##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935187.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1542409 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.938308191925746 33.0 31.0 34.0 30.0 34.0 2 32.06998143812698 33.0 31.0 34.0 30.0 34.0 3 32.01214723202471 33.0 31.0 34.0 30.0 34.0 4 35.7644489885627 37.0 35.0 37.0 35.0 37.0 5 33.11875838380092 37.0 35.0 37.0 28.0 37.0 6 34.22795574973953 37.0 35.0 37.0 28.0 37.0 7 35.58548024551205 37.0 35.0 37.0 32.0 37.0 8 35.607311679327594 37.0 35.0 37.0 33.0 37.0 9 37.70121089801732 39.0 37.0 39.0 35.0 39.0 10 36.9742344605095 39.0 37.0 39.0 32.0 39.0 11 36.97376506490821 39.0 37.0 39.0 33.0 39.0 12 37.28674819713837 39.0 37.0 39.0 34.0 39.0 13 37.274130272839436 39.0 37.0 39.0 34.0 39.0 14 38.29645703571491 40.0 38.0 41.0 33.0 41.0 15 38.427751653420074 40.0 38.0 41.0 34.0 41.0 16 38.41762139614071 40.0 38.0 41.0 34.0 41.0 17 38.369436381660115 40.0 38.0 41.0 34.0 41.0 18 38.1378512443846 39.0 38.0 41.0 34.0 41.0 19 37.77741442120735 39.0 37.0 41.0 34.0 41.0 20 37.43212533121889 39.0 35.0 41.0 34.0 41.0 21 37.32997992101965 39.0 35.0 40.0 33.0 41.0 22 37.34087910534755 39.0 35.0 40.0 33.0 41.0 23 37.11365662415092 39.0 35.0 40.0 33.0 41.0 24 36.84577112815084 38.0 35.0 40.0 33.0 41.0 25 36.64156912984818 38.0 35.0 40.0 32.0 41.0 26 36.90920825799123 38.0 35.0 40.0 33.0 41.0 27 36.82555210712593 38.0 35.0 40.0 33.0 41.0 28 36.842126828876125 39.0 35.0 40.0 33.0 41.0 29 36.84504369463612 39.0 35.0 40.0 33.0 41.0 30 36.50238166400741 39.0 35.0 40.0 31.0 41.0 31 36.2056698320614 39.0 35.0 40.0 31.0 41.0 32 35.76967587715061 39.0 35.0 40.0 28.0 41.0 33 35.30345453119114 39.0 35.0 41.0 23.0 41.0 34 34.89299206630667 39.0 35.0 41.0 20.0 41.0 35 34.575530874106676 39.0 35.0 41.0 18.0 41.0 36 34.36491034479182 39.0 35.0 41.0 15.0 41.0 37 34.301735791220096 39.0 35.0 41.0 15.0 41.0 38 34.220672337881844 39.0 34.0 41.0 15.0 41.0 39 34.0726279475807 39.0 34.0 40.0 15.0 41.0 40 33.914024101259784 38.0 34.0 40.0 12.0 41.0 41 33.79225873293011 38.0 34.0 40.0 12.0 41.0 42 33.8492604750102 38.0 34.0 40.0 12.0 41.0 43 33.77404307158477 38.0 34.0 40.0 10.0 41.0 44 33.68110079751869 38.0 33.0 40.0 10.0 41.0 45 33.6376564192766 38.0 33.0 40.0 10.0 41.0 46 33.54042734449812 38.0 33.0 40.0 10.0 41.0 47 33.48217885139415 38.0 33.0 40.0 10.0 41.0 48 33.43748383210938 38.0 33.0 40.0 10.0 41.0 49 33.40234075397641 38.0 33.0 40.0 10.0 41.0 50 33.302163693287575 38.0 33.0 40.0 10.0 41.0 51 32.453574246519565 37.0 31.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 8.0 9 22.0 10 31.0 11 30.0 12 37.0 13 59.0 14 102.0 15 149.0 16 253.0 17 492.0 18 891.0 19 1599.0 20 2765.0 21 4555.0 22 7214.0 23 11518.0 24 19332.0 25 31764.0 26 42953.0 27 44828.0 28 39762.0 29 34449.0 30 32430.0 31 34537.0 32 40648.0 33 53151.0 34 77878.0 35 107978.0 36 141249.0 37 179996.0 38 299063.0 39 332577.