##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935179.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 844138 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72101481037461 31.0 31.0 34.0 30.0 34.0 2 31.828199891486936 33.0 31.0 34.0 30.0 34.0 3 31.79303384043841 33.0 31.0 34.0 30.0 34.0 4 35.58402299150139 37.0 35.0 37.0 33.0 37.0 5 33.173799781552304 37.0 35.0 37.0 28.0 37.0 6 34.1521966787421 37.0 35.0 37.0 28.0 37.0 7 35.44127263551694 37.0 35.0 37.0 32.0 37.0 8 35.41706213912891 37.0 35.0 37.0 33.0 37.0 9 37.472259275142214 39.0 37.0 39.0 35.0 39.0 10 36.91846830731468 39.0 37.0 39.0 32.0 39.0 11 36.846289350793356 39.0 37.0 39.0 33.0 39.0 12 37.07918965856294 39.0 37.0 39.0 33.0 39.0 13 37.022698895204336 39.0 37.0 39.0 33.0 39.0 14 37.88882031137089 40.0 37.0 41.0 33.0 41.0 15 38.05692552639497 40.0 37.0 41.0 33.0 41.0 16 38.07783087599421 40.0 37.0 41.0 33.0 41.0 17 38.03574060165518 40.0 37.0 41.0 33.0 41.0 18 37.88100997704167 39.0 37.0 40.0 33.0 41.0 19 37.6238150634138 39.0 37.0 40.0 33.0 41.0 20 37.38589661879929 39.0 35.0 40.0 33.0 41.0 21 37.28248106352279 39.0 35.0 40.0 33.0 41.0 22 37.279966071898194 39.0 35.0 40.0 33.0 41.0 23 37.02547213844182 39.0 35.0 40.0 32.0 41.0 24 36.726932089302935 38.0 35.0 40.0 32.0 41.0 25 36.54062724341281 38.0 35.0 40.0 31.0 41.0 26 36.822189025964946 38.0 35.0 40.0 32.0 41.0 27 36.768864806465295 39.0 35.0 40.0 32.0 41.0 28 36.81199993366014 39.0 35.0 40.0 32.0 41.0 29 36.85671655582381 39.0 35.0 40.0 32.0 41.0 30 36.569005304819825 39.0 35.0 40.0 31.0 41.0 31 36.366505239664605 39.0 35.0 40.0 31.0 41.0 32 36.11079823441191 39.0 35.0 40.0 30.0 41.0 33 35.86735581149054 39.0 35.0 40.0 29.0 41.0 34 35.668666734586054 39.0 35.0 40.0 26.0 41.0 35 35.46196474983948 39.0 35.0 40.0 25.0 41.0 36 35.28560614496682 39.0 35.0 40.0 24.0 41.0 37 35.2449101924093 39.0 35.0 40.0 23.0 41.0 38 35.18326268927592 39.0 35.0 40.0 23.0 41.0 39 35.04075755385968 39.0 35.0 40.0 23.0 41.0 40 34.90985715605742 38.0 35.0 40.0 22.0 41.0 41 34.76477068915272 38.0 35.0 40.0 21.0 41.0 42 34.82844866597642 38.0 35.0 40.0 21.0 41.0 43 34.77655075354978 38.0 35.0 40.0 21.0 41.0 44 34.727447407888285 38.0 35.0 40.0 20.0 41.0 45 34.71646223721714 38.0 35.0 40.0 20.0 41.0 46 34.613779974364384 38.0 35.0 40.0 20.0 41.0 47 34.510666502396525 38.0 34.0 40.0 20.0 41.0 48 34.45467328801689 38.0 34.0 40.0 20.0 41.0 49 34.441889833178934 38.0 34.0 40.0 20.0 41.0 50 34.352832119866655 38.0 34.0 40.0 19.0 41.0 51 33.4457884848212 37.0 33.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 15.0 10 31.0 11 22.0 12 23.0 13 42.0 14 74.0 15 105.0 16 161.0 17 289.0 18 502.0 19 879.0 20 1454.0 21 2287.0 22 3613.0 23 5526.0 24 8193.0 25 12141.0 26 15848.0 27 17455.0 28 16746.0 29 16120.0 30 17570.0 31 20019.0 32 24814.0 33 33371.0 34 48904.0 35 65111.0 36 84243.0 37 109131.0 38 174349.0 39 165036.