##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935176.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 912253 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.587836926817452 31.0 31.0 34.0 30.0 34.0 2 31.6787809960614 31.0 31.0 34.0 30.0 34.0 3 31.70521116400823 31.0 31.0 34.0 30.0 34.0 4 35.52760034771056 37.0 35.0 37.0 33.0 37.0 5 32.942998269120515 37.0 35.0 37.0 28.0 37.0 6 33.96598421709767 36.0 35.0 37.0 27.0 37.0 7 35.335558227816186 37.0 35.0 37.0 32.0 37.0 8 35.2152615557307 37.0 35.0 37.0 32.0 37.0 9 37.2489945223529 39.0 37.0 39.0 34.0 39.0 10 36.71237584310493 39.0 35.0 39.0 32.0 39.0 11 36.65508691119678 39.0 37.0 39.0 32.0 39.0 12 36.95905741060868 39.0 37.0 39.0 33.0 39.0 13 36.85938878797877 39.0 37.0 39.0 33.0 39.0 14 37.724111622543305 39.0 37.0 41.0 32.0 41.0 15 37.83644668748691 40.0 37.0 41.0 33.0 41.0 16 37.89500938884279 40.0 37.0 41.0 33.0 41.0 17 37.82512088203602 39.0 37.0 41.0 33.0 41.0 18 37.77002761295386 39.0 37.0 40.0 33.0 41.0 19 37.612896860848906 39.0 37.0 40.0 33.0 41.0 20 37.31479205878194 39.0 35.0 40.0 32.0 41.0 21 37.32164870929446 39.0 35.0 40.0 32.0 41.0 22 37.37242957819815 39.0 35.0 40.0 33.0 41.0 23 37.02387495574145 39.0 35.0 40.0 32.0 41.0 24 36.77653019502265 39.0 35.0 40.0 31.0 41.0 25 36.60106680931715 38.0 35.0 40.0 31.0 41.0 26 36.93082949576488 39.0 35.0 40.0 32.0 41.0 27 36.802969132466544 39.0 35.0 40.0 32.0 41.0 28 36.918898595016955 39.0 35.0 40.0 32.0 41.0 29 37.039050570400974 39.0 35.0 40.0 32.0 41.0 30 36.73905265315653 39.0 35.0 40.0 31.0 41.0 31 36.584518768367985 39.0 35.0 40.0 31.0 41.0 32 36.35568203119091 39.0 35.0 40.0 30.0 41.0 33 36.19904127473409 39.0 35.0 40.0 30.0 41.0 34 35.927042169222794 39.0 35.0 40.0 28.0 41.0 35 35.83299698658157 39.0 35.0 40.0 27.0 41.0 36 35.70930980769589 39.0 35.0 40.0 26.0 41.0 37 35.66446259973932 39.0 35.0 40.0 25.0 41.0 38 35.653886586286916 39.0 35.0 40.0 25.0 41.0 39 35.4647822479071 39.0 35.0 40.0 24.0 41.0 40 35.30595130955996 39.0 35.0 40.0 24.0 41.0 41 35.12056304555863 39.0 35.0 40.0 23.0 41.0 42 35.386089166053715 39.0 35.0 40.0 24.0 41.0 43 35.394228355511025 39.0 35.0 40.0 24.0 41.0 44 35.33509234828496 39.0 35.0 40.0 23.0 41.0 45 35.31691427707007 39.0 35.0 40.0 23.0 41.0 46 35.14647033224336 39.0 35.0 40.0 23.0 41.0 47 35.02657267227403 39.0 35.0 40.0 23.0 41.0 48 35.02500950942337 39.0 35.0 40.0 23.0 41.0 49 35.08235653924953 39.0 35.0 40.0 23.0 41.0 50 34.96920152633096 39.0 35.0 40.0 23.0 41.0 51 33.992522907570596 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 13.0 10 22.0 11 21.0 12 23.0 13 27.0 14 35.0 15 66.0 16 111.0 17 224.0 18 404.0 19 737.0 20 1578.0 21 2839.0 22 4541.0 23 6194.0 24 8311.0 25 11097.0 26 14145.0 27 15356.0 28 15461.0 29 16166.0 30 17900.0 31 21629.0 32 27363.0 33 36761.0 34 52435.0 35 68744.0 36 91267.0 37 126813.0 38 198573.0 39 173349.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.76544555074086 20.477762199740642 21.895241780514834 16.861550469003664 2 34.7133963933251 28.546357205731304 22.854405521275346 13.88584087966825 3 25.73935081605651 28.338848981587343 32.989313271647234 12.932486930708913 4 22.733824936722595 22.802336632491205 39.06065532259143 15.403183108194765 5 22.541553713717576 30.321961122627165 31.02856334810628 16.107921815548977 6 20.57104772469918 34.934058863056634 32.28161485903582 12.213278553208376 7 65.92403642410603 5.605024044864747 23.647496911492755 