##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935185.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 277527 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.706215971779322 31.0 31.0 34.0 30.0 34.0 2 31.796574747682207 33.0 31.0 34.0 30.0 34.0 3 31.813441575053957 33.0 31.0 34.0 30.0 34.0 4 35.615968896719956 37.0 35.0 37.0 33.0 37.0 5 32.9395374143777 37.0 35.0 37.0 28.0 37.0 6 34.047184598255306 37.0 35.0 37.0 27.0 37.0 7 35.37469867796647 37.0 35.0 37.0 32.0 37.0 8 35.34051461659586 37.0 35.0 37.0 33.0 37.0 9 37.44201465082676 39.0 37.0 39.0 35.0 39.0 10 36.925362217009514 39.0 37.0 39.0 33.0 39.0 11 36.82155610084784 39.0 37.0 39.0 33.0 39.0 12 37.15198521224962 39.0 37.0 39.0 34.0 39.0 13 37.07385587708583 39.0 37.0 39.0 33.0 39.0 14 38.04606038331406 40.0 37.0 41.0 33.0 41.0 15 38.21012369967607 40.0 37.0 41.0 33.0 41.0 16 38.1787970179478 40.0 37.0 41.0 33.0 41.0 17 38.10784175954051 40.0 37.0 41.0 33.0 41.0 18 37.959758870308114 39.0 37.0 40.0 33.0 41.0 19 37.71217214901613 39.0 37.0 40.0 34.0 41.0 20 37.53702522637437 39.0 35.0 40.0 33.0 41.0 21 37.45300457252808 39.0 35.0 40.0 33.0 41.0 22 37.400083595469994 39.0 35.0 40.0 33.0 41.0 23 37.13378878451466 39.0 35.0 40.0 33.0 41.0 24 36.850854151127635 39.0 35.0 40.0 32.0 41.0 25 36.66731885546271 38.0 35.0 40.0 32.0 41.0 26 36.9245226590566 38.0 35.0 40.0 33.0 41.0 27 36.851733344863746 39.0 35.0 40.0 32.0 41.0 28 36.9230453253197 39.0 35.0 40.0 33.0 41.0 29 36.952318152828376 39.0 35.0 40.0 33.0 41.0 30 36.67428394354423 39.0 35.0 40.0 32.0 41.0 31 36.59950203043307 39.0 35.0 40.0 31.0 41.0 32 36.33875983237667 38.0 35.0 40.0 31.0 41.0 33 36.15632713213489 39.0 35.0 40.0 30.0 41.0 34 36.011894338208535 39.0 35.0 40.0 30.0 41.0 35 35.8212894601246 39.0 35.0 40.0 29.0 41.0 36 35.63076025035402 39.0 35.0 40.0 27.0 41.0 37 35.63251503457321 39.0 35.0 40.0 27.0 41.0 38 35.553034479528115 39.0 35.0 40.0 26.0 41.0 39 35.42436952080338 39.0 35.0 40.0 25.0 41.0 40 35.32942380381008 38.0 35.0 40.0 25.0 41.0 41 35.289510570142724 38.0 35.0 40.0 24.0 41.0 42 35.36897671217575 39.0 35.0 40.0 24.0 41.0 43 35.24696696177309 39.0 35.0 40.0 23.0 41.0 44 35.11902265365172 38.0 35.0 40.0 23.0 41.0 45 35.12371769233264 38.0 35.0 40.0 23.0 41.0 46 35.028357601242405 38.0 35.0 40.0 23.0 41.0 47 34.989092953118075 38.0 35.0 40.0 23.0 41.0 48 34.93458294147957 38.0 35.0 40.0 23.0 41.0 49 34.92575857484137 38.0 35.0 40.0 23.0 41.0 50 34.842573875694974 38.0 35.0 40.0 22.0 41.0 51 33.9541233825898 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 6.0 11 3.0 12 7.0 13 14.0 14 10.0 15 23.0 16 31.0 17 74.0 18 135.0 19 223.0 20 395.0 21 628.0 22 956.0 23 1408.0 24 2110.0 25 3127.0 26 4308.0 27 4867.0 28 4913.0 29 4949.0 30 5197.0 31 6363.0 32 7872.0 33 10415.0 34 16044.0 35 25669.0 36 29984.0 37 37850.0 38 58919.0 39 51011.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.37899735881554 23.97388362213406 23.166394621063898 18.480724397986503 2 35.241255805741424 25.837846407736905 23.981450453469392 14.93944733305228 3 26.901166373001544 25.27609926241411 34.89534351612636 12.927390848457987 4 23.667607115704055 27.427241313457788 33.89544080395781 15.00971076688034 5 18.098058927599837 34.73644005808444 32.183535295664925 14.981965718650796 6 20.784644376943504 34.17000868383977 32.67718095896976 12.368165980246967 7 63.94188673534467 9.965516868628999 21.20586465461018 