##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935170.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 289009 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.63664453356124 31.0 31.0 34.0 30.0 34.0 2 31.737862834721412 31.0 31.0 34.0 30.0 34.0 3 31.734139767273682 33.0 31.0 34.0 30.0 34.0 4 35.564805940299436 37.0 35.0 37.0 33.0 37.0 5 33.05097419111515 37.0 35.0 37.0 28.0 37.0 6 34.06670380507182 37.0 35.0 37.0 28.0 37.0 7 35.31804199869208 37.0 35.0 37.0 32.0 37.0 8 35.22603102325533 37.0 35.0 37.0 32.0 37.0 9 37.33843236715811 39.0 37.0 39.0 34.0 39.0 10 36.8765574774488 39.0 37.0 39.0 32.0 39.0 11 36.78906885252709 39.0 37.0 39.0 32.0 39.0 12 37.11243248480151 39.0 37.0 39.0 33.0 39.0 13 37.03882924061188 39.0 37.0 39.0 33.0 39.0 14 38.00186499382372 40.0 37.0 41.0 33.0 41.0 15 38.15139320920802 40.0 37.0 41.0 33.0 41.0 16 38.12271590158092 40.0 37.0 41.0 33.0 41.0 17 38.045756360528564 40.0 37.0 41.0 33.0 41.0 18 37.872391517219185 39.0 37.0 40.0 33.0 41.0 19 37.59107847852489 39.0 36.0 40.0 33.0 41.0 20 37.384863447159084 39.0 35.0 40.0 33.0 41.0 21 37.29108782079451 39.0 35.0 40.0 33.0 41.0 22 37.23684383531309 39.0 35.0 40.0 33.0 41.0 23 36.97388316626818 39.0 35.0 40.0 32.0 41.0 24 36.66433225262881 38.0 35.0 40.0 32.0 41.0 25 36.47733461587701 38.0 35.0 40.0 31.0 41.0 26 36.76363019836752 38.0 35.0 40.0 32.0 41.0 27 36.59488804846908 38.0 35.0 40.0 32.0 41.0 28 36.695822621440854 38.0 35.0 40.0 32.0 41.0 29 36.79100996854769 38.0 35.0 40.0 33.0 41.0 30 36.38125802310655 38.0 35.0 40.0 31.0 41.0 31 36.25132781332069 38.0 35.0 40.0 31.0 41.0 32 36.057036286067216 38.0 35.0 40.0 30.0 41.0 33 35.827327176662315 38.0 35.0 40.0 30.0 41.0 34 35.651695967945635 38.0 35.0 40.0 27.0 41.0 35 35.441577943939464 38.0 35.0 40.0 25.0 41.0 36 35.15629963080735 38.0 35.0 40.0 24.0 41.0 37 35.071246916186 38.0 35.0 40.0 24.0 41.0 38 35.06958606825393 38.0 35.0 40.0 23.0 41.0 39 35.03880501991287 38.0 35.0 40.0 23.0 41.0 40 34.89279918618451 38.0 35.0 40.0 23.0 41.0 41 34.76333954997941 38.0 35.0 40.0 22.0 41.0 42 34.801345286824976 38.0 35.0 40.0 22.0 41.0 43 34.628385275199044 38.0 35.0 40.0 21.0 41.0 44 34.509240196672074 38.0 34.0 40.0 20.0 41.0 45 34.49730631226017 38.0 34.0 40.0 20.0 41.0 46 34.36288835295787 38.0 34.0 40.0 20.0 41.0 47 34.27286347483988 38.0 34.0 40.0 20.0 41.0 48 34.25605776982724 38.0 34.0 40.0 20.0 41.0 49 34.247417900480606 38.0 34.0 40.0 20.0 41.0 50 34.126380147331055 38.0 34.0 40.0 20.0 41.0 51 33.235442494870405 36.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 7.0 10 10.0 11 13.0 12 11.0 13 8.0 14 19.0 15 33.0 16 45.0 17 99.0 18 153.0 19 329.0 20 519.0 21 841.0 22 1288.0 23 1940.0 24 2745.0 25 3789.0 26 5059.0 27 5773.0 28 5723.0 29 5560.0 30 5829.0 31 6872.0 32 8463.0 33 11302.0 34 16982.0 35 27529.0 36 32665.0 37 39359.0 38 58761.0 39 47275.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.738395690099615 24.726219598697618 21.773716389455 19.761668321747766 2 36.6590659806442 25.789508285209113 23.062257576753666 14.489168157393022 3 24.737983938216455 25.50474206685605 36.813040424346646 12.944233570580845 4 22.819358566688237 28.016774564113923 34.76293125819611 14.400935611001733 5 17.526789823154296 33.59410952600092 33.77576476857122 15.103335882273564 6 19.70699874398375 33.581653166510385 34.10862637495718 12.602721714548682 7 60.392928939929206 11.119030895231637 23.08232615593286 5.405714008906297 8 56.75670999865056 11.019380019307356 23.86084862409129 8.36306135795079 