##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935167.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4337286 Sequences flagged as poor quality 0 Sequence length 51 %GC 31 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22240820642217 33.0 31.0 34.0 30.0 34.0 2 32.38528494547051 34.0 31.0 34.0 31.0 34.0 3 32.253439593330945 34.0 31.0 34.0 30.0 34.0 4 35.94933467610851 37.0 35.0 37.0 35.0 37.0 5 33.37574925886833 37.0 35.0 37.0 30.0 37.0 6 34.475385298548446 37.0 35.0 37.0 29.0 37.0 7 35.764319669028055 37.0 35.0 37.0 32.0 37.0 8 35.78928712563571 37.0 35.0 37.0 35.0 37.0 9 37.93470917066571 39.0 38.0 39.0 35.0 39.0 10 37.553788705656025 39.0 37.0 39.0 35.0 39.0 11 37.418766712640114 39.0 37.0 39.0 35.0 39.0 12 37.63908859134491 39.0 37.0 39.0 35.0 39.0 13 37.63014359671001 39.0 37.0 39.0 35.0 39.0 14 38.858471403545906 40.0 38.0 41.0 35.0 41.0 15 38.98266312159263 40.0 38.0 41.0 35.0 41.0 16 38.93810207581423 40.0 38.0 41.0 35.0 41.0 17 38.8464159384463 40.0 38.0 41.0 35.0 41.0 18 38.34037068341816 39.0 38.0 40.0 35.0 41.0 19 37.711181600659955 38.0 37.0 40.0 34.0 41.0 20 37.07694811916945 38.0 35.0 40.0 34.0 41.0 21 36.931553971769446 37.0 35.0 40.0 33.0 41.0 22 36.89336326910423 37.0 35.0 40.0 33.0 41.0 23 36.72119915541654 37.0 35.0 40.0 33.0 41.0 24 36.43155304953374 37.0 35.0 40.0 33.0 41.0 25 36.23732606058258 36.0 35.0 40.0 33.0 41.0 26 36.46305177938462 37.0 35.0 40.0 33.0 41.0 27 36.379058010009025 37.0 35.0 40.0 33.0 41.0 28 36.338473183460806 37.0 35.0 40.0 33.0 41.0 29 36.2756610931352 37.0 35.0 40.0 33.0 41.0 30 35.87188416904027 36.0 35.0 40.0 31.0 41.0 31 35.42072577183059 36.0 35.0 40.0 30.0 41.0 32 34.5892998524884 36.0 35.0 40.0 21.0 41.0 33 33.58481824809339 36.0 33.0 40.0 15.0 41.0 34 32.68461775405173 36.0 33.0 40.0 10.0 41.0 35 32.04558357461325 36.0 31.0 40.0 8.0 41.0 36 31.668430903565042 36.0 30.0 40.0 7.0 41.0 37 31.520394781437055 36.0 29.0 40.0 7.0 41.0 38 31.374742177481494 36.0 27.0 40.0 7.0 41.0 39 31.18515910640894 36.0 25.0 40.0 7.0 41.0 40 31.034524354630985 36.0 24.0 40.0 7.0 41.0 41 30.846826794451644 35.0 23.0 40.0 7.0 41.0 42 30.764874393802945 35.0 23.0 40.0 7.0 41.0 43 30.63912594189085 35.0 23.0 40.0 7.0 41.0 44 30.50156180616173 35.0 22.0 40.0 7.0 41.0 45 30.47361760326619 35.0 23.0 40.0 7.0 41.0 46 30.409494554889854 35.0 23.0 40.0 7.0 41.0 47 30.372549792658358 35.0 23.0 40.0 7.0 41.0 48 30.298392358723866 35.0 23.0 40.0 7.0 41.0 49 30.254462122165798 35.0 22.0 40.0 7.0 41.0 50 30.183705893501145 35.0 22.0 40.0 7.0 41.0 51 29.551058657418487 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 16.0 9 61.0 10 80.0 11 78.0 12 111.0 13 161.0 14 269.0 15 459.0 16 863.0 17 1565.0 18 3189.0 19 5842.0 20 9970.0 21 15589.0 22 24057.0 23 39479.0 24 71738.0 25 134262.0 26 205755.0 27 226669.0 28 198203.0 29 156537.0 30 127561.0 31 116018.0 32 117191.0 33 134811.0 34 191729.0 35 284892.0 36 364379.0 37 380161.0 38 642011.0 39 883267.0 40 308.