4.886731741416151 8 61.80551802166996 9.703560374305924 21.187127738922698 7.303793865101414 9 55.922847146403775 13.267898258547817 23.603469212004597 7.205785383043812 10 22.061637246105782 38.80018881045808 28.36372677253024 10.774447170905894 11 19.651421303152485 26.89107726455444 35.912181517473975 17.5453199148191 12 19.530352001787215 23.58689424812721 39.938456438472656 16.944297311612925 13 19.344424146119117 25.42022938308705 41.28607306676467 13.949273404029158 14 14.286898211705529 30.037437798844795 37.92820158038677 17.7474624090629 15 12.92630987255294 28.980603689010437 41.861152248249724 16.2319341901869 16 13.707495126600294 30.263001437697955 37.36645443506398 18.663049000637777 17 13.6563289337614 29.760347641851066 35.671123890648474 20.91219953373906 18 12.490676582818969 29.760347641851066 40.64541468037344 17.103561094956525 19 14.214833151369055 29.735485196034983 38.00098729132661 18.048694361269355 20 14.051966115008629 32.067150223221525 38.399867400288976 15.481016261480866 21 15.22230269487293 30.548739401932064 38.539673617341734 15.689284285853269 22 12.32276499223499 30.165713606243717 35.61995769780958 21.89156370371171 23 12.618592064916207 28.87430772501414 37.68173907403604 20.82536113603361 24 15.24824611659406 28.284455206160118 36.01343292724672 20.4538657499991 25 12.773171619337939 31.44811135493123 33.98047757515485 21.79823945057598 26 11.60031276236186 33.366483261088106 36.33988765057094 18.693316325979094 27 15.776843334162082 29.157163086834792 37.365013133857246 17.700980445145877 28 12.81929325795328 30.090765943493786 36.923254313994676 20.166686484558262 29 15.451109261441228 29.811153509388276 35.07658714287258 19.66115008629791 30 16.529202564074847 31.88158269285511 34.46655640712435 17.122658335945694 31 17.44911305926991 32.60331427212487 30.481358570517465 19.466214098087754 32 17.248051540931154 32.85554198330253 31.57026163220155 18.32614484356477 33 18.52648571130016 30.736468884108575 31.079138246008498 19.65790715858277 34 16.65819902207713 29.55676384640053 31.31983554753231 22.465201583990027 35 16.60451055212646 30.20498906412709 32.01958728339945 21.170913100346993 36 19.17399027842336 32.20803741617932 31.759432415584786 16.858539889812523 37 20.560882364598758 28.299228543529097 33.65510382773568 17.484785264136463 38 20.839053497497538 31.26506610167659 29.598201256094004 18.297679144731863 39 22.972539608758787 28.65991417051314 29.287240520742124 19.080305699985946 40 18.486489602813418 28.99141344806091 32.31757630789077 20.204520641234907 41 16.87835778140505 29.071405665034394 31.528824222508078 22.521412331052474 42 21.239735232968325 27.62938380770159 32.84509254955374 18.285788409776345 43 24.408435935962988 25.30528561185038 32.073275753350124 18.213002698836508 44 20.648801738209254 27.38148000014413 29.802505702147897 22.167212559498715 45 20.325589942600182 25.656242455688993 30.03635682293975 23.981810778771074 46 20.865357244520354 27.70649342226162 32.449815693608194 18.97833363960984 47 18.362177373733008 26.500844962832442 36.1813445178307 18.95563314560385 48 18.461627156997338 25.947385299448346 34.35953979252469 21.23144775102963 49 21.81049051083318 23.581489368601975 35.43727276985663 19.17074735070822 50 19.530352001787215 22.853992584505292 33.9120157678352 23.703639645872293 51 18.420189747303866 22.22918851138808 30.52675955852944 28.823862182778615 