##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935168.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 978277 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.83538506987285 33.0 31.0 34.0 30.0 34.0 2 31.947123360765918 33.0 31.0 34.0 30.0 34.0 3 31.90965544523688 33.0 31.0 34.0 30.0 34.0 4 35.684299027780476 37.0 35.0 37.0 33.0 37.0 5 33.324468427653926 37.0 35.0 37.0 30.0 37.0 6 34.270666692562536 37.0 35.0 37.0 29.0 37.0 7 35.53040089872296 37.0 35.0 37.0 32.0 37.0 8 35.509273958193845 37.0 35.0 37.0 33.0 37.0 9 37.56502912774194 39.0 37.0 39.0 35.0 39.0 10 37.050910938312974 39.0 37.0 39.0 33.0 39.0 11 36.97390105256487 39.0 37.0 39.0 33.0 39.0 12 37.211445224614295 39.0 37.0 39.0 34.0 39.0 13 37.173911887941756 39.0 37.0 39.0 34.0 39.0 14 38.115447874170606 40.0 38.0 41.0 33.0 41.0 15 38.23869926411436 40.0 38.0 41.0 33.0 41.0 16 38.247361432395934 40.0 38.0 41.0 33.0 41.0 17 38.2207360491967 40.0 38.0 41.0 33.0 41.0 18 38.047204421651536 39.0 37.0 41.0 34.0 41.0 19 37.792830660436664 39.0 37.0 41.0 34.0 41.0 20 37.54427426996648 39.0 35.0 41.0 33.0 41.0 21 37.44458675814723 39.0 35.0 40.0 33.0 41.0 22 37.44038753849881 39.0 35.0 40.0 33.0 41.0 23 37.230223137209606 39.0 35.0 40.0 33.0 41.0 24 36.97787640923787 39.0 35.0 40.0 32.0 41.0 25 36.76173415096133 38.0 35.0 40.0 32.0 41.0 26 37.01242592844358 39.0 35.0 40.0 33.0 41.0 27 36.95936427003804 39.0 35.0 40.0 33.0 41.0 28 36.973360305925624 39.0 35.0 40.0 33.0 41.0 29 36.90938660522531 39.0 35.0 40.0 33.0 41.0 30 36.6311136825255 39.0 35.0 40.0 31.0 41.0 31 36.39751522319343 39.0 35.0 40.0 31.0 41.0 32 35.981038090438595 38.0 35.0 40.0 30.0 41.0 33 35.76318466037738 39.0 35.0 40.0 28.0 41.0 34 35.47649694309485 39.0 35.0 40.0 25.0 41.0 35 35.18841493769147 38.0 35.0 40.0 23.0 41.0 36 35.080466984299946 38.0 35.0 40.0 23.0 41.0 37 34.99690578435351 38.0 35.0 40.0 22.0 41.0 38 34.86054052175406 38.0 35.0 40.0 22.0 41.0 39 34.7333638632003 38.0 34.0 40.0 21.0 41.0 40 34.670991958310374 38.0 34.0 40.0 21.0 41.0 41 34.62465130019412 38.0 34.0 40.0 20.0 41.0 42 34.74669444339384 38.0 35.0 40.0 21.0 41.0 43 34.67851845642901 38.0 35.0 40.0 20.0 41.0 44 34.56434220573519 38.0 35.0 40.0 18.0 41.0 45 34.490801685003326 38.0 34.0 40.0 20.0 41.0 46 34.398208278432385 38.0 34.0 40.0 20.0 41.0 47 34.33720510652913 38.0 34.0 40.0 20.0 41.0 48 34.321470299311954 38.0 34.0 40.0 20.0 41.0 49 34.327408290289966 38.0 34.0 40.0 19.0 41.0 50 34.25831231849466 38.0 34.0 40.0 18.0 41.0 51 33.3064357027713 37.0 33.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 27.0 10 30.0 11 27.0 12 24.0 13 35.0 14 59.0 15 98.0 16 154.0 17 263.0 18 432.0 19 821.0 20 1436.0 21 2405.0 22 3730.0 23 5782.0 24 9226.0 25 14639.0 26 19182.0 27 20807.0 28 19947.0 29 18897.0 30 19513.0 31 22268.0 32 27926.0 33 37331.0 34 55766.0 35 76028.0 36 100253.0 37 132746.0 38 205708.0 39 182656.0 40 52.