##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935165.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1448036 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.564800875116365 31.0 31.0 34.0 30.0 34.0 2 31.663397180733075 31.0 31.0 34.0 30.0 34.0 3 31.690961412561567 31.0 31.0 34.0 30.0 34.0 4 35.517441555320445 37.0 35.0 37.0 33.0 37.0 5 33.070631531260275 37.0 35.0 37.0 28.0 37.0 6 34.04767422909375 36.0 35.0 37.0 28.0 37.0 7 35.37644160780533 37.0 35.0 37.0 32.0 37.0 8 35.37398863011693 37.0 35.0 37.0 33.0 37.0 9 37.35760782190498 39.0 37.0 39.0 34.0 39.0 10 36.72371819485151 39.0 37.0 39.0 32.0 39.0 11 36.70190658243303 39.0 37.0 39.0 32.0 39.0 12 37.04583035228406 39.0 37.0 39.0 33.0 39.0 13 37.00086116643509 39.0 37.0 39.0 33.0 39.0 14 37.804945457157146 39.0 37.0 41.0 33.0 41.0 15 37.94591087514399 39.0 37.0 41.0 33.0 41.0 16 37.92774834327324 39.0 37.0 41.0 33.0 41.0 17 37.950340323030645 39.0 37.0 41.0 33.0 41.0 18 37.909535398291204 39.0 37.0 40.0 33.0 41.0 19 37.79211083149866 39.0 37.0 40.0 33.0 41.0 20 37.66848407083802 39.0 36.0 40.0 33.0 41.0 21 37.58383286050899 39.0 36.0 40.0 33.0 41.0 22 37.55075633478726 39.0 36.0 40.0 33.0 41.0 23 37.13052576040927 39.0 35.0 40.0 32.0 41.0 24 36.81963639025549 39.0 35.0 40.0 31.0 41.0 25 36.42664754191194 38.0 35.0 40.0 31.0 41.0 26 36.61934993328895 38.0 35.0 40.0 31.0 41.0 27 36.521404163984876 38.0 35.0 40.0 31.0 41.0 28 36.430460983014235 38.0 35.0 40.0 31.0 41.0 29 36.55838666994467 38.0 35.0 40.0 31.0 41.0 30 36.273723857694144 38.0 35.0 40.0 30.0 41.0 31 35.89196539312559 38.0 35.0 40.0 30.0 41.0 32 35.755344480385844 38.0 35.0 40.0 29.0 41.0 33 35.59104884132715 38.0 35.0 40.0 27.0 41.0 34 35.64916963390413 38.0 35.0 40.0 27.0 41.0 35 35.62059921162181 38.0 35.0 40.0 27.0 41.0 36 35.558905303459305 38.0 35.0 40.0 27.0 41.0 37 35.539420290655755 38.0 35.0 40.0 27.0 41.0 38 35.4923075116917 38.0 35.0 40.0 26.0 41.0 39 35.48068141952272 38.0 35.0 40.0 26.0 41.0 40 35.367318215845465 38.0 35.0 40.0 25.0 41.0 41 35.172750539351235 38.0 34.0 40.0 25.0 41.0 42 35.299759812601344 38.0 35.0 40.0 25.0 41.0 43 35.159222560765066 38.0 34.0 40.0 25.0 41.0 44 35.16307191257676 38.0 35.0 40.0 25.0 41.0 45 35.210597664698945 38.0 35.0 40.0 24.0 41.0 46 35.165198240927715 38.0 35.0 40.0 24.0 41.0 47 35.188194906756465 38.0 35.0 40.0 25.0 41.0 48 35.277646412105774 38.0 35.0 40.0 25.0 41.0 49 35.422585488206096 39.0 35.0 40.0 26.0 41.0 50 35.41828725252687 39.0 35.0 40.0 26.0 41.0 51 34.34790364327959 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 12.0 10 21.0 11 29.0 12 23.0 13 29.0 14 50.0 15 83.0 16 137.0 17 265.0 18 495.0 19 896.0 20 1612.0 21 2676.0 22 4398.0 23 6484.0 24 9640.0 25 13661.0 26 18097.0 27 20803.0 28 22810.0 29 25329.0 30 29946.0 31 37626.0 32 49201.0 33 66644.0 34 89882.0 35 125497.0 36 178014.0 37 258325.0 38 316957.0 39 168329.