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.069969119734132 19.127157582716386 21.27833797650299 28.52453532104649 2 44.48262425854621 19.878968548549704 22.024119413203632 13.614287779700456 3 24.602683205297687 20.67155987808681 42.50480903573566 12.220947880879844 4 22.469072729736407 21.74228755148602 41.64355887446196 14.145080844315613 5 17.94874122233467 30.518429288210847 37.96483293341779 13.567996556036693 6 20.707607385589686 28.291782529795924 39.533483012612095 11.467127072002302 7 65.17130021933222 5.078289869937222 26.179437490315472 3.5709724204150777 8 65.59563643625005 4.298016933251816 26.101377779823636 4.004968850674497 9 59.87497479591989 7.595845200592061 27.990954409628056 4.538225593859995 10 22.263290735466406 32.03488828190188 35.65176292410119 10.05005805853052 11 20.73302217505214 21.843881875689263 41.95994706981093 15.463148879447669 12 20.140507478885304 19.528737189681856 44.071578939178906 16.259176392253934 13 20.336305091580765 19.51246394438829 45.682111554068996 14.46911940996195 14 16.10046362540675 22.29123403714579 45.099127403950575 16.509174933496887 15 14.563582033040523 23.469909732113855 46.135622911951366 15.830885322894254 16 17.35512435417584 23.796022974451006 43.55478994222673 15.294062729146422 17 16.843781383537053 23.274695622237683 42.691789272495164 17.1897337217301 18 16.903363504751333 22.878886209818535 44.84251583075566 15.375234454674475 19 16.00308348823172 24.321823848278893 43.66241379556266 16.01267886792673 20 16.132491446821174 25.75354526587954 43.25519366134404 14.858769625955242 21 16.093461591575256 24.202594772203742 45.18898683812141 14.514956798099595 22 15.820511939440188 21.637970214126085 44.31729845974706 18.22421938668667 23 13.946300883877106 23.034681462569267 45.00369227617318 18.01532537738045 24 15.19421891340105 23.102108455020684 43.5442868914795 18.15938574009877 25 15.152271544058676 25.01269118631958 42.053891023716794 17.781146245904942 26 14.420494175021023 24.713743241902762 42.84985370287647 18.015908880199742 27 15.005228833597315 23.558926328879046 43.42142713119542 18.014417706328217 28 12.918428250872498 23.385950159782524 43.626884957232484 20.068736632112493 29 14.78622077542338 22.61455943267966 43.99760374842211 18.60161604347485 30 16.817718257608718 22.97464550582887 41.89984627942394 18.307789957138475 31 15.107795662499376 25.353586500078773 40.05280052178119 19.485817315640663 32 15.66802320266544 24.449027462884356 40.36082517672031 19.522124157729888 33 16.792238634499668 23.89372727985897 38.45692031101997 20.85711377462139 34 15.405835935863962 24.496161523953763 39.1679509131495 20.93005162703278 35 15.351181171790362 24.892619272838786 37.925738244525284 21.830461310845568 36 17.18876121703128 25.315140147652148 36.47320522636992 21.022893408946654 37 15.894098128317458 25.98279704021437 36.61091189172262 21.512192939745553 38 17.26228257226196 25.422764000988064 35.978719003843985 21.336234422905985 39 19.461310197230436 24.141845645350877 36.21840899527946 20.178435162139223 40 19.4856228147009 24.843540202371745 36.04899867674528 19.62183830618208 41 16.82588729707879 25.261393054630776 35.26943891017233 22.6432807381181 42 17.263125409667605 23.901636984742698 37.340031081250174 21.495206524339526 43 17.88111972894349 