##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935172.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1609892 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.129680748770724 33.0 31.0 34.0 30.0 34.0 2 32.26695393231347 34.0 31.0 34.0 30.0 34.0 3 32.18671376713469 33.0 31.0 34.0 30.0 34.0 4 35.89174553324074 37.0 35.0 37.0 35.0 37.0 5 33.25774710353241 37.0 35.0 37.0 30.0 37.0 6 34.375392262338096 37.0 35.0 37.0 28.0 37.0 7 35.699792284202914 37.0 35.0 37.0 32.0 37.0 8 35.73239695582064 37.0 35.0 37.0 35.0 37.0 9 37.8648008686297 39.0 38.0 39.0 35.0 39.0 10 37.41655589319035 39.0 37.0 39.0 34.0 39.0 11 37.28778949146899 39.0 37.0 39.0 34.0 39.0 12 37.49567300166719 39.0 37.0 39.0 35.0 39.0 13 37.45575355365453 39.0 37.0 39.0 35.0 39.0 14 38.533626479291776 40.0 38.0 41.0 34.0 41.0 15 38.682756358811645 40.0 38.0 41.0 34.0 41.0 16 38.68771694001833 40.0 38.0 41.0 34.0 41.0 17 38.6137299893409 40.0 38.0 41.0 34.0 41.0 18 38.29185684505544 39.0 38.0 41.0 34.0 41.0 19 37.849793650754215 39.0 37.0 41.0 34.0 41.0 20 37.41445450999198 39.0 35.0 41.0 34.0 41.0 21 37.29843927418734 39.0 35.0 41.0 33.0 41.0 22 37.26998022227578 39.0 35.0 41.0 33.0 41.0 23 37.07638338472395 38.0 35.0 40.0 33.0 41.0 24 36.80937727499733 38.0 35.0 40.0 33.0 41.0 25 36.5933851463328 38.0 35.0 40.0 33.0 41.0 26 36.84615924546491 38.0 35.0 40.0 33.0 41.0 27 36.768794428446135 38.0 35.0 40.0 33.0 41.0 28 36.7649469653865 38.0 35.0 40.0 33.0 41.0 29 36.73264293505403 38.0 35.0 40.0 33.0 41.0 30 36.37739363882795 38.0 35.0 40.0 32.0 41.0 31 36.04445453483836 38.0 35.0 40.0 31.0 41.0 32 35.5031902761179 38.0 35.0 41.0 26.0 41.0 33 34.93007357015253 38.0 35.0 41.0 21.0 41.0 34 34.39844970966997 38.0 35.0 41.0 17.0 41.0 35 33.98165653348175 38.0 34.0 41.0 15.0 41.0 36 33.73413682408509 38.0 34.0 41.0 10.0 41.0 37 33.653203444703124 38.0 34.0 41.0 10.0 41.0 38 33.5233431807848 38.0 34.0 41.0 10.0 41.0 39 33.38358722199999 38.0 33.0 40.0 10.0 41.0 40 33.24274112797629 38.0 33.0 40.0 10.0 41.0 41 33.08863451709804 38.0 33.0 40.0 10.0 41.0 42 33.0953660245532 38.0 33.0 40.0 10.0 41.0 43 32.99938753655525 38.0 33.0 40.0 10.0 41.0 44 32.90729999279455 38.0 33.0 40.0 10.0 41.0 45 32.890788947333114 38.0 33.0 40.0 10.0 41.0 46 32.82161287837942 38.0 33.0 40.0 10.0 41.0 47 32.757955813184985 37.0 33.0 40.0 10.0 41.0 48 32.68634231364589 37.0 33.0 40.0 10.0 41.0 49 32.64972246585485 37.0 32.0 40.0 10.0 41.0 50 32.55210908557841 37.0 32.0 40.0 9.0 41.0 51 31.800158644182343 36.0 30.0 40.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 15.0 9 22.0 10 26.0 11 52.0 12 54.0 13 80.0 14 98.0 15 152.0 16 275.0 17 493.0 18 903.0 19 1644.0 20 2798.0 21 4617.0 22 7439.0 23 12410.0 24 21580.0 25 36793.0 26 52011.0 27 55468.0 28 49386.0 29 41167.0 30 36440.0 31 36219.0 32 41195.0 33 53073.0 34 80068.0 35 112673.0 36 143940.0 37 167273.0 38 283888.0 39 367493.0 40 143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.07375153115861 17.369239675704954 20.25788065286367 33.299128140272764 2 47.604808272853084 18.939220767604287 21.085327462960247 12.37064349658238 3 23.394612806324897 19.131469688649922 45.9579276125355 