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.37363711951913 23.70017043775155 23.831866058578655 17.09432638415067 2 33.76697816905105 24.298705280807937 26.30528522771533 15.629031322425686 3 27.65649472803162 24.194149869202146 33.72112295550663 14.428232447259598 4 25.484034927308436 25.123201356872343 32.804640216127225 16.588123499692 5 18.846699943924047 33.29903400191708 30.390749953730435 17.463516100428443 6 22.92332511070167 31.195702316793227 31.966125151584627 13.914847420920474 7 71.04236358764561 5.707731023261853 16.92223121524603 6.327674173846506 8 67.7671687720471 4.946838338273358 18.580891635290836 8.705101254388703 9 61.23701344441713 8.656967091978377 21.066741434605216 9.039278028999279 10 23.318135736956815 36.490322063816095 26.5987862180222 13.592755981204888 11 18.0963732945866 22.905231637887454 37.406942921308584 21.59145214621736 12 19.784521931775174 19.42244529832131 40.44858000767937 20.344452762224144 13 20.524420663574663 20.76813007411418 43.02365410804704 15.683795154264121 14 15.512045280642194 25.696598703347156 38.725625605993216 20.06573041001743 15 12.053291492752942 25.991066520445628 42.96039601225384 18.995245974547593 16 13.917264487899473 27.56664889546945 36.61007046786129 21.906016148769783 17 13.39945968194161 26.6797924913469 35.840407282691864 24.080340544019624 18 13.585228544041723 25.527058719534594 40.809551696228546 20.078161040195134 19 13.332955810490898 27.246145814054344 37.76674060589654 21.654157769558218 20 13.30574654221304 29.48289959641887 38.07792071467836 19.133433146689725 21 13.631429052868851 28.65453621318807 39.570701280907386 18.143333453035698 22 12.319859451008124 24.956838089660753 35.91775342601979 26.805549033311326 23 11.52236546605195 26.431939537414816 37.81881113452981 24.226883862003433 24 15.639183003737475 23.94519197036538 35.375294536876154 25.040330489020988 25 12.511981746310175 28.3432870453497 33.720225187771575 25.42450602056855 26 11.970904038297391 26.652099809673242 37.085542072158425 24.29145407987094 27 15.32600018231591 25.055454422403862 36.22285633782585 23.395689057454373 28 10.50105107884058 23.80507114464005 38.41313337513708 27.280744401382286 29 13.257474261689625 21.457546635580886 38.1029891522034 27.18198995052609 30 15.86500611863241 23.445204400995557 35.23807419152563 25.45171528884641 31 12.473723028985468 26.75064708335981 34.171180826996014 26.604449060658713 32 12.489744730103396 24.745033963244005 33.96655884245972 28.79866246419288 33 12.83331353640379 22.061053730708352 33.74812504661486 31.357507686272996 34 11.918281037211782 19.362225801016 37.35577016041038 31.363723001361844 35 10.973069730310572 19.819327696272744 36.747497990381454 32.460104583035225 36 12.598858039441009 20.069114303788027 37.41177705526658 29.920250601504385 37 12.137612600791693 20.80873679936134 37.07228273330221 29.981367866544755 38 12.463502288617134 21.067846379509902 36.36808753373535 30.100563798137614 39 16.395448731937602 17.841407257830607 34.77054437873092 30.992599631500873 40 16.38619481836087 17.647972840454244 38.87327386888171 27.092558472303175 41 14.063945923996366 20.070288307749255 33.960274468314324 31.90549129994006 42 15.691598827653456 18.05963387650583 37.44603034731181 28.802736948528906 43 17.57200787825717 17.09432638415067 35.43751674682121 29.89614899077095 44 16.75780160161764 17.461029974392904 33.96262247623678 31.81854594775268 45 17.561718078832296 14.762616399039802 34.41544270998788 33.26022281214003 46 20.06724970926137 