##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935175.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 417152 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.730724052623504 31.0 31.0 34.0 30.0 34.0 2 31.83912818349187 33.0 31.0 34.0 30.0 34.0 3 31.826801741331696 33.0 31.0 34.0 30.0 34.0 4 35.627910210187174 37.0 35.0 37.0 33.0 37.0 5 33.04381856014115 37.0 35.0 37.0 28.0 37.0 6 34.10497132939552 37.0 35.0 37.0 28.0 37.0 7 35.42712967934949 37.0 35.0 37.0 32.0 37.0 8 35.40666471693771 37.0 35.0 37.0 33.0 37.0 9 37.49788566277999 39.0 37.0 39.0 35.0 39.0 10 36.96882910785517 39.0 37.0 39.0 33.0 39.0 11 36.808861038662165 39.0 37.0 39.0 32.0 39.0 12 37.18136794262043 39.0 37.0 39.0 34.0 39.0 13 37.13202381865603 39.0 37.0 39.0 33.0 39.0 14 38.14643822875115 40.0 37.0 41.0 33.0 41.0 15 38.27975174516723 40.0 38.0 41.0 34.0 41.0 16 38.23679857701749 40.0 38.0 41.0 33.0 41.0 17 38.180490564590364 40.0 37.0 41.0 33.0 41.0 18 38.05871001457502 39.0 37.0 41.0 34.0 41.0 19 37.85732299018104 39.0 37.0 41.0 34.0 41.0 20 37.64443656029457 39.0 35.0 41.0 33.0 41.0 21 37.58138759972384 39.0 35.0 40.0 33.0 41.0 22 37.5268894791347 39.0 35.0 40.0 33.0 41.0 23 37.287784788278614 39.0 35.0 40.0 33.0 41.0 24 37.02420220926665 39.0 35.0 40.0 32.0 41.0 25 36.78930941239644 38.0 35.0 40.0 32.0 41.0 26 37.01297368824793 39.0 35.0 40.0 33.0 41.0 27 36.911104345658174 39.0 35.0 40.0 32.0 41.0 28 36.979189839674746 39.0 35.0 40.0 33.0 41.0 29 36.94492894676281 39.0 35.0 40.0 33.0 41.0 30 36.6270472154035 39.0 35.0 40.0 31.0 41.0 31 36.48499108238723 38.0 35.0 40.0 31.0 41.0 32 36.165623082233815 38.0 35.0 40.0 30.0 41.0 33 35.95971732126419 38.0 35.0 40.0 30.0 41.0 34 35.78697692927278 38.0 35.0 40.0 29.0 41.0 35 35.499930480975756 38.0 35.0 40.0 26.0 41.0 36 35.32264018870819 38.0 35.0 40.0 25.0 41.0 37 35.31000210954281 38.0 35.0 40.0 25.0 41.0 38 35.21136899739184 38.0 35.0 40.0 25.0 41.0 39 35.09150861077018 38.0 35.0 40.0 24.0 41.0 40 34.97024346041731 38.0 35.0 40.0 23.0 41.0 41 34.90246720619822 38.0 35.0 40.0 23.0 41.0 42 34.964269618748084 38.0 35.0 40.0 23.0 41.0 43 34.85940136928506 38.0 35.0 40.0 22.0 41.0 44 34.746864452285976 38.0 35.0 40.0 22.0 41.0 45 34.748777424056456 38.0 35.0 40.0 22.0 41.0 46 34.63567476603252 38.0 34.0 40.0 22.0 41.0 47 34.54272303620743 38.0 34.0 40.0 21.0 41.0 48 34.51661984120896 38.0 34.0 40.0 21.0 41.0 49 34.50208077631175 38.0 34.0 40.0 20.0 41.0 50 34.42428419377109 38.0 34.0 40.0 20.0 41.0 51 33.52607203129794 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 8.0 10 8.0 11 9.0 12 19.0 13 24.0 14 19.0 15 38.0 16 61.0 17 92.0 18 177.0 19 377.0 20 684.0 21 994.0 22 1534.0 23 2449.0 24 3667.0 25 5352.0 26 6924.0 27 7761.0 28 7558.0 29 7343.0 30 7730.0 31 9229.0 32 11538.0 33 15661.0 34 23406.0 35 36985.0 36 48425.0 37 61298.0 38 87617.0 39 70139.