11.515989892489682 4 20.993085250439158 20.155389305618016 45.40683474419402 13.444690699748804 5 17.22891970393045 28.60291249350888 41.55949591649627 12.608671886064407 6 19.439502774099132 26.44456895245147 43.37533200984911 10.740596263600292 7 61.54872500764026 4.796843514968706 30.605903998529094 3.048527478861936 8 62.57109172540767 4.2305943504284755 30.151525692406693 3.0467882317571613 9 56.94847853147913 7.565165862057828 31.50882170977929 3.977533896683753 10 21.473117451356984 33.968614043674975 35.76370340370658 8.794565101261451 11 20.018734175957146 20.721141542414028 45.436526176911244 13.823598104717583 12 19.267565774598545 18.767470116007782 47.14738628429733 14.817577825096343 13 18.773619596842522 18.726162997269384 48.96527220459509 13.534945201293006 14 14.623838120818041 20.83313663276791 49.488785583132284 15.05423966328176 15 13.283996690461223 22.09359385598537 49.750293808528774 14.872115645024635 16 16.921818358001655 22.569029475269147 46.68021208876124 13.828940077967964 17 16.64620980786289 21.943521677230525 45.7466712052734 15.663597309633193 18 16.344761015024613 21.54144501618742 47.83532063020377 14.278473338584202 19 15.471099924715448 22.75040810190994 46.892648699415865 14.885843273958749 20 15.537191314696885 24.684016070643246 46.38211755819645 13.396675056463414 21 16.104247986821477 22.41237300390337 48.38746947000171 13.095909539273443 22 15.494455528693852 20.350433445224898 48.284791774851975 15.870319251229276 23 13.91161643141279 21.559458646915445 48.84352490726086 15.685400014410906 24 14.318972949738242 22.229752057902022 47.1850285609221 16.266246431437636 25 14.836647427280836 23.65425755268055 45.60734508898733 15.901749931051276 26 14.297853520608836 23.82190855038723 45.61628978838332 16.263948140620613 27 14.388170138121067 22.075890805097483 47.7027030384647 15.833236018316757 28 12.74476797201303 22.34069117679944 47.132043640194496 17.782497210993036 29 14.058085884022034 22.084649156589386 47.27764346925135 16.579621490137228 30 16.18065062749551 21.743073448405234 46.52566756030839 15.550608363790863 31 14.919634360565803 23.450144481741635 45.525289895222784 16.10493126246978 32 15.507686229883744 23.565555950337043 43.73951793039533 17.187239889383886 33 16.99834523061174 22.97911909618782 42.44371672137013 17.578818951830307 34 15.543030215691486 23.846071661949996 42.26190328295314 18.34899483940538 35 15.441097912158083 25.522954334824945 40.709563125973666 18.326384627043304 36 17.743364151135605 25.49494003324447 40.052748880049094 16.708946935570836 37 16.888275735266713 25.82850278155305 39.75869188740611 17.524529595774126 38 17.84343297562818 25.938385928993995 37.83210302305993 18.386078072317893 39 19.51758254590991 24.150688369157685 36.672273668047296 19.65945541688511 40 19.231538513142496 24.779426197533745 37.80266005421481 18.18637523510894 41 17.82827667942943 26.282197812027142 36.80613357914693 19.083391929396505 42 18.602676452830377 25.574448472319883 38.215234313854594 17.607640760995146 43 18.130595095820095 24.59227078586638 38.904845790897774 18.372288327415752 44 18.471425412387912 23.86458222042224 