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5656.0 1 6032.0 2 6408.0 3 9295.5 4 12183.0 5 7907.0 6 3631.0 7 3601.0 8 3571.0 9 3518.0 10 3465.0 11 3676.0 12 3887.0 13 3810.0 14 3733.0 15 3475.5 16 3218.0 17 2889.0 18 2560.0 19 2409.5 20 2259.0 21 2499.5 22 2740.0 23 2758.0 24 2776.0 25 3666.0 26 4697.0 27 4838.0 28 4844.0 29 4850.0 30 4938.0 31 5026.0 32 5163.0 33 5300.0 34 5493.5 35 5687.0 36 5991.0 37 6295.0 38 6978.5 39 7662.0 40 8426.5 41 9191.0 42 11202.0 43 13213.0 44 15501.5 45 17790.0 46 21946.0 47 26102.0 48 30841.0 49 35580.0 50 33606.0 51 31632.0 52 24203.5 53 16775.0 54 12708.5 55 8642.0 56 6757.0 57 4872.0 58 4339.5 59 3807.0 60 3545.5 61 3284.0 62 2968.0 63 2652.0 64 2118.0 65 1584.0 66 1199.5 67 815.0 68 684.5 69 554.0 70 437.0 71 320.0 72 250.0 73 180.0 74 146.5 75 90.5 76 68.0 77 45.0 78 22.0 79 15.0 80 8.0 81 13.0 82 18.0 83 10.0 84 2.0 85 1.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 277527.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.97955626080028 #Duplication Level Percentage of deduplicated Percentage of total 1 69.08961110241903 26.23992771901135 2 12.585371412504426 9.559736432485586 3 5.368200339094313 6.116456003936388 4 3.005633713053899 4.566105388171544 5 2.0212889423757234 3.838382855314614 6 1.4420891114197747 3.286194272415289 7 1.1211668104922499 2.9806992569782684 8 0.9228428833748742 2.803933056721215 9 0.734487012798653 2.5105941742872218 >10 3.521949717857595 20.884523752930825 >50 0.11560446135476744 3.0719102986974023 >100 0.055809050309198076 3.4920458866168356 >500 0.0069761312886497595 1.8421620778413326 >1k 0.007972721472742582 6.088938020594519 >5k 9.965901840928227E-4 2.718390803997627 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7182 2.587856316682701 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4956 1.7857721951377703 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2078 0.7487559768959416 No Hit GCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCGTCTTCTGC 2075 0.7476750009908946 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCC 1784 0.6428203382013281 No Hit CCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCGTCTTCTGC 1762 0.6348931815643163 TruSeq Adapter, Index 13 (95% over 22bp) CTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCGTCTTCTGCT 1176 0.42374255477845396 TruSeq Adapter, Index 19 (95% over 23bp) GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1145 0.4125724704263009 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1111 0.40032141016910067 No Hit TCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCGTCTTCTGC 964 0.3473535908217939 TruSeq Adapter, Index 13 (95% over 22bp) CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 800 0.28826024134588707 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 698 0.25150706057428646 No Hit ACTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCGTCTTCTGC 687 0.24754348225578052 TruSeq Adapter, Index 19 (95% over 22bp) GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 666 0.239976650920451 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCG 545 0.19637728941688556 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 507 0.1826849279529559 No Hit ACCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCGTCTTCTG 372 0.13404101222583747 TruSeq Adapter, Index 19 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGC 358 0.12899645800228446 