9 52.366189288222856 13.371209893117516 26.422014539339607 7.8405862793200205 10 21.2948385690411 35.37398489320402 31.30629149957268 12.024885038182202 11 17.53786214270144 26.834804452456495 37.359736201986784 18.267597202855274 12 17.597721870253174 24.099249504340694 41.522582341726384 16.780446283679748 13 18.153067897539525 26.741035746291637 42.3038728897716 12.802023466397241 14 13.002363248203345 30.364106308108052 38.956226276690344 17.67730416699826 15 11.281655588580286 30.344037728928857 42.04090530052697 16.33340138196388 16 11.371618184900816 31.4837946223128 38.78806542356813 18.356521769218258 17 11.93907456169185 31.139860696379696 36.088149503994686 20.832915237933765 18 10.935645602732095 30.767207941621194 41.35753557847679 16.939610877169915 19 12.188893771474245 31.164427405374916 38.874567920030174 17.772110903120662 20 12.211384420554378 33.89859831354733 39.05380109269954 14.836216173198757 21 13.876384472455875 31.844683037552464 39.54548128258982 14.733451207401846 22 11.250514689853949 31.655069565307652 35.524153227062136 21.57026251777626 23 11.373002224844209 30.380714787428765 37.218910137746576 21.02737284998045 24 14.871163181769425 29.38420602818597 35.82518191475006 19.919448875294542 25 12.375739163832268 31.8664816666609 33.409686203543835 22.348092965962998 26 13.591964264088663 32.63842994508821 35.002370168403054 18.767235622420063 27 15.974589026639308 32.65676847433817 34.636291603375675 16.73235089564685 28 13.325536574985556 30.617385617748926 34.77261953779986 21.284458269465656 29 16.930268607552012 27.912279548387765 33.814863896972064 21.342587947088155 30 17.266936323782303 33.48096426062856 32.76368555996526 16.488413855623875 31 17.088741181070485 35.54249175631209 29.119508389012104 18.249258673605322 32 15.747952485908742 33.094125096450284 30.611157438003662 20.546764979637313 33 18.464822894788743 30.446110674754074 31.83983889775059 19.249227532706595 34 17.756886463743342 30.839870038649313 30.987270292620643 20.415973204986695 35 17.8894082883232 29.727447934147378 31.171001595106034 21.212142182423385 36 21.472341691781224 33.03149728901176 30.07207388005218 15.424087139154835 37 19.25891581231034 32.87302471549329 31.470992252836417 16.39706721935995 38 16.911238058330362 31.084845108629832 30.811497219809763 21.192419613230037 39 19.80907168980897 28.02646284371767 33.47681214079839 18.68765332567498 40 18.09078610008685 30.72015058354584 35.09510084461038 16.093962471756935 41 18.69630357532118 31.522547740727795 30.64748848651772 19.133660197433297 42 22.78164347823078 28.444788916608132 31.291759080167054 17.48180852499403 43 23.523142877903457 26.76387240535762 31.240203592275673 18.472781124463253 44 19.476210083423005 27.337902971879767 29.58419980000623 23.601687144691 45 20.257500631468226 25.468757028327836 30.02363248203343 24.250109858170507 46 20.654028075250253 28.304308862353768 33.29204280835545 17.749620254040533 47 16.748959374967562 28.972108135040774 36.38571809182413 17.89321439816753 48 16.823351521924923 26.594327512292004 34.75428100854991 21.828039957233166 49 21.016300530433305 23.229034389932494 36.58501984367269 19.16964523596151 50 18.202547325515813 23.70998827026148 34.47989508977229 23.607569314450416 51 17.073170731707318 22.935963931919076 31.096263438162826 28.89460189821078 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6553.0 1 6480.0 2 6407.0 3 10163.0 4 13919.0 5 9163.0 6 4407.0 7 4199.0 8 3991.0 9 4255.0 10 4519.0 