37.83657537275793 19.827416994431925 45 18.254392220099234 23.19354341781933 37.55376137032795 20.998302991753484 46 18.075622464115607 23.97881348562512 38.5924024717186 19.35316157854067 47 16.29146551445687 25.026771982219927 39.9119940964984 18.769768406824806 48 16.870945380186996 24.735013280393964 39.46538028637946 18.928661053039583 49 18.354088348783645 23.399644199735135 39.22536418592055 19.02090326556067 50 16.762801479850822 23.33908113090816 38.90621234219439 20.991905047046632 51 16.833303103562226 23.162485433805497 37.8167603789571 22.187451083675178 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 8210.0 1 10888.5 2 13567.0 3 84160.0 4 154753.0 5 95405.0 6 36057.0 7 34174.5 8 32292.0 9 32295.0 10 32298.0 11 31646.0 12 30994.0 13 29601.0 14 28208.0 15 26487.5 16 24767.0 17 23689.5 18 22612.0 19 21313.0 20 20014.0 21 20093.5 22 20173.0 23 19638.0 24 19103.0 25 20130.5 26 23602.5 27 26047.0 28 27619.0 29 29191.0 30 32238.0 31 35285.0 32 37981.5 33 40678.0 34 43544.5 35 46411.0 36 49967.0 37 53523.0 38 54838.0 39 56153.0 40 58256.0 41 60359.0 42 66130.5 43 71902.0 44 76749.5 45 81597.0 46 90879.5 47 100162.0 48 109178.0 49 118194.0 50 116165.5 51 114137.0 52 97684.0 53 81231.0 54 70177.0 55 59123.0 56 51904.0 57 44685.0 58 41354.0 59 38023.0 60 33050.5 61 28078.0 62 24478.5 63 20879.0 64 17683.5 65 14488.0 66 11907.0 67 9326.0 68 7782.0 69 6238.0 70 5215.0 71 4192.0 72 3405.5 73 2619.0 74 2080.5 75 1210.5 76 879.0 77 629.5 78 380.0 79 273.5 80 167.0 81 137.0 82 107.0 83 80.0 84 53.0 85 38.0 86 23.0 87 15.0 88 7.0 89 4.0 90 1.0 91 1.5 92 2.0 93 2.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1609892.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.12094789388475 #Duplication Level Percentage of deduplicated Percentage of total 1 75.4025901631523 24.97405259857714 2 8.914381013084025 5.90505498081183 3 3.640177505794425 3.616983884817255 4 2.0629307359426163 2.7330488565539484 5 1.3673670632826942 2.264424662740016 6 0.9856178200035433 1.9586757875772978 7 0.7900692220454775 1.831748907515122 8 0.6396324273085452 1.694818583690028 9 0.551343076763535 1.6434904785425228 >10 5.334318356835767 34.258676229567364 >50 0.23648705132993772 5.177048190940746 >100 0.06869942695382306 3.751700395582126 >500 0.002128712501116262 0.48821490991015287 >1k 0.0034833477290993372 1.8420386367215287 >5k 5.805579548498895E-4 1.2219794220082796 >10k+ 1.9351931828329652E-4 6.63804347444466 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 103565 6.433040228785533 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7224 0.44872575303188045 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCC 6400 0.39754219537708124 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5441 0.3379729820385467 No Hit CCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 2356 0.146345220673188 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCG 2336 0.14510290131263462 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2217 0.13771110111734203 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2106 0.13081622866627077 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1870 