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.95657218471924 24.08810217858239 24.133888846271862 18.82143679042651 2 37.13778191162934 23.955296870205583 24.58264613378337 14.324275084381712 3 26.27291730592206 24.255666999079473 36.32896402270635 13.142451672292113 4 24.203887312058914 24.959487189321877 35.20371471310218 15.63291078551703 5 18.14039007364222 33.398377569806684 33.19749156182878 15.263740794722308 6 20.34342397974839 32.71517336606321 34.554311138386005 12.387091515802394 7 65.62092474685485 7.8920872967167846 21.623772629640996 4.863215326787358 8 63.915790886775085 7.289189552009819 21.843596578705125 6.951422982509972 9 58.03615948143602 10.874213715863762 24.16193617674133 6.927690625958884 10 24.728636084688553 35.54315932801473 28.960187173979747 10.768017413316969 11 18.095322568272476 25.873542497698683 37.5664026541884 18.464732279840444 12 18.94681075483277 21.614902961030992 41.46785823872354 17.970428045412703 13 19.33252147898128 24.3498772629641 41.83654878797177 14.481052470082847 14 14.429752224608775 27.93178505676588 39.650055615219394 17.988407103405955 15 12.790781297944154 28.03390610616754 41.880657410248546 17.29465518563977 16 14.026781604786745 29.164189552009816 37.98591400736422 18.823114835839213 17 13.94144100951212 28.754746471310217 36.06191508131328 21.241897437864377 18 12.97201020251611 28.520539275851487 41.16077592819883 17.34667459343357 19 14.293351104633324 28.80269062595888 38.360118134397055 18.54384013501074 20 14.298385240871433 31.578657180116597 38.335666615526236 15.78729096348573 21 15.514488723534829 29.026350107394904 39.537866293341516 15.92129487572875 22 13.063823258668302 28.80340978827861 36.51474762196993 21.618019331083154 23 13.062145213255599 27.984044185332923 37.7821513501074 21.17165925130408 24 15.530310294568887 27.304915234734583 37.14185716477447 20.02291730592206 25 12.957387235348266 30.918226449831238 34.45602562135625 21.668360693464255 26 12.284730745627494 33.31663278613072 35.39764881865603 19.000987649585763 27 15.585925513961337 30.91750728751151 36.16475529303467 17.331811905492483 28 13.058789122430191 29.684863071494323 36.30331389996931 20.953033906106167 29 13.833566661552624 30.00489030377416 36.301156413010126 19.860386621663086 30 16.138481896287203 33.530703436637005 32.8700329855784 17.46078168149739 31 16.319950521632403 33.481320957348885 30.150400813132862 20.048327707885853 32 14.489922138692851 33.73566469776005 30.8853847038969 20.8890284596502 33 17.181506980668917 32.4373369898742 29.277098036207427 21.104057993249466 34 15.514968165081314 29.76972422522246 30.506386161399202 24.208921448297023 35 14.335302239950906 32.638222997852104 28.89977753912243 24.126697223074565 36 18.767499616446763 34.79594967781528 27.611997545259282 18.824553160478676 37 18.480074409328015 31.127742405645904 31.097058146670758 19.295125038355323 38 17.397735118134396 31.037367674133172 30.401148741945384 21.16374846578705 39 19.61850836146057 29.432676818042346 30.69864222154035 20.250172598956734 40 17.376879410862227 29.634281988339982 29.742635777845965 23.246202822951826 41 17.043907256827246 30.439264344891072 25.993882325866828 26.52294607241485 42 20.844680116600184 28.95898857011353 28.630091669223688 21.566239644062595 43 22.002291730592205 27.20878720466401 31.133495704203746 19.655425360540043 44 18.365487879717705 28.409308837066582 29.834688554771404 23.39051472844431 45 18.837737803007055 27.05680423442774 29.543188094507517 