##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935186.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1389982 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52331109323718 31.0 31.0 34.0 30.0 34.0 2 31.626189403891562 31.0 31.0 34.0 30.0 34.0 3 31.66028337057602 31.0 31.0 34.0 30.0 34.0 4 35.49741579387359 37.0 35.0 37.0 33.0 37.0 5 33.02975506157634 37.0 35.0 37.0 28.0 37.0 6 33.99384236630402 36.0 35.0 37.0 28.0 37.0 7 35.351474335638876 37.0 35.0 37.0 32.0 37.0 8 35.35734419582412 37.0 35.0 37.0 33.0 37.0 9 37.33072946268369 39.0 37.0 39.0 34.0 39.0 10 36.71295959228249 39.0 35.0 39.0 32.0 39.0 11 36.64751557933844 39.0 37.0 39.0 32.0 39.0 12 37.042387599263876 39.0 37.0 39.0 33.0 39.0 13 37.033629212464625 39.0 37.0 39.0 33.0 39.0 14 37.87670631706022 39.0 37.0 41.0 33.0 41.0 15 37.99934891243196 39.0 37.0 41.0 33.0 41.0 16 37.96282110128045 39.0 37.0 41.0 33.0 41.0 17 37.981005509423866 39.0 37.0 41.0 33.0 41.0 18 37.94604606390586 39.0 37.0 40.0 33.0 41.0 19 37.811886772634466 39.0 37.0 40.0 33.0 41.0 20 37.66992450261946 39.0 36.0 40.0 33.0 41.0 21 37.59262781820196 39.0 36.0 40.0 33.0 41.0 22 37.60700714109967 39.0 36.0 40.0 33.0 41.0 23 37.337215877615684 39.0 35.0 40.0 32.0 41.0 24 37.07364555800003 39.0 35.0 40.0 32.0 41.0 25 36.8688508196509 39.0 35.0 40.0 31.0 41.0 26 37.22990513546218 39.0 35.0 40.0 32.0 41.0 27 37.185841255498275 39.0 35.0 40.0 33.0 41.0 28 37.31589977424168 39.0 36.0 40.0 33.0 41.0 29 37.486203418461535 39.0 36.0 40.0 33.0 41.0 30 37.26547178308784 39.0 36.0 40.0 33.0 41.0 31 37.15602576148468 39.0 36.0 40.0 32.0 41.0 32 37.02328663248877 39.0 36.0 40.0 32.0 41.0 33 36.87335951113036 39.0 36.0 40.0 31.0 41.0 34 36.831161122949794 39.0 36.0 41.0 31.0 41.0 35 36.680631116086396 39.0 36.0 41.0 31.0 41.0 36 36.51940600669649 39.0 35.0 41.0 30.0 41.0 37 36.528365115519485 39.0 35.0 41.0 30.0 41.0 38 36.424329955351936 39.0 35.0 40.0 30.0 41.0 39 36.3358856445623 39.0 35.0 40.0 30.0 41.0 40 36.27823597715654 39.0 35.0 40.0 30.0 41.0 41 36.1005977055818 39.0 35.0 40.0 29.0 41.0 42 36.1334261882528 39.0 35.0 40.0 29.0 41.0 43 36.030089598282565 39.0 35.0 40.0 29.0 41.0 44 36.0155505610864 39.0 35.0 40.0 29.0 41.0 45 36.064437525090256 39.0 35.0 40.0 29.0 41.0 46 35.91725072698783 39.0 35.0 40.0 28.0 41.0 47 35.78172379210666 39.0 35.0 40.0 27.0 41.0 48 35.74092182488694 39.0 35.0 40.0 27.0 41.0 49 35.76168684198788 39.0 35.0 40.0 27.0 41.0 50 35.690316853023994 39.0 35.0 40.0 27.0 41.0 51 34.66930938674026 38.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 12.0 10 23.0 11 33.0 12 32.0 13 44.0 14 46.0 15 82.0 16 136.0 17 220.0 18 433.0 19 798.0 20 1294.0 21 2243.0 22 3639.0 23 5571.0 24 8644.0 25 13167.0 26 17631.0 27 18852.0 28 19152.0 29 19835.0 30 22873.0 31 28010.0 32 36644.0 33 50379.0 34 74061.0 35 103622.0 36 147868.0 37 214778.0 38 339992.0 39 259825.