11 4863.5 12 5208.0 13 5068.0 14 4928.0 15 4813.0 16 4698.0 17 4660.0 18 4622.0 19 4043.5 20 3465.0 21 3107.0 22 2749.0 23 2750.0 24 2751.0 25 3848.0 26 4326.5 27 3708.0 28 4222.5 29 4737.0 30 4723.5 31 4710.0 32 4830.0 33 4950.0 34 4999.0 35 5048.0 36 5306.5 37 5565.0 38 5927.5 39 6290.0 40 7381.0 41 8472.0 42 10834.5 43 13197.0 44 15191.5 45 17186.0 46 21997.5 47 26809.0 48 32637.0 49 38465.0 50 36440.0 51 34415.0 52 26273.5 53 18132.0 54 13420.0 55 8708.0 56 6682.0 57 4656.0 58 3955.0 59 3254.0 60 2982.5 61 2711.0 62 2461.5 63 2212.0 64 1635.5 65 1059.0 66 850.0 67 641.0 68 491.5 69 342.0 70 310.0 71 278.0 72 219.5 73 161.0 74 117.0 75 57.0 76 41.0 77 28.5 78 16.0 79 11.0 80 6.0 81 4.0 82 2.0 83 2.0 84 2.0 85 1.0 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 289009.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.13618229040011 #Duplication Level Percentage of deduplicated Percentage of total 1 70.41969608491037 25.44698974558896 2 11.892922080557906 8.5952960053713 3 5.081914257339217 5.5092293996217965 4 2.790409581077537 4.033389971467876 5 1.8946411948888255 3.4232549796702036 6 1.298959085949359 2.8163653390582524 7 1.0226004239536943 2.5867012731161787 8 0.7871523234635812 2.2755743880793573 9 0.7422576287667759 2.414012128160071 >10 3.845971927560274 22.563946937186408 >50 0.12370960281262144 3.125309259821643 >100 0.08280562123748049 5.564917953005754 >500 0.007981264697588482 1.870354647589651 >1k 0.006983606610389921 4.805672215183124 >5k 0.0019953161743971205 4.968985757079445 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8324 2.8801871222003466 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5459 1.888868512745278 No Hit CCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 2740 0.948067361224045 RNA PCR Primer, Index 38 (96% over 25bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCC 2201 0.7615679788518697 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2130 0.737001269856648 No Hit GCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 1869 0.64669266355027 RNA PCR Primer, Index 27 (95% over 23bp) GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1672 0.5785286963381763 No Hit CTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGCT 1508 0.5217830586590729 RNA PCR Primer, Index 38 (96% over 26bp) TCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 1210 0.41867208287631175 RNA PCR Primer, Index 27 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 814 0.2816521284804279 RNA PCR Primer, Index 27 (95% over 23bp) CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 769 0.26608167911725933 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCG 728 0.2518952696974835 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 691 0.23909290022110039 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 561 0.19411160206083547 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 551 0.19065150220235358 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 550 0.19030549221650536 No Hit GATTTGGGGTTTATGTTTTTATTTTATTATTATTTTTTTTAATGAAGTAAG 524 0.1813092325844524 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGC 465 0.1608946434194091 No Hit GCCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTG 434 0.15016833385811515 RNA PCR Primer, Index 27 (95% over 22bp) ACCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTG 430 0.1487842939147224 RNA PCR Primer, Index 27 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTG 429 0.14843828392887418 RNA PCR Primer, Index 