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.48402512385415 21.924614221845243 23.086391087713146 22.504969566587455 2 40.20408985260704 20.702539158289284 24.75507559190559 14.33829539719809 3 26.95767753613746 21.502052981858416 38.50650012201796 13.033769359986163 4 24.082673686056072 23.586783203694182 37.254809047809715 15.075734062440027 5 18.300799158431442 31.164928009401304 34.82262378900132 15.711649043165929 6 20.590946030151468 31.07264452020878 35.63978875491922 12.696620694720531 7 66.10648969718221 6.5490476675614655 22.596779199609543 4.7476834356467785 8 64.98262132494924 6.022001141993371 22.90561495869159 6.089762574365802 9 58.93029338804793 9.30049352120151 25.28378061407021 6.485432476680353 10 23.314078977607927 35.11309762147895 29.863718965382436 11.709104435530683 11 20.868507281984698 22.236530046035128 38.67092821315946 18.224034458820714 12 21.054614292923667 20.062714864157282 41.42308485105516 17.45958599186389 13 21.220463952576473 20.24017399998578 43.402026682840955 15.137335364596785 14 15.504100040514704 23.41193027680308 42.81823588086308 18.265733801819135 15 13.18007245260846 24.04275130369679 44.726810071339045 18.050366172355705 16 15.827388412795065 25.321689107705136 40.117966493630185 18.73295598586961 17 15.800141682994962 24.53804946584563 39.57587503465073 20.085933816508675 18 15.361706261298508 23.673380418841468 43.23499238276206 17.729920937097962 19 15.25864254422855 25.49618664246841 41.29123437163118 17.953936441671857 20 14.9380788449282 27.899348210837566 40.80884879012673 16.353724154107503 21 15.028940765609414 26.13672172085607 42.5892448864996 16.245092627034914 22 13.791228448429049 23.76898090122705 40.81465352821458 21.62513712212932 23 12.930824106958816 24.3576287289519 41.873129748927305 20.838417415161974 24 14.746759416114427 24.38155846555895 39.931148698435564 20.94053341989106 25 13.95624885978359 26.453968426963364 37.712198716323634 21.877583996929413 26 12.750047977937257 26.420206174819754 39.27296247769914 21.55678336954384 27 13.913009484231251 24.679140140593127 41.60303173177846 19.80481864339717 28 11.63873679422085 24.046542153060283 41.51098517067114 22.80373588204772 29 15.130819842253281 23.509781575998236 39.003575244805944 22.35582333694254 30 18.1772411619901 23.983400818349608 38.953228026697055 18.886129992963234 31 15.40861802217173 26.515451265077512 37.93183105132099 20.144099661429767 32 17.310084370091147 25.777894135792963 34.6837839310634 22.228237563052485 33 18.618401256666566 24.65627658036956 35.424421125455794 21.300901037508087 34 15.990750327553076 22.814279181839936 37.53118565921686 23.663784831390128 35 16.446126107342636 23.88128481362052 34.07997270588458 25.592616373152254 36 16.920693062034882 25.82445050453836 36.748849121826055 20.50600731160071 37 16.874018229246875 25.335194008562585 38.962942078191006 18.827845683999538 38 20.487526920953684 25.08985497631904 33.9286941234727 20.49392397925458 39 22.589908285138215 23.215635358199727 33.79838367660264 20.396072680059422 40 20.687375760835312 21.82901373945966 35.798056715845036 21.685553783859984 41 16.003781372240084 24.881950581539986 33.888653277070816 25.225614769149118 42 16.9610893005646 25.272763458107562 35.18536068747053 22.58078655385731 43 18.80486365973336 23.566051996237583 36.48408198659461 21.145002357434446 44 20.061767151816408 22.058952446164014 34.019200652026086 23.860079749993485 45 21.253752348549646 19.620962449267772 34.48808133267309 24.637203869509488 46 20.991472958212995 