24.562269868057687 46 20.188804081006445 28.091199370972692 30.332348880024547 21.38764766799632 47 16.22885662779994 28.737966017183187 33.41923327707886 21.61394407793802 48 17.541567582080393 26.679004295796254 32.28847038969009 23.490957732433262 49 20.103703206505063 24.261660018410556 34.54016761276465 21.09446916231973 50 18.300523550168762 23.286475912856705 32.498945228597734 25.914055308376803 51 17.427220773243327 23.288153958269408 29.03378145136545 30.250843817121815 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4224.0 1 5357.5 2 6491.0 3 12208.5 4 17926.0 5 11687.0 6 5448.0 7 5278.0 8 5108.0 9 5791.0 10 6474.0 11 6878.5 12 7283.0 13 7214.0 14 7145.0 15 6415.5 16 5686.0 17 5257.0 18 4828.0 19 4487.0 20 4146.0 21 4009.5 22 3873.0 23 4192.0 24 4511.0 25 5061.0 26 5865.5 27 6120.0 28 6237.0 29 6354.0 30 6584.5 31 6815.0 32 7370.0 33 7925.0 34 8117.0 35 8309.0 36 9114.5 37 9920.0 38 11341.5 39 12763.0 40 13924.0 41 15085.0 42 18543.0 43 22001.0 44 24792.0 45 27583.0 46 33581.0 47 39579.0 48 45911.0 49 52243.0 50 49560.0 51 46877.0 52 35760.0 53 24643.0 54 18714.0 55 12785.0 56 10404.5 57 8024.0 58 7150.0 59 6276.0 60 5804.0 61 5332.0 62 4586.5 63 3841.0 64 3042.0 65 2243.0 66 1848.5 67 1454.0 68 1138.0 69 822.0 70 710.5 71 599.0 72 503.5 73 408.0 74 295.0 75 146.0 76 110.0 77 80.5 78 51.0 79 38.0 80 25.0 81 24.5 82 24.0 83 12.5 84 1.0 85 0.5 86 0.0 87 0.5 88 1.0 89 1.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 417152.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.67683777363965 #Duplication Level Percentage of deduplicated Percentage of total 1 73.58023812804586 30.66591647808342 2 10.830786614942605 9.027858734237414 3 4.471810561502883 5.591127699786122 4 2.460766232611675 4.1022782030162865 5 1.6531313017239244 3.4448642540236865 6 1.2274356262317374 3.0693381283227548 7 0.9550774901039154 2.7863226731421067 8 0.762167097500934 2.5411771583161777 9 0.6307552898137803 2.3659097299590583 >10 3.2741940660185973 21.515749184596434 >50 0.09136781009902231 2.6051518311545125 >100 0.051794491075241936 3.7979771458940976 >500 0.005237645164912105 1.6633582774469458 >1k 0.004655684591032982 4.02329937391221 >5k 0.0 0.0 >10k+ 5.819605738791228E-4 2.799671128108792 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11543 2.7670968855477143 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3289 0.7884416231972998 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCC 2944 0.7057379564283522 No Hit CCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 2487 0.5961855630561521 No Hit GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 2394 0.5738915311445228 No Hit CTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGCT 1634 0.391703743479595 No Hit TCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 1362 0.3264996931574103 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1259 0.3018084535133476 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1219 0.2922196225836146 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 930 0.22294031911629336 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCG 891 0.21359120895980363 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 