23.125254066852566 37.48175743269133 21.511868771512617 44 18.947114546141783 23.27197260908099 35.302957905458285 22.47795493931895 45 19.023553415468918 22.467257387631946 35.45531697493985 23.053872221959285 46 19.043133176738465 23.50783741536778 35.94267149634111 21.50635791155264 47 16.136770467495975 24.743437052040022 37.83140528873989 21.288387191724116 48 16.422751682595212 23.64878576304988 37.70653568541159 22.221926868943324 49 18.78217774922216 21.92271958994015 38.03200059128285 21.263102069554833 50 17.550532964991774 22.092518910353867 37.32038648633404 23.036561638320315 51 17.215602346718672 21.79324679770411 35.58524360270201 25.40590725287521 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5312.0 1 7778.0 2 10244.0 3 59903.0 4 109562.0 5 68378.5 6 27195.0 7 25826.5 8 24458.0 9 24814.5 10 25171.0 11 25010.5 12 24850.0 13 24130.5 14 23411.0 15 22243.5 16 21076.0 17 20569.5 18 20063.0 19 19541.0 20 19019.0 21 18059.0 22 17099.0 23 17383.5 24 17668.0 25 17833.0 26 20079.5 27 22161.0 28 23180.5 29 24200.0 30 26850.0 31 29500.0 32 32118.5 33 34737.0 34 37167.5 35 39598.0 36 41754.5 37 43911.0 38 46984.5 39 50058.0 40 54289.0 41 58520.0 42 65604.5 43 72689.0 44 81559.5 45 90430.0 46 106016.0 47 121602.0 48 136116.5 49 150631.0 50 143513.0 51 136395.0 52 114451.0 53 92507.0 54 77211.0 55 61915.0 56 52146.5 57 42378.0 58 38227.0 59 34076.0 60 29763.0 61 25450.0 62 21753.5 63 18057.0 64 15191.0 65 12325.0 66 10026.0 67 7727.0 68 6152.5 69 4578.0 70 3551.0 71 2524.0 72 2043.0 73 1562.0 74 1155.5 75 651.0 76 553.0 77 383.5 78 214.0 79 161.0 80 108.0 81 89.5 82 71.0 83 53.0 84 35.0 85 22.0 86 9.0 87 8.0 88 7.0 89 5.0 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1542409.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.73610912710351 #Duplication Level Percentage of deduplicated Percentage of total 1 73.76702591787233 26.361464881829583 2 9.880152936061863 7.061564470311578 3 4.219236138212953 4.5233724920459055 4 2.325570050687367 3.324273004563496 5 1.511640144709385 2.701006858612256 6 1.1035460671748512 2.366186561000783 7 0.8576518962472379 2.1454399230150987 8 0.7028678761894916 2.009421050035452 9 0.5902745658442716 1.8984704669968082 >10 4.797529985126064 31.543627767427417 >50 0.17863726171469813 4.31230003975206 >100 0.05986218461580059 3.6814383073986074 >500 0.0024395213146398862 0.6152154963434635 >1k 0.0031901432576060054 2.12716759799593 >5k 1.876554857415297E-4 0.43247490036178293 >10k+ 1.876554857415297E-4 4.896576182309862 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 73017 4.733958372908872 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCC 6449 0.41811218684538276 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3652 0.23677247733901968 No Hit GCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 3257 0.21116318693679823 No Hit CCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 2939 0.19054608732184525 No Hit CTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT 2485 0.16111161177093752 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCG 2402 