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.67082163653918 22.588206178209504 24.25851557789957 17.48245660735175 2 33.73727141790325 24.312473111162593 25.378170364796095 16.572085106138065 3 26.451925276730204 23.879230090749378 34.578649219917956 15.090195412602464 4 24.70111123741171 24.681542638681652 33.33079133398849 17.286554789918142 5 18.294985114915157 31.231555516546255 32.00782456175691 18.46563480678167 6 21.08948173429584 31.29249155744463 33.037190409659985 14.58083629859955 7 69.05190139152882 5.302586652201251 19.02564205867414 6.619869897595796 8 65.642216949572 4.4390502898598685 20.168678443317972 9.75005431725015 9 59.866170928832176 7.226712288360569 23.10490351673619 9.802213266071073 10 25.0524826940205 32.74193478764473 28.27230856226915 13.933273956065618 11 16.09567605911443 20.587676674949748 39.78166623740451 23.534981028531305 12 17.096624272832308 18.113400029640673 43.18868877438701 21.601286923140012 13 18.897510903018887 20.38458051974774 45.390012244762886 15.327896332470491 14 15.213002758309099 24.734421021279413 39.38137328397058 20.671202936440903 15 11.239498065442573 24.818450886414357 44.38568269229386 19.556368355849212 16 12.042314217018637 26.974737802360032 37.96250598928619 23.02044199133514 17 11.922096832908629 26.346024624779314 36.25269967524759 25.479178867064466 18 12.16915039187558 24.65952796511034 42.39306696057935 20.778254682434735 19 11.924902624638305 26.852290173541814 38.69942200690369 22.523385194916195 20 12.521241282261208 29.390956141878092 38.72611300002446 19.361689575836234 21 13.000024460748413 28.493318618514486 39.875336515149115 18.631320405587985 22 10.877119272048127 25.489898430339387 35.760103368245055 27.872878929367428 23 10.735606648143644 25.902925361623385 37.21616538919209 26.145302601040875 24 15.497538817049431 23.341885002827375 35.68988663162544 25.47068954849775 25 11.881089107628732 28.183098773940955 33.173954770637316 26.761857347792994 26 11.787131056373392 26.651712036558745 38.29279803623356 23.268358870834298 27 15.475092483212013 24.364128456339724 37.93171422363743 22.229064836810835 28 9.872789719579103 23.332964023994553 37.20472639214033 29.58951986428601 29 12.655919285285707 19.480827809280985 38.31502853993793 29.54822436549538 30 16.200857277288485 22.448204365236386 35.84981676021704 25.50112159725809 31 12.098501994989864 25.66860578050651 30.50255327047401 31.73033895402962 32 11.732885749599635 24.565713800610368 32.54826321491933 31.153137234870666 33 12.767647350829003 22.392807964419685 30.712915706822102 34.126628977929215 34 11.616121647618458 18.87218683407411 32.29962690164333 37.2120646166641 35 10.429775349608844 19.35003474865142 37.574947013702335 32.6452428880374 36 12.225194283091435 23.58901050517201 35.844277120135374 28.341518091601188 37 11.174317365260846 21.9179816717051 35.245852104559624 31.66184885847443 38 11.77029630599533 22.82705819212047 29.418654342286448 35.98399115959775 39 16.259706960234016 20.600554539555187 28.0545359580196 35.0852025421912 40 16.06646704777472 17.562961246980176 35.032252216215745 31.338319489029352 41 13.608521549199917 23.000873392605083 33.71496897082121 29.675636087373793 42 15.707901253397527 22.868137860778052 37.73336633136257 23.690594554461857 43 17.55555107907872 20.927896908017512 34.94937344512375 26.567178567780015 44 16.47086077373664 18.598586168741754 29.789450510869926 35.14110254665168 45 18.627507406570732 14.141118374194775 30.58284207996938 36.648532139265114 46 20.927177474240676 16.940938803524077 33.18042967462888 28.951454047606372 47 12.530953638248555 19.973352172905837 39.409934804911146 28.085759383934466 48 13.875575367163028 19.266796260671 36.17938937338757 30.6782389987784 49 18.839380653850192 15.619410898846173 37.61041509890056 