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.21188477292219 20.57065636828833 21.577221993361796 23.640236865427685 2 41.026314632767615 21.372065376166464 24.3481140822078 13.253505908858127 3 27.07126918040596 22.01390812622601 38.2537870153341 12.66103567803393 4 24.163708233966453 23.33388191688039 37.460146768246624 15.042263080906531 5 18.702984941892737 30.90576595381472 35.275080575338066 15.11616852895448 6 21.42164233647525 29.722256579680394 36.4484701163372 12.407630967507158 7 66.20875273567711 6.119739092302078 23.007900625283025 4.663607546737785 8 65.41961019220528 5.372404748348371 23.628072621558108 5.579912437888247 9 59.077132550392164 8.935812658377944 25.47274442719189 6.514310364037998 10 23.61825945003307 33.81434910562142 30.429418252703478 12.13797319164204 11 20.71826282331078 21.98988630009701 38.95583766152122 18.336013215070988 12 20.838167512882343 19.61417880620724 41.50041348207103 18.047240198839386 13 21.10302092352166 19.51686485525061 43.93224005061961 15.44787417060812 14 16.05751745160113 22.989909810820453 43.0407747498919 17.911797987686516 15 13.761746417425739 23.98226678128996 44.78588375276123 17.470103048523068 16 16.148187067671017 24.672562065754384 40.743879289812604 18.435371576761998 17 16.04944202920032 23.654036637884772 40.32630839731487 19.97021293560004 18 15.537317140237377 23.313233368463123 43.66135562831386 17.488093862985636 19 15.545085901028033 24.814341950183845 42.062319772416195 17.57825237637193 20 15.22912222202914 27.22398666226437 41.63984229415595 15.907048821550543 21 15.424159006089278 25.336177790135107 43.545846421821224 15.693816781954395 22 13.875108992647277 23.407480703318182 41.761280291778306 20.956130012256242 23 13.418183193512675 23.912654595784222 42.2273037186809 20.441858492022195 24 15.238526511407303 24.045643514055833 40.350534664517305 20.365295310019555 25 14.128718144247488 26.776260711434492 38.19204581115574 20.902975333162285 26 12.982825927625816 27.44151196440272 39.43218536263247 20.143476745338997 27 15.627066771476791 25.157700733023468 40.58124641589243 18.633986079607308 28 13.520812612378702 24.85083468179258 40.068303762635736 21.56004894319298 29 15.727856220681872 25.032787237152665 39.37974622729554 19.85961031486992 30 20.077442278618427 25.210957632654146 37.00086989676748 17.710730191959946 31 18.23491710425575 28.47956151478569 34.79730178671276 18.488219594245802 32 18.141487533694445 27.420352313301855 35.522658715271845 18.915501437731848 33 20.798505944635313 24.769467134564135 33.853192909574695 20.57883401122586 34 18.042129172003428 26.608210149068206 34.865482884704434 20.484177794223925 35 17.840448053056548 27.91438416726551 34.49074239709203 19.754425382585914 36 22.384355351296207 27.48761342646306 31.288172981681058 18.83985824055968 37 21.154028971344516 27.139143616787475 34.12847281495936 17.578354596908646 38 20.976369678526634 24.84122595134098 35.093843563735014 19.08856080639737 39 21.60584374364316 24.461681098502776 33.480394612159955 20.452080545694113 40 21.06008829809962 25.992433635872047 34.82163027445192 18.125847791576412 41 18.429749447242447 27.16152991432897 32.988816051077556 21.419904587351027 42 19.858996991649605 24.589252328328275 34.6117715125675 20.939979167454617 43 21.146260210553862 22.57172559510241 