0.15573041910414165 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1819 0.11793240314339451 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGT 1786 0.11579289280599374 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTC 1706 0.11060620107896155 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2966729317580487E-4 0.0 0.0 0.17206849804429306 0.0 2 1.2966729317580487E-4 0.0 0.0 0.7762532505969558 0.0 3 1.2966729317580487E-4 0.0 0.0 1.1279757833363264 0.0 4 1.2966729317580487E-4 0.0 0.0 1.6144226336853584 0.0 5 1.2966729317580487E-4 0.0 0.0 2.95706262087423 0.0 6 1.2966729317580487E-4 0.0 0.0 3.9787760574529845 0.0 7 1.2966729317580487E-4 0.0 0.0 4.915168415122059 0.0 8 1.2966729317580487E-4 0.0 0.0 6.330746254722321 0.0 9 1.2966729317580487E-4 0.0 0.0 6.911850229089691 0.0 10 1.2966729317580487E-4 0.0 0.0 8.399587917342288 0.0 11 1.945009397637073E-4 0.0 0.0 10.698653858995895 0.0 12 1.945009397637073E-4 0.0 0.0 12.317031345123116 0.0 13 1.945009397637073E-4 0.0 0.0 12.982030058175232 0.0 14 1.945009397637073E-4 0.0 0.0 13.261138906736152 0.0 15 1.945009397637073E-4 0.0 0.0 13.75199444505316 0.0 16 2.5933458635160974E-4 0.0 0.0 14.758796142916697 0.0 17 2.5933458635160974E-4 0.0 0.0 16.047818704377374 0.0 18 2.5933458635160974E-4 0.0 0.0 17.286011686913135 0.0 19 3.2416823293951214E-4 0.0 0.0 18.07004497510064 0.0 20 3.890018795274146E-4 0.0 0.0 18.991525594054494 0.0 21 3.890018795274146E-4 0.0 0.0 20.02011139717157 0.0 22 3.890018795274146E-4 0.0 0.0 21.129220589350815 0.0 23 3.890018795274146E-4 0.0 0.0 22.06593711525283 0.0 24 3.890018795274146E-4 0.0 0.0 22.73132483018447 0.0 25 3.890018795274146E-4 0.0 0.0 23.276381297048967 0.0 26 4.5383552611531704E-4 0.0 0.0 23.75193609477123 0.0 27 5.186691727032195E-4 0.0 0.0 24.223082204525518 0.0 28 5.186691727032195E-4 0.0 0.0 24.686513110335845 0.0 29 5.186691727032195E-4 0.0 0.0 25.137106954121766 0.0 30 5.186691727032195E-4 0.0 0.0 25.579077922911498 0.0 31 5.835028192911219E-4 0.0 0.0 25.981176199049667 0.0 32 5.835028192911219E-4 0.0 0.0 26.340095266560297 0.0 33 5.835028192911219E-4 0.0 0.0 26.678008232576445 0.0 34 5.835028192911219E-4 0.0 0.0 27.025451744641014 0.0 35 5.835028192911219E-4 0.0 0.0 27.367125062159257 0.0 36 5.835028192911219E-4 0.0 0.0 27.680855077998118 0.0 37 5.835028192911219E-4 0.0 0.0 28.001522294021886 0.0 38 6.483364658790243E-4 0.0 0.0 28.352596490295376 0.0 39 6.483364658790243E-4 0.0 0.0 28.849287056805295 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGAA 20 7.0340384E-4 45.0 9 TCGTAAT 20 7.0340384E-4 45.0 28 CGCGTCA 35 1.2122837E-7 45.0 39 CGTTTTT 27740 0.0 44.12401 1 CGTTATT 2100 0.0 43.071426 1 TCGTTGG 85 0.0 42.35294 2 CGGTCTA 315 0.0 42.142857 31 TACGGGA 940 0.0 40.45213 4 CGACGGT 335 0.0 40.298508 28 CGCCGCA 90 0.0 40.0 18 TCACGAC 355 0.0 39.929577 25 TAGTTCG 40 3.459245E-7 39.375 1 ACGGTCT 340 0.0 39.044117 30 GTTTGCG 35 6.24968E-6 38.571426 1 TTTAGCG 70 0.0 38.571426 1 CACGACG 350 0.0 38.571426 26 TATAGCG 70 0.0 38.571426 1 AGATGCG 35 6.24968E-6 38.571426 1 CTCACGA 370 0.0 38.31081 24 TAAGCGG 130 0.0 38.07692 2 >>END_MODULE