854 0.20472154034980056 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 828 0.19848880024547405 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 823 0.19729019637925743 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 791 0.189619131635471 No Hit ACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 622 0.14910632095734888 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGC 567 0.13592167842896594 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 552 0.13232586683031605 No Hit GCCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTG 439 0.1052374194538202 No Hit AGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTG 438 0.10499769868057686 No Hit CGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTG 437 0.10475797790733354 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.424066047867444 0.0 2 0.0 0.0 0.0 2.1663566277999387 0.0 3 0.0 0.0 0.0 2.9535996471310217 0.0 4 0.0 0.0 0.0 4.025391224301933 0.0 5 0.0 0.0 0.0 6.826049018103713 0.0 6 0.0 0.0 0.0 8.24495627493096 0.0 7 0.0 0.0 0.0 9.78516224301933 0.0 8 0.0 0.0 0.0 12.004736882479287 0.0 9 0.0 0.0 0.0 12.797733200368212 0.0 10 0.0 0.0 0.0 15.051108468855476 0.0 11 0.0 0.0 0.0 19.075301089291195 0.0 12 0.0 0.0 0.0 21.908321187480823 0.0 13 0.0 0.0 0.0 22.95254487572875 0.0 14 0.0 0.0 0.0 23.36102907333538 0.0 15 0.0 0.0 0.0 24.169367520711877 0.0 16 0.0 0.0 0.0 25.77333921448297 0.0 17 0.0 0.0 0.0 27.923394829702364 0.0 18 0.0 0.0 0.0 29.92026887081927 0.0 19 0.0 0.0 0.0 31.28667727830623 0.0 20 0.0 0.0 0.0 32.70438593126726 0.0 21 0.0 0.0 0.0 34.28102945688862 0.0 22 0.0 0.0 0.0 35.87613148204971 0.0 23 0.0 0.0 0.0 37.21736920834612 0.0 24 0.0 0.0 0.0 38.16858123657563 0.0 25 0.0 0.0 0.0 38.92825636698374 0.0 26 0.0 0.0 0.0 39.57694077938018 0.0 27 0.0 0.0 0.0 40.172646900889845 0.0 28 0.0 0.0 0.0 40.72256635471003 0.0 29 0.0011986038662166309 0.0 0.0 41.35279226756674 0.0 30 0.0011986038662166309 0.0 0.0 41.96408023933722 0.0 31 0.0011986038662166309 0.0 0.0 42.4552681037128 0.0 32 0.0011986038662166309 0.0 0.0 42.89899125498619 0.0 33 0.0011986038662166309 0.0 0.0 43.29692773857011 0.0 34 0.0011986038662166309 0.0 0.0 43.72770596808837 0.0 35 0.0011986038662166309 0.0 0.0 44.13163547100338 0.0 36 0.0011986038662166309 0.0 0.0 44.53556497391838 0.0 37 0.0011986038662166309 0.0 0.0 44.92127569806689 0.0 38 0.0011986038662166309 0.0 0.0 45.29212373427432 0.0 39 0.0011986038662166309 0.0 0.0 45.64523243326174 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 30 2.1621636E-6 45.000004 1 ATGTACG 35 1.209446E-7 45.000004 1 AAGTTCG 30 2.1621636E-6 45.000004 1 GACGGGC 30 2.1621636E-6 45.000004 4 CGGTCTA 35 1.209446E-7 45.000004 31 TAGTACG 30 2.1621636E-6 45.000004 1 CTCACGA 40 6.7975634E-9 45.0 24 CCTTAAT 25 3.8865182E-5 45.0 42 GGCGTAG 20 7.0281135E-4 45.0 1 GGCCGAT 20 7.0281135E-4 45.0 8 GGGCGCG 20 7.0281135E-4 45.0 7 TATTCGT 25 3.8865182E-5 45.0 14 CGGGCAC 25 3.8865182E-5 45.0 6 TACCTTG 20 7.0281135E-4 45.0 11 ACTAATC 25 3.8865182E-5 45.0 10 GACGACG 20 7.0281135E-4 45.0 1 CTGGCGG 20 7.0281135E-4 45.0 2 TGCACGG 55 1.8189894E-12 45.0 2 GACTAAT 55 1.8189894E-12 45.0 9 TGATCTA 25 3.8865182E-5 45.0 41 >>END_MODULE