4.823442619536467 8 63.04829910123617 9.655435498704854 20.106373999318173 7.189891400740803 9 57.39811214652075 8.323458514249884 21.644872639498033 12.633556699731324 10 25.660973436097223 33.13981976491171 27.739125001507258 13.460081797483811 11 22.101434580100037 22.519410733645163 36.152032385752634 19.227122300502163 12 20.97203297769369 18.979932102169027 39.41560071602944 20.632434204107852 13 21.760849238095133 20.72034841211813 43.327454116347106 14.191348233439626 14 16.227406212969427 26.21016318937838 38.174716882268406 19.387713715383782 15 12.845340053691245 24.16796656190772 43.96258494080041 19.024108443600625 16 14.852020218075468 26.212026707503288 35.81363941801233 23.122313656408913 17 14.914174028476749 26.249406688714643 37.38151587333777 21.454903409470838 18 14.610968667683197 24.486957017406354 40.66163662931226 20.240437685598184 19 14.423739905486746 26.51128579462057 37.27200677882123 21.792967521071457 20 14.953636765239468 28.038822563477456 40.31502225807972 16.692518413203356 21 14.962515881011079 28.549865004554658 39.48060461297469 17.007014501459572 22 13.190200525512111 23.34626468753734 38.55761504758 24.905919739370546 23 13.578360389058735 25.859602544469574 39.05879180446652 21.503245262005166 24 16.467251957516172 24.106908938638732 35.756747305846076 23.66909179799902 25 12.922621246518235 30.326674727296044 33.69745015911156 23.053253867074154 26 12.765208774320284 25.34143488703243 37.59209342145216 24.30126291719512 27 16.179941310140936 24.757824857797125 37.59044914075372 21.471784691308223 28 10.677191524719568 24.496274608030884 39.59899282326285 25.2275410439867 29 14.751499858043765 21.358219704402178 36.320516347986796 27.569764089567254 30 16.870210347348817 25.734856448814092 37.48806526259711 19.906867941239987 31 14.243965215789917 27.33770127365983 34.27393497198693 24.144398538563316 32 16.38712067814521 25.857629407631432 32.292138255505876 25.463111658717487 33 18.256119738712833 23.18205585511914 32.01337786776256 26.54844653840546 34 14.845223857855222 24.85571436871131 32.949631297458055 27.349430475975417 35 14.136538876824742 23.0806585453816 34.47453721719742 28.30826536059624 36 15.786410129646052 23.65001814189704 34.95313251915861 25.610439209298296 37 13.41656316833159 24.05900556095732 38.91332777201061 23.61110349870047 38 17.579553040658677 22.899678049839245 33.07810442936335 26.442664480138735 39 20.68099529406864 23.459171962164007 29.503218953513993 26.356613790253363 40 20.046083707041795 22.923465310610105 34.90237905493323 22.128071927414872 41 15.614089512448851 25.66809865245716 31.422094528601168 27.29571730649283 42 16.13181869503307 20.42185665599346 38.0609326579359 25.385391991037576 43 18.75170594122464 19.477381822805732 33.50649436066529 28.264417875304325 44 19.04449752426136 19.835067684074485 32.47311875104823 28.647316040615927 45 19.526052531479753 18.116246260631645 32.52891467608218 29.82878653180642 46 22.05309272756571 21.646078445343562 33.125898188331526 23.174930638759204 47 14.576658010442278 21.68565080081951 40.80929303603277 22.928398152705444 48 16.923813898118176 21.379047259915833 35.39171699079093 26.30542185117506 49 18.87623279945366 18.091582050154948 38.56309598324149 24.469089167149903 50 19.048005323084716 17.590843768121346 34.980427578752824 28.380723330041118 51 17.919151814244515 17.933621484390844 31.42143681632179 32.72578988504286 