34.899317882358474 21.382696311985256 44 21.6637005674262 22.88901814107865 32.82311656105581 22.624164730439333 45 22.058987382919153 22.585627588096212 32.97246076520249 22.38292426378214 46 22.316992017598288 24.247937956223033 34.29304787907719 19.142022147101486 47 17.93479760844832 25.220055260422154 37.68012536326623 19.165021767863294 48 18.73252667700457 23.43068476515343 36.72671441728672 21.110074140555284 49 21.260338329532434 20.95061010327341 36.99678107529871 20.792270491895444 50 19.692684178407546 20.82436774042526 35.93062087731798 23.552327203849217 51 18.673954309464495 20.92638383607097 33.35098341267351 27.048678441791026 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5182.0 1 7390.0 2 9598.0 3 33542.0 4 57486.0 5 35398.0 6 13310.0 7 12805.0 8 12300.0 9 12414.0 10 12528.0 11 12318.0 12 12108.0 13 11609.0 14 11110.0 15 10608.5 16 10107.0 17 9768.5 18 9430.0 19 9241.0 20 9052.0 21 8997.0 22 8942.0 23 9848.5 24 10755.0 25 10874.0 26 11706.0 27 12419.0 28 13664.0 29 14909.0 30 16147.0 31 17385.0 32 18931.0 33 20477.0 34 21968.0 35 23459.0 36 24762.0 37 26065.0 38 27252.0 39 28439.0 40 31219.0 41 33999.0 42 40288.5 43 46578.0 44 53017.5 45 59457.0 46 72334.5 47 85212.0 48 99553.0 49 113894.0 50 111904.0 51 109914.0 52 87501.5 53 65089.0 54 51391.0 55 37693.0 56 31303.0 57 24913.0 58 21893.5 59 18874.0 60 16655.0 61 14436.0 62 12842.5 63 11249.0 64 9566.0 65 7883.0 66 6485.0 67 5087.0 68 4013.5 69 2940.0 70 2493.0 71 2046.0 72 1704.5 73 1363.0 74 1029.0 75 526.5 76 358.0 77 315.0 78 272.0 79 191.5 80 111.0 81 87.5 82 64.0 83 62.5 84 61.0 85 42.0 86 23.0 87 14.0 88 5.0 89 4.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 978277.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.92936103884888 #Duplication Level Percentage of deduplicated Percentage of total 1 71.49047916680304 27.8307867432478 2 11.126912849727688 8.663272151497122 3 4.72180645617602 5.514507248641316 4 2.673098319736531 4.162480383254548 5 1.7928000839943468 3.4896280870147267 6 1.345701057779507 3.1432369397195554 7 1.062402157977283 2.895104602344487 8 0.8890168411342825 2.768708606250675 9 0.7650451494540976 2.6804446950706806 >10 3.9689875130890138 24.43737203223938 >50 0.10655984816890218 2.778830874705444 >100 0.04990685308116509 3.606859735408109 >500 0.003237201279160571 0.8373123500220181 >1k 0.003506968052423951 2.7165130513005824 >5k 2.697667732633809E-4 0.5555477651594728 >10k+ 2.697667732633809E-4 3.919394734124136 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37321 3.8149726508954007 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCC 5290 0.540746639244304 No Hit CCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCCGTCTTCTGC 3764 0.38475810021088097 Illumina PCR Primer Index 5 (96% over 25bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3476 0.35531858563576574 No Hit GCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCCGTCTTCTGC 3235 0.3306834362864506 RNA PCR Primer, Index 33 (96% over 27bp) CTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCCGTCTTCTGCT 2827 0.2889774573050373 Illumina PCR Primer