16.603454610244498 36.60081655428456 26.72847912620957 47 12.613774795654251 17.8927181368419 40.92833327348215 28.565173794021696 48 13.789021819899505 17.01442505573066 38.36838310649735 30.828170017872488 49 17.70404879436699 13.714368979776745 39.95321939509791 28.628362830758352 50 16.589021267427054 13.089867931460267 38.28613377015488 32.0349770309578 51 15.933719879892488 13.161827468377856 33.08398409984282 37.82046855188683 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5667.0 1 7553.0 2 9439.0 3 23700.5 4 37962.0 5 23998.0 6 10034.0 7 9896.0 8 9758.0 9 10105.5 10 10453.0 11 10702.0 12 10951.0 13 10662.0 14 10373.0 15 9982.5 16 9592.0 17 9390.5 18 9189.0 19 9233.5 20 9278.0 21 10331.0 22 11384.0 23 11575.0 24 11766.0 25 12219.0 26 13637.5 27 14603.0 28 15315.0 29 16027.0 30 17957.0 31 19887.0 32 22000.5 33 24114.0 34 26447.5 35 28781.0 36 30370.5 37 31960.0 38 35321.5 39 38683.0 40 45436.5 41 52190.0 42 63376.5 43 74563.0 44 92312.0 45 110061.0 46 144409.5 47 178758.0 48 210994.5 49 243231.0 50 227808.0 51 212385.0 52 161048.5 53 109712.0 54 79709.0 55 49706.0 56 37206.5 57 24707.0 58 20396.5 59 16086.0 60 13608.5 61 11131.0 62 9752.0 63 8373.0 64 6958.5 65 5544.0 66 4529.5 67 3515.0 68 2925.5 69 2336.0 70 1823.0 71 1310.0 72 1103.0 73 896.0 74 655.5 75 339.5 76 264.0 77 207.0 78 150.0 79 109.0 80 68.0 81 54.5 82 41.0 83 25.5 84 10.0 85 7.0 86 4.0 87 2.5 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1448036.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.209434919231214 #Duplication Level Percentage of deduplicated Percentage of total 1 66.67916545925296 21.476982403284577 2 12.23123100194341 7.879220778783588 3 5.724472078441135 5.531460325725178 4 3.410064339533615 4.393449816583965 5 2.231329502371025 3.593493119499004 6 1.6016917504295791 3.095375171767863 7 1.2354669635358704 2.785558492980817 8 1.0153388531937193 2.6162792570327964 9 0.7877432257600696 2.28354877468658 >10 4.755553844851603 26.216159660045374 >50 0.2135809251585158 4.720196827331879 >100 0.09669996713831609 5.744539706850061 >500 0.01059725303412659 2.4383871311915466 >1k 0.005960954831696207 3.323289127707954 >5k 6.623283146329119E-4 1.3933437576135073 >10k+ 4.415522097552746E-4 2.5087156489153273 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24040 1.660179719288747 No Hit CCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 11239 0.7761547364844521 TruSeq Adapter, Index 16 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 7810 0.5393512315992144 TruSeq Adapter, Index 16 (95% over 24bp) CTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGCT 6748 0.4660105135507681 TruSeq Adapter, Index 27 (95% over 24bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCC 5036 0.34778140874950625 No Hit TCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 4456 0.3077271559546862 TruSeq Adapter, Index 16 (95% over 24bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3888 0.26850161183837973 No Hit CGCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTG 3608 0.24916507600639765 TruSeq Adapter, Index 27 (95% over 22bp) ACTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 3575 0.24688612714048544 TruSeq Adapter, Index 27 (95% over 