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.6384029091003 14.141723649305119 16.739269672325044 44.480603769269536 2 56.53943502918646 15.395249471674221 17.656963363725612 10.408352135413711 3 19.736674039941107 15.908473639967482 54.458041272814384 9.89681104727703 4 17.471432596328672 17.513601823813325 53.387786740371745 11.627178839486259 5 14.91755443380953 25.61023183622201 48.92137617855959 10.550837551408875 6 16.999340140355052 22.290160252286796 51.153509360461825 9.556990246896332 7 52.517680411206456 4.149507318631974 40.43111291254485 2.901699357616722 8 54.135696838991024 3.600684852232479 39.84832911641058 2.4152891923659174 9 49.24000861368146 6.589719930850767 40.93495333256787 3.235318122899897 10 18.88293739449047 29.235471214026465 44.50534274198197 7.376248649501093 11 16.38118860504011 18.33282379810785 53.7717595749969 11.514228021855141 12 16.291109232824397 16.592680307454938 54.33019634859219 12.78601411112848 13 15.377288931373215 16.44961849414588 55.62086521386876 12.552227360612141 14 11.97965732488012 19.18273316539421 55.60269717053475 13.234912339190913 15 11.418223285252575 20.475684564033823 55.83862811905879 12.267464031654818 16 14.304590474319657 20.94023774314168 53.7400577227326 11.015114059806063 17 14.1688373789508 20.57397183399942 53.15268580397973 12.104504983070058 18 13.584854676403632 20.661907008207436 53.762260547263885 11.990977768125044 19 13.191728652433804 21.492656928779887 52.92650749800681 12.389106920779493 20 13.624072749641137 22.37830292952782 52.65218848837729 11.34543583245375 21 13.860672319049286 21.039308913454175 53.99344198192141 11.106576785575127 22 13.795401087223668 18.807452402262616 54.39685093397115 13.000295576542568 23 12.059107930627585 20.483200785007032 54.43443203883719 13.023259245528193 24 12.123825821031863 20.949529267841687 53.76472752776736 13.161917383359087 25 12.995891901064399 21.70811424471432 52.48980583710643 12.80618801711485 26 12.759038716838134 22.23189801179816 52.0612198503857 12.947843420978003 27 12.84842641227717 21.13270833419793 53.101847560894065 12.91701769263083 28 12.132079830566857 21.204366048261516 53.06560369779627 13.597950423375355 29 12.787743303070167 20.94634755466898 52.822940428645936 13.442968713614919 30 13.691442067689334 20.62310394103594 52.50071127428535 13.184742716989382 31 13.566871080210067 21.3345165617393 51.69456199106999 13.404050366980641 32 13.921124869330729 22.308143848480363 50.50453209679971 13.266199185389205 33 14.481959455751822 22.993641645950945 48.078983032246434 14.445415866050798 34 13.865075994527453 24.151439402428153 46.915905476373936 15.067579126670458 35 14.416134882504867 25.19490298772089 44.53679097942815 15.852171150346091 36 15.290483495900432 25.3643637980064 43.02347135973971 16.321681346353458 37 15.167918371073524 26.826914342286855 41.92979204046032 16.075375246179295 38 15.288708192173631 26.775361366531975 41.29238883486125 16.64354160643315 39 15.792848338799887 25.584178677633894 40.879895861144504 17.743077122421717 40 16.702518579591015 25.871224539954245 40.97039023942622 16.455866641028514 41 16.005262276916948 26.511486676230252 40.176114740877125 17.307136305975675 42 16.28018073975292 26.708038160268888 40.25941568068142 16.752365419296765 43 16.59440949939663 26.371744911449234 40.504246203732016 16.529599385422127 44 16.855471370806537 26.24383081954937 39.75377690103904 17.14692090860506 45 16.21550896113376 