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 355 0.12791548209723738 No Hit GCCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCGTCTTCTG 307 0.11061986761648417 TruSeq Adapter, Index 13 (95% over 21bp) AGCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCGTCTTCTG 294 0.10593563869461349 TruSeq Adapter, Index 19 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.603253016823588E-4 0.0 0.0 0.45184792830967796 0.0 2 3.603253016823588E-4 0.0 0.0 2.554706388927924 0.0 3 3.603253016823588E-4 0.0 0.0 3.3892197876242673 0.0 4 3.603253016823588E-4 0.0 0.0 4.475240246894897 0.0 5 3.603253016823588E-4 0.0 0.0 7.2587532023911185 0.0 6 3.603253016823588E-4 0.0 0.0 8.698252782612142 0.0 7 3.603253016823588E-4 0.0 0.0 10.231076615968897 0.0 8 3.603253016823588E-4 0.0 0.0 12.608502956469101 0.0 9 3.603253016823588E-4 0.0 0.0 13.434008222623385 0.0 10 3.603253016823588E-4 0.0 0.0 15.866204008979306 0.0 11 3.603253016823588E-4 0.0 0.0 19.762761821372337 0.0 12 3.603253016823588E-4 0.0 0.0 22.698692379480196 0.0 13 3.603253016823588E-4 0.0 0.0 23.83768065809813 0.0 14 3.603253016823588E-4 0.0 0.0 24.255297682747983 0.0 15 3.603253016823588E-4 0.0 0.0 25.112151250148635 0.0 16 3.603253016823588E-4 0.0 0.0 26.905850601923415 0.0 17 3.603253016823588E-4 0.0 0.0 29.073567616844485 0.0 18 3.603253016823588E-4 0.0 0.0 31.30866546318016 0.0 19 3.603253016823588E-4 0.0 0.0 32.682585838494994 0.0 20 3.603253016823588E-4 0.0 0.0 34.30260839485888 0.0 21 3.603253016823588E-4 0.0 0.0 35.94569177053044 0.0 22 3.603253016823588E-4 0.0 0.0 37.60751206188947 0.0 23 3.603253016823588E-4 0.0 0.0 39.096736533742664 0.0 24 3.603253016823588E-4 0.0 0.0 40.053039884407646 0.0 25 3.603253016823588E-4 0.0 0.0 40.86701474090809 0.0 26 3.603253016823588E-4 0.0 0.0 41.51740191044475 0.0 27 3.603253016823588E-4 0.0 0.0 42.05500726055483 0.0 28 3.603253016823588E-4 0.0 0.0 42.652066285442494 0.0 29 3.603253016823588E-4 0.0 0.0 43.211651478955204 0.0 30 3.603253016823588E-4 0.0 0.0 43.83069034724549 0.0 31 3.603253016823588E-4 0.0 0.0 44.347036504556314 3.603253016823588E-4 32 3.603253016823588E-4 0.0 0.0 44.77186003523981 3.603253016823588E-4 33 3.603253016823588E-4 0.0 0.0 45.170740144202185 3.603253016823588E-4 34 3.603253016823588E-4 0.0 0.0 45.564936024242684 3.603253016823588E-4 35 3.603253016823588E-4 0.0 0.0 45.94688084402598 3.603253016823588E-4 36 3.603253016823588E-4 0.0 0.0 46.380712507251545 3.603253016823588E-4 37 3.603253016823588E-4 0.0 0.0 46.78103391742065 3.603253016823588E-4 38 3.603253016823588E-4 0.0 0.0 47.13415271306936 3.603253016823588E-4 39 3.603253016823588E-4 0.0 0.0 47.47321882195246 3.603253016823588E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 25 3.8831335E-5 45.000004 6 CCCTCGT 25 3.8831335E-5 45.000004 14 ATATGAG 25 3.8831335E-5 45.000004 37 AATATGG 35 1.2074815E-7 45.000004 2 CGGGACG 25 3.8831335E-5 45.000004 6 CAAGCGG 35 1.2074815E-7 45.000004 2 TTAAACG 25 3.8831335E-5 45.000004 37 TTACGCG 35 1.2074815E-7 45.000004 1 ACGTAAG 25 3.8831335E-5 45.000004 1 AGTCGTG 25 3.8831335E-5 45.000004 1 ATCGAGG 25 3.8831335E-5 45.000004 2 TCACGAC 20 7.0240296E-4 45.0 25 TATCAGG 20 7.0240296E-4 45.0 2 ATGGGCG 20 7.0240296E-4 45.0 5 CGTGGGT 20 7.0240296E-4 45.0 4 CTCACGA 20 7.0240296E-4 45.0 24 CAAACGG 20 7.0240296E-4 45.0 2 TTGTGCG 20 7.0240296E-4 45.0 1 GATCGAC 20 7.0240296E-4 45.0 10 CGCGGGT 20 7.0240296E-4 45.0 4 >>END_MODULE