21.424695962034644 36.00750114317801 21.57632993657435 47 16.006387581177485 23.926775005982435 39.22877538980593 20.838062023034148 48 17.238176696227395 23.448772594054525 37.105544354122195 22.207506355595886 49 20.879405973904742 20.880709078373442 37.334772276570895 20.905112671150924 50 19.244720649941126 19.69938564547503 36.20557302242051 24.850320682163343 51 17.806567172666078 19.941644612610734 33.41361246620813 28.838175748515056 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5448.0 1 8169.5 2 10891.0 3 29219.5 4 47548.0 5 29424.0 6 11300.0 7 10958.5 8 10617.0 9 10722.5 10 10828.0 11 10813.5 12 10799.0 13 10596.5 14 10394.0 15 9939.5 16 9485.0 17 9132.0 18 8779.0 19 8206.5 20 7634.0 21 7706.5 22 7779.0 23 8161.5 24 8544.0 25 9196.5 26 10186.0 27 10523.0 28 11069.5 29 11616.0 30 12649.5 31 13683.0 32 14424.5 33 15166.0 34 16880.5 35 18595.0 36 19854.5 37 21114.0 38 21686.0 39 22258.0 40 25235.5 41 28213.0 42 34047.0 43 39881.0 44 45457.0 45 51033.0 46 62572.0 47 74111.0 48 87785.0 49 101459.0 50 98742.5 51 96026.0 52 77155.5 53 58285.0 54 45711.5 55 33138.0 56 27598.0 57 22058.0 58 19727.5 59 17397.0 60 14729.5 61 12062.0 62 10685.0 63 9308.0 64 7969.0 65 6630.0 66 5310.5 67 3991.0 68 3348.0 69 2705.0 70 2424.0 71 2143.0 72 1752.0 73 1361.0 74 1102.0 75 601.0 76 359.0 77 259.0 78 159.0 79 118.0 80 77.0 81 50.0 82 23.0 83 21.5 84 20.0 85 11.5 86 3.0 87 2.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 844138.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.36565962092511 #Duplication Level Percentage of deduplicated Percentage of total 1 71.55878796882288 28.885176780354556 2 11.090707580354223 8.953674542875852 3 4.941084607090055 5.98350418223969 4 2.847291066433727 4.597311281174588 5 1.9172390080282167 3.869530860501355 6 1.4301519157174596 3.463741526163897 7 1.0986770997247268 3.1044178088555463 8 0.8998374045601746 2.9058024309322157 9 0.7156252752651473 2.5998017649735394 >10 3.3442044167054927 20.97398703051229 >50 0.09782159395509311 2.7289430040747478 >100 0.05162795274047451 3.747415455908508 >500 0.002415342818227725 0.767666264156272 >1k 0.003924932079620054 2.9873052019365836 >5k 3.0191785227846565E-4 0.6427483532561008 >10k+ 3.0191785227846565E-4 3.788973512084219 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31090 3.6830470847183756 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCC 5274 0.6247793607206404 No Hit CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 3423 0.40550241785110963 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3238 0.38358656996841745 No Hit GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 2794 0.3309885350499563 No Hit CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT 2445 0.28964458417936406 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1757 0.208141322864271 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCG 1692 0.20044116009467647 No Hit TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 1613 0.19108250072855387 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1497 0.17734067178589283 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1493 0.17686681561545622 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1377 