25.678546445864995 40.23689007365435 17.869054519346893 46 16.2489630612323 25.632895778604407 40.556121961982676 17.562019198180614 47 15.60807841585729 26.015254700750656 41.0944309413767 17.282235942015355 48 15.522010768946295 25.7682108120147 41.13662322475392 17.57315519428509 49 15.886270815436196 25.375799520714104 41.02016791145431 17.717761752395393 50 15.01515002699845 25.07913935119796 41.56751480073023 18.338195821073363 51 14.917485266131864 24.94619907472092 41.090326992501765 19.045988666645457 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 13234.0 1 13204.0 2 13174.0 3 280939.0 4 548704.0 5 347406.0 6 146108.0 7 139580.5 8 133053.0 9 132803.5 10 132554.0 11 130397.0 12 128240.0 13 124350.5 14 120461.0 15 113314.5 16 106168.0 17 98551.5 18 90935.0 19 84780.0 20 78625.0 21 74261.5 22 69898.0 23 66527.5 24 63157.0 25 63588.0 26 64848.5 27 65678.0 28 71496.0 29 77314.0 30 84212.0 31 91110.0 32 98254.5 33 105399.0 34 111880.5 35 118362.0 36 123543.5 37 128725.0 38 138016.5 39 147308.0 40 151836.5 41 156365.0 42 167214.0 43 178063.0 44 190462.5 45 202862.0 46 224912.0 47 246962.0 48 248123.5 49 249285.0 50 235241.0 51 221197.0 52 191136.0 53 161075.0 54 140553.5 55 120032.0 56 109309.0 57 98586.0 58 87859.5 59 77133.0 60 70557.5 61 63982.0 62 54834.0 63 45686.0 64 37264.0 65 28842.0 66 23646.5 67 18451.0 68 14609.5 69 10768.0 70 8675.0 71 6582.0 72 5470.5 73 4359.0 74 3363.0 75 1780.0 76 1193.0 77 924.5 78 656.0 79 520.0 80 384.0 81 258.0 82 132.0 83 84.0 84 36.0 85 33.0 86 30.0 87 19.0 88 8.0 89 8.0 90 8.0 91 7.5 92 7.0 93 4.0 94 1.0 95 3.0 96 5.0 97 3.0 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4337286.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.089259679108466 #Duplication Level Percentage of deduplicated Percentage of total 1 79.39882217047678 23.096529563323532 2 7.6237754248270715 4.435399661360003 3 2.8610772219776 2.4967985481626602 4 1.6519378348997507 1.922145946125722 5 1.07958151102374 1.5702113459466933 6 0.8171142187311454 1.4261548617697273 7 0.6340497256428508 1.2910825983084655 8 0.5370047789746679 1.249685717161309 9 0.45020663954088724 1.1786560062177285 >10 4.075440822527347 25.62425757488199 >50 0.6840031076124602 13.682005448337687 >100 0.1757630098925981 7.794662221416942 >500 0.00750986457722317 1.4496142598326272 >1k 0.0027233574837032897 1.6514343653632912 >5k 6.602078748371612E-4 1.492537341518373 >10k+ 3.301039374185806E-4 9.638824540273237 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 364486 8.40355005411218 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTT 14244 0.32840813356555226 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCT 11856 0.2733506621421783 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10928 0.2519547938503479 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGT 9879 0.22776916255925939 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCC 9769 0.2252330143781157 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTC 8949 0.20632718248231727 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTC 8949 0.20632718248231727 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCG 7782 0.1794209558696383 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 