Index 5 (96% over 26bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCCG 1906 0.19483234298670007 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1683 0.1720371632983296 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1508 0.15414856937247837 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1477 0.1509797327341847 No Hit TCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCCGTCTTCTGC 1343 0.1372821808138186 RNA PCR Primer, Index 33 (96% over 27bp) CGCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCCGTCTTCTG 1337 0.1366688575935037 Illumina PCR Primer Index 5 (95% over 24bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGC 1169 0.11949580742468646 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCCGT 1126 0.11510032434576302 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1016 0.1038560653066565 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.31514591470513975 0.0 2 0.0 0.0 0.0 1.3389868104841471 0.0 3 0.0 0.0 0.0 1.9080485383996557 0.0 4 0.0 0.0 0.0 2.598957146084391 0.0 5 0.0 0.0 0.0 4.6594165047323 0.0 6 0.0 0.0 0.0 5.980412500753877 0.0 7 0.0 0.0 0.0 7.2109433217790055 0.0 8 0.0 0.0 0.0 9.064610534644073 0.0 9 0.0 0.0 0.0 9.86233960320032 0.0 10 0.0 0.0 0.0 12.177225877742194 0.0 11 0.0 0.0 0.0 15.822307996610366 0.0 12 0.0 0.0 0.0 18.58952014613448 0.0 13 0.0 0.0 0.0 19.72488364747408 0.0 14 0.0 0.0 0.0 20.231284186380748 0.0 15 0.0 0.0 0.0 21.084927888522373 0.0 16 0.0 0.0 0.0 22.674661675578594 0.0 17 0.0 0.0 0.0 24.59231894442985 0.0 18 0.0 0.0 0.0 26.394467006788467 0.0 19 0.0 0.0 0.0 27.629393310892517 0.0 20 0.0 0.0 0.0 28.921563115559294 0.0 21 0.0 0.0 0.0 30.363690447593065 0.0 22 0.0 0.0 0.0 31.900167335018608 0.0 23 0.0 0.0 0.0 33.08623222257091 0.0 24 0.0 0.0 0.0 33.91237860033508 0.0 25 0.0 0.0 0.0 34.56771446124155 0.0 26 0.0 0.0 0.0 35.1578336197212 0.0 27 0.0 0.0 0.0 35.71759327879527 0.0 28 0.0 0.0 0.0 36.21080736846517 0.0 29 0.0 0.0 0.0 36.67723967751465 0.0 30 0.0 0.0 0.0 37.21430637743707 0.0 31 0.0 0.0 0.0 37.68605415439594 0.0 32 0.0 0.0 0.0 38.071732239437296 0.0 33 0.0 0.0 0.0 38.43185519029886 0.0 34 1.022205367191501E-4 0.0 0.0 38.79453365457841 0.0 35 1.022205367191501E-4 0.0 0.0 39.17111411185176 0.0 36 2.044410734383002E-4 0.0 0.0 39.50731745712104 0.0 37 2.044410734383002E-4 0.0 0.0 39.8492451524466 0.0 38 2.044410734383002E-4 0.0 0.0 40.21570577658475 0.0 39 2.044410734383002E-4 0.0 0.0 40.688169097300666 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 20 7.0327707E-4 45.000004 1 CGACGGT 80 0.0 45.000004 28 CGGGTAT 25 3.8903785E-5 45.0 6 AATTGCG 25 3.8903785E-5 45.0 1 CGGTCTA 85 0.0 45.0 31 TTGCACG 25 3.8903785E-5 45.0 1 CTTACGG 30 2.1651686E-6 44.999996 2 CGTTATT 745 0.0 44.09396 1 CGTTTTT 11835 0.0 43.326996 1 GTATCGG 75 0.0 42.000004 2 TACGGGT 65 0.0 41.53846 4 GGCGTAG 55 6.002665E-11 40.909092 1 TAGCGAG 55 6.002665E-11 40.909092 1 GTTCACG 55 6.002665E-11 40.909092 1 CGCACGG 55 6.002665E-11 40.909092 2 TCGTTAG 50 1.0804797E-9 40.5 1 TTGTGCG 50 1.0804797E-9 40.5 1 TCACGAC 95 0.0 40.263157 25 TATGCGG 90 0.0 40.0 2 TACGCGG 45 1.927765E-8 40.0 2 >>END_MODULE