0.1161568602117409 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1823 0.11323740971444048 No Hit GCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 1682 0.10447905822253914 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGT 1612 0.10013094046060234 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2423193605533788E-4 0.0 0.0 0.0949753151143058 0.0 2 1.2423193605533788E-4 0.0 0.0 0.4553100456428133 0.0 3 1.2423193605533788E-4 0.0 0.0 0.7239616073624815 0.0 4 1.2423193605533788E-4 0.0 0.0 1.0575864716390913 0.0 5 1.2423193605533788E-4 0.0 0.0 1.9426147840973182 0.0 6 1.2423193605533788E-4 0.0 0.0 2.660302678689005 0.0 7 1.2423193605533788E-4 0.0 0.0 3.3117128353951695 0.0 8 1.2423193605533788E-4 0.0 0.0 4.250533576165358 0.0 9 1.2423193605533788E-4 0.0 0.0 4.685904396071289 0.0 10 1.2423193605533788E-4 0.0 0.0 5.689201511654198 0.0 11 1.2423193605533788E-4 0.0 0.0 7.346828234440571 0.0 12 1.2423193605533788E-4 0.0 0.0 8.47851905593667 0.0 13 1.2423193605533788E-4 0.0 0.0 8.920225704581425 0.0 14 1.2423193605533788E-4 0.0 0.0 9.13409098250069 0.0 15 1.2423193605533788E-4 0.0 0.0 9.454609377523461 0.0 16 1.2423193605533788E-4 0.0 0.0 10.05446328076666 0.0 17 1.2423193605533788E-4 0.0 0.0 10.80911017633481 0.0 18 1.2423193605533788E-4 0.0 0.0 11.561396665117908 0.0 19 1.2423193605533788E-4 0.0 0.0 12.076089576195173 0.0 20 1.2423193605533788E-4 0.0 0.0 12.685012410770412 0.0 21 1.8634790408300682E-4 0.0 0.0 13.33070789841803 0.0 22 1.8634790408300682E-4 0.0 0.0 14.009449081056369 0.0 23 1.8634790408300682E-4 0.0 0.0 14.580791754974868 0.0 24 1.8634790408300682E-4 0.0 0.0 14.981377632785305 0.0 25 1.8634790408300682E-4 0.0 0.0 15.337612709423986 0.0 26 1.8634790408300682E-4 0.0 0.0 15.646453302457557 0.0 27 1.8634790408300682E-4 0.0 0.0 15.976413324620534 0.0 28 1.8634790408300682E-4 0.0 0.0 16.27811058133092 0.0 29 1.8634790408300682E-4 0.0 0.0 16.612729301095975 0.0 30 1.8634790408300682E-4 0.0 0.0 16.972256524040123 0.0 31 1.8634790408300682E-4 0.0 0.0 17.27128279412532 0.0 32 1.8634790408300682E-4 0.0 0.0 17.55484218817163 0.0 33 1.8634790408300682E-4 0.0 0.0 17.81734426905656 0.0 34 1.8634790408300682E-4 0.0 0.0 18.088107773689167 0.0 35 1.8634790408300682E-4 0.0 0.0 18.36166649688302 0.0 36 1.8634790408300682E-4 0.0 0.0 18.617025241444768 0.0 37 2.4846387211067576E-4 0.0 0.0 18.874061117143263 0.0 38 2.4846387211067576E-4 0.0 0.0 19.18029283951967 0.0 39 3.105798401383447E-4 0.0 0.0 19.713869004877346 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGAC 20 7.0341286E-4 45.000004 25 CCGAATA 20 7.0341286E-4 45.000004 42 TATCGCG 20 7.0341286E-4 45.000004 1 TAGTACG 45 3.8562575E-10 45.0 1 CGTTTTT 35050 0.0 44.22325 1 CGTTATT 2640 0.0 43.721592 1 CGACGGT 240 0.0 43.124996 28 CGACAGG 70 0.0 41.785713 2 CGGTCTA 255 0.0 40.588234 31 ACGGGTA 145 0.0 40.344826 5 CGAATAT 110 0.0 38.863636 14 ACAACGA 470 0.0 38.776596 13 CACGACG 280 0.0 38.571426 26 GTTTTTT 41980 0.0 37.98952 2 CGTAAGG 160 0.0 37.968754 2 AGCGACT 505 0.0 37.87129 19 CTCACGA 280 0.0 37.767857 24 CGCGACG 30 1.14012524E-4 37.499996 1 CCGTTTA 30 1.14012524E-4 37.499996 26 TCGGTAG 30 1.14012524E-4 37.499996 1 >>END_MODULE