27.93079334840307 50 17.1507256928507 13.492117164107162 35.509956244037696 33.84720089900445 51 16.106899226033143 13.619241112474839 30.21449198622716 40.05936767526486 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4489.0 1 5978.5 2 7468.0 3 21477.0 4 35486.0 5 22542.0 6 9598.0 7 9455.5 8 9313.0 9 9711.0 10 10109.0 11 10325.5 12 10542.0 13 10770.5 14 10999.0 15 10503.5 16 10008.0 17 9242.5 18 8477.0 19 8428.0 20 8379.0 21 8393.0 22 8407.0 23 8241.0 24 8075.0 25 8862.5 26 10162.0 27 10674.0 28 11789.5 29 12905.0 30 14757.5 31 16610.0 32 17979.0 33 19348.0 34 21395.5 35 23443.0 36 24841.0 37 26239.0 38 29023.5 39 31808.0 40 36988.0 41 42168.0 42 53569.0 43 64970.0 44 83398.0 45 101826.0 46 146025.0 47 190224.0 48 223182.5 49 256141.0 50 239219.0 51 222297.0 52 166822.0 53 111347.0 54 80149.5 55 48952.0 56 35521.0 57 22090.0 58 17237.5 59 12385.0 60 10517.5 61 8650.0 62 7527.0 63 6404.0 64 5364.5 65 4325.0 66 3468.5 67 2612.0 68 2035.5 69 1459.0 70 1145.5 71 832.0 72 693.5 73 555.0 74 432.0 75 253.5 76 198.0 77 157.5 78 117.0 79 91.5 80 66.0 81 41.0 82 16.0 83 12.5 84 9.0 85 4.5 86 0.0 87 0.0 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1389982.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.91575303231235 #Duplication Level Percentage of deduplicated Percentage of total 1 66.65873524273238 21.941224666960746 2 12.748848737956878 8.392759130097913 3 5.963630676703011 5.888921835908343 4 3.4687096229821996 4.567007571635495 5 2.2863387663795356 3.762828109117524 6 1.7017102532664667 3.3607844657443633 7 1.2152432705329137 2.800045315692865 8 0.9632566900074413 2.5365055452006073 9 0.7793136813546157 2.308652700315362 >10 3.8659635732896116 21.588675677520456 >50 0.21593600697006324 4.9523640475334245 >100 0.11366828705731992 7.118049151769027 >500 0.009210274957538614 2.0688296044594625 >1k 0.008087070694424147 4.004119544683113 >5k 6.73922557868679E-4 1.4474191181705556 >10k+ 6.73922557868679E-4 3.2618135151906884 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22799 1.6402370678181444 No Hit CCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 10812 0.777851799519706 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 10502 0.7555493524376575 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGCT 7893 0.5678490800600295 TruSeq Adapter, Index 16 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 6101 0.43892654725025215 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCC 5581 0.4015159908545578 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3152 0.22676552646005488 No Hit ACTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 3052 0.2195711886916521 TruSeq Adapter, Index 16 (95% over 23bp) ACCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTG 2505 0.18021816109848904 TruSeq Adapter, Index 16 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTG 2344 0.1686352772913606 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCT 2020 0.14532562292173568 No Hit GAATCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTC 1950 0.14028958648385376 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTC 1937 0.1393543225739614 No Hit GCCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTG 1921 0.13820322853101694 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCG 1793 0.12899447618746143 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTC 1712 0.12316706259505518 No Hit CGTCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCT 1580 0.11367053674076355 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCG 1528 0.10992948110119412 No Hit GACCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCT 1493 0.10741146288225314 No Hit AGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTG 1436 0.10331069035426359 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGC 1418 0.10201570955595109 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.194337768402757E-5 0.0 0.0 0.6014466374384704 0.0 2 7.194337768402757E-5 0.0 0.0 2.9352898095083244 0.0 3 7.194337768402757E-5 0.0 0.0 4.0571028977353665 0.0 4 7.194337768402757E-5 0.0 0.0 5.654245882320779 0.0 5 7.194337768402757E-5 0.0 0.0 10.258190393832438 0.0 6 7.194337768402757E-5 0.0 0.0 13.022254964452777 0.0 7 7.194337768402757E-5 0.0 0.0 15.803226228828862 0.0 8 7.194337768402757E-5 0.0 0.0 19.97860403947677 0.0 9 7.194337768402757E-5 0.0 0.0 21.32135524057146 0.0 10 7.194337768402757E-5 0.0 0.0 25.273348863510464 0.0 11 7.194337768402757E-5 0.0 0.0 31.360981652999822 0.0 12 7.194337768402757E-5 0.0 0.0 36.07694200356551 0.0 13 7.194337768402757E-5 0.0 0.0 37.840202247223345 0.0 14 7.194337768402757E-5 0.0 0.0 38.50905982955175 0.0 15 7.194337768402757E-5 0.0 0.0 39.76605452444708 0.0 16 7.194337768402757E-5 0.0 0.0 42.24155420717678 0.0 17 7.194337768402757E-5 0.0 0.0 45.51728007988593 0.0 18 7.194337768402757E-5 0.0 0.0 48.511275685584415 0.0 19 7.194337768402757E-5 0.0 0.0 50.427919210464594 0.0 20 7.194337768402757E-5 0.0 0.0 52.223482030702556 0.0 21 7.194337768402757E-5 0.0 0.0 54.223867647206944 0.0 22 7.194337768402757E-5 0.0 0.0 56.349434740881534 0.0 23 7.194337768402757E-5 0.0 0.0 58.25053849618197 0.0 24 7.194337768402757E-5 0.0 0.0 59.54321710640857 0.0 25 7.194337768402757E-5 0.0 0.0 60.55711512810957 0.0 26 7.194337768402757E-5 0.0 0.0 61.370794729715925 0.0 27 7.194337768402757E-5 0.0 0.0 62.105984106269005 0.0 28 7.194337768402757E-5 0.0 0.0 62.768726501494264 0.0 29 7.194337768402757E-5 0.0 0.0 63.38326683367123 0.0 30 7.194337768402757E-5 0.0 0.0 64.04198039974618 0.0 31 7.194337768402757E-5 0.0 0.0 64.567526773728 0.0 32 7.194337768402757E-5 0.0 0.0 64.99371934312819 0.0 33 7.194337768402757E-5 0.0 0.0 65.37840058360467 0.0 34 1.4388675536805513E-4 0.0 0.0 65.74200241441976 0.0 35 1.4388675536805513E-4 0.0 0.0 66.10315817039357 0.0 36 2.158301330520827E-4 0.0 0.0 66.43776682000198 0.0 37 2.158301330520827E-4 0.0 0.0 66.7399290062749 0.0 38 2.158301330520827E-4 0.0 0.0 67.04835026640633 0.0 39 2.158301330520827E-4 0.0 0.0 67.36375003417311 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGTCG 20 7.0337974E-4 45.0 25 TTAGACG 25 3.8912287E-5 45.0 1 TAACGCG 25 3.8912287E-5 45.0 1 TCGCTAG 20 7.0337974E-4 45.0 1 ACTAACG 25 3.8912287E-5 45.0 1 ATAACGT 35 1.2121745E-7 45.0 31 TAGGACG 25 3.8912287E-5 45.0 1 TTACCGG 20 7.0337974E-4 45.0 2 CGATAGA 20 7.0337974E-4 45.0 12 CGCCCAA 20 7.0337974E-4 45.0 37 TAGTACG 45 3.8562575E-10 45.0 1 AGTCACG 30 2.1658325E-6 44.999996 1 TGTATCG 30 2.1658325E-6 44.999996 1 TAACGAG 30 2.1658325E-6 44.999996 1 GTTCGCG 30 2.1658325E-6 44.999996 1 CGTTATT 665 0.0 43.646614 1 CGTTTTT 9125 0.0 43.569866 1 CTACGAA 80 0.0 42.1875 11 ACGTAAG 75 0.0 42.0 1 AGTACGG 135 0.0 41.666668 2 >>END_MODULE