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3824.0 1 5970.5 2 8117.0 3 19420.5 4 30724.0 5 19603.5 6 8483.0 7 8349.5 8 8216.0 9 8150.0 10 8084.0 11 8183.0 12 8282.0 13 8077.0 14 7872.0 15 7515.0 16 7158.0 17 7204.0 18 7250.0 19 6996.5 20 6743.0 21 7174.5 22 7606.0 23 7646.5 24 7687.0 25 8406.0 26 9808.0 27 10491.0 28 11301.5 29 12112.0 30 12988.0 31 13864.0 32 14971.0 33 16078.0 34 17385.5 35 18693.0 36 20298.0 37 21903.0 38 23702.0 39 25501.0 40 28891.0 41 32281.0 42 38845.0 43 45409.0 44 54589.5 45 63770.0 46 96542.0 47 129314.0 48 125034.0 49 120754.0 50 114732.0 51 108710.0 52 85223.0 53 61736.0 54 48111.5 55 34487.0 56 27684.5 57 20882.0 58 18046.0 59 15210.0 60 13392.0 61 11574.0 62 9632.5 63 7691.0 64 6418.5 65 5146.0 66 3998.5 67 2851.0 68 2423.0 69 1995.0 70 1546.5 71 1098.0 72 868.5 73 639.0 74 531.0 75 328.0 76 233.0 77 180.0 78 127.0 79 96.0 80 65.0 81 46.5 82 28.0 83 18.5 84 9.0 85 6.5 86 4.0 87 2.5 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 912253.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.822440681200646 #Duplication Level Percentage of deduplicated Percentage of total 1 70.52369429011533 26.67378243907016 2 11.573715105279167 8.754923060610743 3 5.056743761666215 5.737751728969555 4 2.9269651746681773 4.4281986677930885 5 1.9927969483064252 3.768622218349872 6 1.438599725010445 3.264681165791947 7 1.1389229302416113 3.0153791478665792 8 0.9217252504001126 2.7889518886098457 9 0.7355539813065324 2.503840214320856 >10 3.5241125840139476 20.71217894921957 >50 0.104256833698281 2.731150636711942 >100 0.05182867069460117 3.85598616090959 >500 0.004793403069922254 1.2742997462566417 >1k 0.004793403069922254 3.984481262437182 >5k 5.991753837402817E-4 1.7270920089315074 >10k+ 8.987630756104226E-4 4.778680704150929 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19071 2.090538480004999 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTC 11591 1.2705905050462973 RNA PCR Primer, Index 21 (95% over 23bp) GAATGATACCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCG 11511 1.2618210079879157 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGC 8294 0.9091776075277364 No Hit GCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGC 6948 0.761630819520462 TruSeq Adapter, Index 21 (96% over 25bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCC 4736 0.5191542258562044 No Hit CCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGC 3533 0.38728291384078756 RNA PCR Primer, Index 21 (96% over 26bp) CTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGCT 2775 0.3041919292126197 RNA PCR Primer, Index 21 (96% over 27bp) GAACTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCT 2680 0.29377815145579134 RNA PCR Primer, Index 14 (95% over 23bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2641 0.2895030216398302 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCT 2632 0.2885164532207622 RNA PCR Primer, Index 21 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTCGATCT 2402 0.2633041491779145 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTC 2066 0.22647226153271077 No Hit TCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGC 1980 0.21704505219495032 TruSeq Adapter, Index 21 (96% over 25bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTCGATCTCGTA 1783 0.19545016568868503 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCG 1603 0.17571879730732592 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1382 