38 (95% over 24bp) TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 424 0.14670823399963323 No Hit GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 414 0.1432481341411513 No Hit AAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAA 369 0.1276776847779827 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 351 0.12144950503271525 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGT 333 0.11522132528744779 No Hit AGCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTG 328 0.11349127535820683 RNA PCR Primer, Index 38 (95% over 24bp) CGTTTTTCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTC 318 0.11003117549972492 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.460099858481916E-4 0.0 0.0 0.5657263268617932 0.0 2 3.460099858481916E-4 0.0 0.0 3.0005985972755176 0.0 3 3.460099858481916E-4 0.0 0.0 4.056621074084198 0.0 4 3.460099858481916E-4 0.0 0.0 5.32474767221782 0.0 5 3.460099858481916E-4 0.0 0.0 8.694884934379207 0.0 6 3.460099858481916E-4 0.0 0.0 10.340854437059054 0.0 7 3.460099858481916E-4 0.0 0.0 12.039071447601978 0.0 8 3.460099858481916E-4 0.0 0.0 14.662519160302967 0.0 9 3.460099858481916E-4 0.0 0.0 15.583597742630852 0.0 10 3.460099858481916E-4 0.0 0.0 18.20877550526108 0.0 11 3.460099858481916E-4 0.0 0.0 22.752578639419532 0.0 12 3.460099858481916E-4 0.0 0.0 25.79366040503929 0.0 13 3.460099858481916E-4 0.0 0.0 26.974938496725017 0.0 14 3.460099858481916E-4 0.0 0.0 27.411603098865434 0.0 15 3.460099858481916E-4 0.0 0.0 28.30188679245283 0.0 16 3.460099858481916E-4 0.0 0.0 30.00287188288254 0.0 17 3.460099858481916E-4 0.0 0.0 32.0474448892595 0.0 18 3.460099858481916E-4 0.0 0.0 34.13215505399486 0.0 19 3.460099858481916E-4 0.0 0.0 35.48920621849147 0.0 20 3.460099858481916E-4 0.0 0.0 36.83899117328526 0.0 21 3.460099858481916E-4 0.0 0.0 38.37458349047954 0.0 22 3.460099858481916E-4 0.0 0.0 39.95377306589068 0.0 23 3.460099858481916E-4 0.0 0.0 41.35096138874568 0.0 24 3.460099858481916E-4 0.0 0.0 42.21218024352183 0.0 25 3.460099858481916E-4 0.0 0.0 42.931881014086066 0.0 26 3.460099858481916E-4 0.0 0.0 43.52494212982987 0.0 27 3.460099858481916E-4 0.0 0.0 43.99932182042774 0.0 28 3.460099858481916E-4 0.0 0.0 44.511070589497216 0.0 29 3.460099858481916E-4 0.0 0.0 45.050154147448694 0.0 30 3.460099858481916E-4 0.0 0.0 45.586469625513395 0.0 31 3.460099858481916E-4 0.0 0.0 46.049084976592425 0.0 32 3.460099858481916E-4 0.0 0.0 46.479175389001725 0.0 33 3.460099858481916E-4 0.0 0.0 46.86082440339228 0.0 34 3.460099858481916E-4 0.0 0.0 47.23036306827815 0.0 35 3.460099858481916E-4 0.0 0.0 47.62792854201772 0.0 36 3.460099858481916E-4 0.0 0.0 47.98224276752627 0.0 37 3.460099858481916E-4 0.0 0.0 48.30472407433678 0.0 38 3.460099858481916E-4 0.0 0.0 48.623053261317125 0.0 39 3.460099858481916E-4 0.0 0.0 48.9804815766983 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAATGG 45 3.8198777E-10 45.000004 2 CATGGGT 20 7.0245145E-4 45.0 4 ATGGGCG 20 7.0245145E-4 45.0 5 CGGGTCA 20 7.0245145E-4 45.0 6 TCCATTG 20 7.0245145E-4 45.0 1 TGCCCTC 20 7.0245145E-4 45.0 42 CATATCC 20 7.0245145E-4 45.0 3 TTGCTAG 35 1.207718E-7 45.0 1 TTGTCGG 20 7.0245145E-4 45.0 2 TCGGGAA 20 7.0245145E-4 45.0 5 TAAGTTA 20 7.0245145E-4 45.0 24 AATGGGT 20 7.0245145E-4 45.0 4 ACTTAGG 20 7.0245145E-4 45.0 30 TCTAGCG 20 7.0245145E-4 45.0 1 AGAACCC 20 7.0245145E-4 45.0 25 CGTTATT 170 0.0 45.0 1 TAGTTCG 20 7.0245145E-4 45.0 1 TGCATAG 20 7.0245145E-4 45.0 1 GTCACTA 20 7.0245145E-4 45.0 24 CGAATTG 20 7.0245145E-4 45.0 41 >>END_MODULE