 45.0 16 CTCGTTC 20 7.026135E-4 45.0 15 CGACGGT 45 3.8380676E-10 45.0 28 CAACGAG 25 3.8848797E-5 45.0 14 GCGCGAC 20 7.026135E-4 45.0 9 CGACAAG 20 7.026135E-4 45.0 12 TAGCCAG 20 7.026135E-4 45.0 1 ATCCGGG 25 3.8848797E-5 45.0 3 CCCCGAT 20 7.026135E-4 45.0 40 CTACGAA 25 3.8848797E-5 45.0 11 CTCATGG 25 3.8848797E-5 45.0 2 TTGCGAG 20 7.026135E-4 45.0 1 TTAACGG 20 7.026135E-4 45.0 2 CGGTCTA 45 3.8380676E-10 45.0 31 GCTACGG 40 6.7902874E-9 45.0 2 GCTACGA 25 3.8848797E-5 45.0 10 >>END_MODULE