0.1631249866727952 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGC 1095 0.1297181266570158 No Hit ACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 1064 0.12604574133613225 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTC 1024 0.12130717963176638 No Hit AGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 979 0.11597629771435476 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGT 964 0.11419933707521755 No Hit CGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG 962 0.11396240898999928 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 935 0.11076387983955231 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.30540030184638056 0.0 2 0.0 0.0 0.0 1.4248855045028184 0.0 3 0.0 0.0 0.0 1.9827326811492907 0.0 4 0.0 0.0 0.0 2.7459965076800237 0.0 5 0.0 0.0 0.0 4.815444868019211 0.0 6 0.0 0.0 0.0 6.1968540688844715 0.0 7 0.0 0.0 0.0 7.529693012279982 0.0 8 0.0 0.0 0.0 9.59084888963653 0.0 9 0.0 0.0 0.0 10.434312873013655 0.0 10 0.0 0.0 0.0 12.806673790304428 0.0 11 0.0 0.0 0.0 16.585202893365775 0.0 12 0.0 0.0 0.0 19.34659972658499 0.0 13 0.0 0.0 0.0 20.399745065380305 0.0 14 0.0 0.0 0.0 20.862110223683807 0.0 15 1.1846404260914685E-4 0.0 0.0 21.662097903423373 0.0 16 1.1846404260914685E-4 0.0 0.0 23.26752260886253 0.0 17 1.1846404260914685E-4 0.0 0.0 25.215426861484733 0.0 18 2.369280852182937E-4 0.0 0.0 27.194842549440967 0.0 19 2.369280852182937E-4 0.0 0.0 28.446533623649213 0.0 20 2.369280852182937E-4 0.0 0.0 29.933020430308787 0.0 21 2.369280852182937E-4 0.0 0.0 31.594360163859463 0.0 22 2.369280852182937E-4 0.0 0.0 33.26268927592408 0.0 23 2.369280852182937E-4 0.0 0.0 34.61543017847793 0.0 24 2.369280852182937E-4 0.0 0.0 35.4931302701691 0.0 25 2.369280852182937E-4 0.0 0.0 36.2274888703032 0.0 26 2.369280852182937E-4 0.0 0.0 36.84800352548991 0.0 27 2.369280852182937E-4 0.0 0.0 37.45347324726526 0.0 28 2.369280852182937E-4 0.0 0.0 38.01072810369868 0.0 29 2.369280852182937E-4 0.0 0.0 38.551871850337264 0.0 30 2.369280852182937E-4 0.0 0.0 39.142296638701254 0.0 31 2.369280852182937E-4 0.0 0.0 39.60501718913258 0.0 32 2.369280852182937E-4 0.0 0.0 40.0442818591273 0.0 33 2.369280852182937E-4 0.0 0.0 40.42964538973485 0.0 34 2.369280852182937E-4 0.0 0.0 40.84687574780427 0.0 35 3.5539212782744053E-4 0.0 0.0 41.22856689309094 0.0 36 3.5539212782744053E-4 0.0 0.0 41.58869758262275 0.0 37 3.5539212782744053E-4 0.0 0.0 41.93449412299885 0.0 38 3.5539212782744053E-4 0.0 0.0 42.32649163999251 0.0 39 3.5539212782744053E-4 0.0 0.0 42.917508748569546 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATAG 35 1.2114106E-7 45.000004 1 ATGACCG 20 7.0322194E-4 45.000004 1 CGGTCTA 120 0.0 45.000004 31 TCGAACG 20 7.0322194E-4 45.000004 1 ACGACAG 35 1.2114106E-7 45.000004 1 CGAACCA 25 3.8899227E-5 45.0 15 CGCATCG 25 3.8899227E-5 45.0 21 TTATGCG 45 3.8380676E-10 45.0 1 CGTTATT 765 0.0 44.117645 1 CGACGGT 130 0.0 43.269234 28 CGTTTTT 9070 0.0 42.81698 1 CTCACGA 140 0.0 41.785717 24 AACGAGC 110 0.0 40.909092 15 CACAACG 110 0.0 40.909092 12 TCACGAC 145 0.0 40.34483 25 CACGACG 145 0.0 40.34483 26 ACGGTCT 135 0.0 40.000004 30 CGGGTAT 45 1.9272193E-8 40.0 6 TATTGCG 45 1.9272193E-8 40.0 1 CGTACGG 45 1.9272193E-8 40.0 2 >>END_MODULE