23bp) ACCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTG 2252 0.15552099533437014 TruSeq Adapter, Index 27 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTG 1943 0.13418174686264706 TruSeq Adapter, Index 16 (95% over 23bp) AGCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTG 1855 0.12810454988688125 TruSeq Adapter, Index 27 (95% over 22bp) CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1655 0.11429273857832263 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCG 1573 0.10862989594181359 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTC 1535 0.10600565179318747 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5058575891759597 0.0 2 0.0 0.0 0.0 2.5402683358701026 0.0 3 0.0 0.0 0.0 3.7347137778342527 0.0 4 0.0 0.0 0.0 5.267410478745004 0.0 5 0.0 0.0 0.0 9.397487355286748 0.0 6 0.0 0.0 0.0 11.698880414575328 0.0 7 0.0 0.0 0.0 14.090395542652255 0.0 8 0.0 0.0 0.0 17.63878798593405 0.0 9 0.0 0.0 0.0 18.918797598954722 0.0 10 0.0 0.0 0.0 22.51587667709919 0.0 11 0.0 0.0 0.0 27.55304426133052 0.0 12 0.0 0.0 0.0 31.7335342491485 0.0 13 6.905905654279313E-5 0.0 0.0 33.30953097851158 0.0 14 6.905905654279313E-5 0.0 0.0 33.990798571306236 0.0 15 6.905905654279313E-5 0.0 0.0 35.206168907402855 0.0 16 6.905905654279313E-5 0.0 0.0 37.50189912405493 0.0 17 6.905905654279313E-5 0.0 0.0 40.38884392376985 0.0 18 6.905905654279313E-5 0.0 0.0 43.28587134574002 0.0 19 1.3811811308558626E-4 0.0 0.0 45.10350571394634 0.0 20 1.3811811308558626E-4 0.0 0.0 47.15476687043692 0.0 21 2.762362261711725E-4 0.0 0.0 49.375775187909696 0.0 22 2.762362261711725E-4 0.0 0.0 51.74505329977984 0.0 23 2.762362261711725E-4 0.0 0.0 53.592383062299554 0.0 24 2.762362261711725E-4 0.0 0.0 54.86679889174026 0.0 25 2.762362261711725E-4 0.0 0.0 55.843293951255355 0.0 26 3.4529528271396565E-4 0.0 0.0 56.67953006693204 0.0 27 3.4529528271396565E-4 0.0 0.0 57.4752285164181 0.0 28 3.4529528271396565E-4 0.0 0.0 58.165680963732946 0.0 29 3.4529528271396565E-4 0.0 0.0 58.81849622523197 0.0 30 3.4529528271396565E-4 0.0 0.0 59.523382015364255 0.0 31 3.4529528271396565E-4 0.0 0.0 60.06515031394247 0.0 32 3.4529528271396565E-4 0.0 0.0 60.5306083550409 0.0 33 3.4529528271396565E-4 0.0 0.0 60.9435815131668 0.0 34 4.1435433925675883E-4 0.0 0.0 61.34944158846879 0.0 35 4.1435433925675883E-4 0.0 0.0 61.76262192376433 0.0 36 4.1435433925675883E-4 0.0 0.0 62.12739186042336 0.0 37 5.52472452342345E-4 0.0 0.0 62.49644345858805 0.0 38 5.52472452342345E-4 0.0 0.0 62.84629663903384 0.0 39 5.52472452342345E-4 0.0 0.0 63.283785762232434 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 30 2.1658943E-6 45.000004 1 TCGATAG 30 2.1658943E-6 45.000004 1 GCTAGCG 35 1.2122291E-7 45.000004 1 GGCGCGA 60 0.0 45.000004 8 CTCCGCG 20 7.0338947E-4 45.0 40 CGATTAT 20 7.0338947E-4 45.0 10 AGCGCTA 25 3.8913106E-5 45.0 45 GGACGAT 25 3.8913106E-5 45.0 8 ATGCGTG 20 7.0338947E-4 45.0 10 TACTACG 25 3.8913106E-5 45.0 1 CCGAACC 20 7.0338947E-4 45.0 18 CGGGTAT 65 0.0 44.999996 6 CGTTAGG 205 0.0 43.90244 2 CGTTTTT 8025 0.0 43.514023 1 ACGGGTA 120 0.0 43.125004 5 GCGTAAG 110 0.0 42.954544 1 TACGTAG 90 0.0 42.5 1 CGTTATT 630 0.0 42.499996 1 TATAGCG 75 0.0 42.0 1 CGGTCTA 150 0.0 42.0 31 >>END_MODULE