5688 0.13114191685768475 No Hit CGCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTG 5645 0.13015051347778311 TruSeq Adapter, Index 20 (95% over 21bp) CGTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCT 5512 0.12708407976785482 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 4375 0.1008695299318514 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0750303300266573E-4 0.0 0.0 0.0765455632854278 0.0 2 2.0750303300266573E-4 0.0 0.0 0.2700075577215798 0.0 3 2.0750303300266573E-4 0.0 0.0 0.49067550537363686 0.0 4 2.0750303300266573E-4 0.0 0.0 0.7598299950706502 0.0 5 2.0750303300266573E-4 0.0 0.0 1.3742695316840992 0.0 6 2.0750303300266573E-4 0.0 0.0 2.229089804084859 0.0 7 2.0750303300266573E-4 0.0 0.0 2.9335626011289087 0.0 8 2.0750303300266573E-4 0.0 0.0 3.7248638895382964 0.0 9 2.0750303300266573E-4 0.0 0.0 4.288165456462867 0.0 10 2.0750303300266573E-4 0.0 0.0 4.991139620490786 0.0 11 2.0750303300266573E-4 0.0 0.0 5.78774376418802 0.0 12 2.0750303300266573E-4 0.0 0.0 6.320496273476087 0.0 13 2.0750303300266573E-4 0.0 0.0 6.5982967228815435 0.0 14 2.0750303300266573E-4 0.0 0.0 6.773567618091129 0.0 15 2.0750303300266573E-4 0.0 0.0 6.944227334789543 0.0 16 2.3055892555851748E-4 0.0 0.0 7.190625658533931 0.0 17 2.3055892555851748E-4 0.0 0.0 7.506030268697983 0.0 18 2.3055892555851748E-4 0.0 0.0 7.838542351138477 0.0 19 2.536148181143692E-4 0.0 0.0 8.06734902886275 0.0 20 2.536148181143692E-4 0.0 0.0 8.324745013356278 0.0 21 2.536148181143692E-4 0.0 0.0 8.592216422896715 0.0 22 2.76670710670221E-4 0.0 0.0 8.877118087209375 0.0 23 2.76670710670221E-4 0.0 0.0 9.137326890594718 0.0 24 2.76670710670221E-4 0.0 0.0 9.332771691790672 0.0 25 2.997266032260727E-4 0.0 0.0 9.50486087382755 0.0 26 2.997266032260727E-4 0.0 0.0 9.66549127726417 0.0 27 2.997266032260727E-4 0.0 0.0 9.841084954969537 0.0 28 2.997266032260727E-4 0.0 0.0 10.017900594980363 0.0 29 2.997266032260727E-4 0.0 0.0 10.19928130171725 0.0 30 2.997266032260727E-4 0.0 0.0 10.397792536623133 0.0 31 3.2278249578192444E-4 0.0 0.0 10.568175582610877 0.0 32 3.2278249578192444E-4 0.0 0.0 10.74985601595099 0.0 33 3.2278249578192444E-4 0.0 0.0 10.911385599197287 0.0 34 3.2278249578192444E-4 0.0 0.0 11.070886263898668 0.0 35 3.2278249578192444E-4 0.0 0.0 11.235320889607003 0.0 36 3.6889428089362795E-4 0.0 0.0 11.38617559459994 0.0 37 3.6889428089362795E-4 0.0 0.0 11.544661800028866 2.3055892555851747E-5 38 3.6889428089362795E-4 0.0 0.0 11.733697063094294 2.3055892555851747E-5 39 3.6889428089362795E-4 0.0 0.0 12.034553405055604 2.3055892555851747E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 144335 0.0 44.57287 1 CGTTATT 10925 0.0 44.505722 1 CGGTCTA 580 0.0 42.672417 31 TAGTACG 145 0.0 41.896553 1 CGACGGT 615 0.0 40.609756 28 GTTATTT 12265 0.0 40.010193 2 GTTTTTT 161920 0.0 39.690437 2 TCACGAC 635 0.0 38.97638 25 CGCATCG 145 0.0 38.793106 21 CGTAAGG 410 0.0 38.414635 2 CGTTCTG 1220 0.0 38.17623 1 CTCACGA 660 0.0 37.840908 24 CGTTTCT 1895 0.0 37.51979 1 AATCGGC 30 1.1404443E-4 37.499996 28 CGTTTTC 1650 0.0 37.36364 1 ACGGTCT 665 0.0 37.21805 30 TACGGGA 1780 0.0 36.910114 4 GCCGCAT 165 0.0 36.81818 19 CGCCGCA 160 0.0 36.5625 18 ATGGGCG 575 0.0 35.217392 5 >>END_MODULE