0.15149306168354612 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1380 0.15127382425708658 No Hit ACTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGC 1334 0.146231363448517 RNA PCR Primer, Index 14 (96% over 25bp) GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1161 0.12726732605976632 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGC 1076 0.11794973543523561 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTC 964 0.10567243955350106 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 961 0.10534358341381174 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0961871322977288E-4 0.0 0.0 0.3262252905718041 0.0 2 1.0961871322977288E-4 0.0 0.0 1.955268987879459 0.0 3 1.0961871322977288E-4 0.0 0.0 2.5814110778479216 0.0 4 1.0961871322977288E-4 0.0 0.0 3.7691298356925107 0.0 5 1.0961871322977288E-4 0.0 0.0 7.482682983777527 0.0 6 1.0961871322977288E-4 0.0 0.0 9.026004847339498 0.0 7 1.0961871322977288E-4 0.0 0.0 10.75863822864929 0.0 8 1.0961871322977288E-4 0.0 0.0 13.144051047242376 0.0 9 1.0961871322977288E-4 0.0 0.0 13.896035419998618 0.0 10 1.0961871322977288E-4 0.0 0.0 17.696516207674843 0.0 11 1.0961871322977288E-4 0.0 0.0 21.485596649175175 0.0 12 1.0961871322977288E-4 0.0 0.0 25.365331766516526 0.0 13 1.0961871322977288E-4 0.0 0.0 26.510628082341192 0.0 14 1.0961871322977288E-4 0.0 0.0 27.00007563691213 0.0 15 1.0961871322977288E-4 0.0 0.0 28.130025332884628 0.0 16 1.0961871322977288E-4 0.0 0.0 29.960109750255686 0.0 17 1.0961871322977288E-4 0.0 0.0 32.167063303710705 0.0 18 1.0961871322977288E-4 0.0 0.0 34.3069302046691 0.0 19 2.1923742645954577E-4 0.0 0.0 36.07957441630776 0.0 20 2.1923742645954577E-4 0.0 0.0 37.8249235683522 0.0 21 2.1923742645954577E-4 0.0 0.0 39.67375278568555 0.0 22 2.1923742645954577E-4 0.0 0.0 41.66497671150437 0.0 23 2.1923742645954577E-4 0.0 0.0 43.23910143348391 0.0 24 2.1923742645954577E-4 0.0 0.0 44.27379246765974 0.0 25 2.1923742645954577E-4 0.0 0.0 45.11676037239669 0.0 26 2.1923742645954577E-4 0.0 0.0 45.843532441110085 0.0 27 2.1923742645954577E-4 0.0 0.0 46.543996018648336 0.0 28 2.1923742645954577E-4 0.0 0.0 47.1701381086168 0.0 29 2.1923742645954577E-4 0.0 0.0 47.77698730505682 0.0 30 3.2885613968931864E-4 0.0 0.0 48.41222774822335 0.0 31 5.480935661488644E-4 0.0 0.0 48.92173552731534 0.0 32 5.480935661488644E-4 0.0 0.0 49.37139148898387 0.0 33 5.480935661488644E-4 0.0 0.0 49.798137139587375 0.0 34 5.480935661488644E-4 0.0 0.0 50.19988972357449 0.0 35 6.577122793786373E-4 0.0 0.0 50.61589274028148 0.0 36 6.577122793786373E-4 0.0 0.0 50.974126695116375 0.0 37 6.577122793786373E-4 0.0 0.0 51.33455302421587 0.0 38 6.577122793786373E-4 0.0 0.0 51.73137276610765 0.0 39 7.673309926084102E-4 0.0 0.0 52.201088952297226 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATGCG 25 3.89017E-5 45.000004 1 CGACAGG 25 3.89017E-5 45.000004 2 ACAATCG 25 3.89017E-5 45.000004 4 GTCAACG 25 3.89017E-5 45.000004 1 GTCGGGC 25 3.89017E-5 45.000004 4 AAATGCG 25 3.89017E-5 45.000004 1 CGACGAA 20 7.032521E-4 45.0 19 TAGAACG 20 7.032521E-4 45.0 1 ACGGGTC 35 1.2115561E-7 45.0 5 TCAGGCG 20 7.032521E-4 45.0 1 TTACGAG 35 1.2115561E-7 45.0 1 CGTTTTT 6870 0.0 43.82096 1 CGTTATT 410 0.0 43.353657 1 CCGATGA 755 0.0 42.615894 18 CGATGAA 780 0.0 42.115383 19 CGACGGT 70 0.0 41.785713 28 CGGTCTA 70 0.0 41.785713 31 GCGTAAG 70 0.0 41.785713 1 ACGGGTG 60 3.6379788E-12 41.250004 5 TACGGCT 995 0.0 40.703518 7 >>END_MODULE