##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935161.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 173624 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.239419665484036 33.0 31.0 34.0 31.0 34.0 2 32.366614062572 34.0 31.0 34.0 31.0 34.0 3 32.337528221904805 34.0 31.0 34.0 31.0 34.0 4 36.03361286458093 37.0 35.0 37.0 35.0 37.0 5 33.203750633552964 37.0 35.0 37.0 30.0 37.0 6 34.409499838731975 37.0 35.0 37.0 29.0 37.0 7 35.66782818043588 37.0 35.0 37.0 32.0 37.0 8 35.735491637100864 37.0 35.0 37.0 35.0 37.0 9 37.902870570888815 39.0 38.0 39.0 35.0 39.0 10 37.427567617380085 39.0 37.0 39.0 34.0 39.0 11 37.255765331981756 39.0 37.0 39.0 34.0 39.0 12 37.58207966640557 39.0 37.0 39.0 35.0 39.0 13 37.53834723310141 39.0 37.0 39.0 35.0 39.0 14 38.70299036999493 40.0 38.0 41.0 35.0 41.0 15 38.841294982260514 40.0 38.0 41.0 35.0 41.0 16 38.82812859973276 40.0 38.0 41.0 35.0 41.0 17 38.76230244666636 40.0 38.0 41.0 35.0 41.0 18 38.47030940422983 39.0 38.0 41.0 35.0 41.0 19 38.098863060406394 39.0 37.0 41.0 35.0 41.0 20 37.76067248767451 39.0 35.0 41.0 34.0 41.0 21 37.69117172741096 39.0 35.0 41.0 34.0 41.0 22 37.610088467032206 39.0 35.0 41.0 34.0 41.0 23 37.33299543841865 39.0 35.0 40.0 33.0 41.0 24 37.09899553057181 39.0 35.0 40.0 33.0 41.0 25 36.91345090540478 38.0 35.0 40.0 33.0 41.0 26 37.166791457402205 39.0 35.0 40.0 33.0 41.0 27 37.035957010551535 39.0 35.0 40.0 33.0 41.0 28 37.08305303414274 39.0 35.0 40.0 33.0 41.0 29 37.0824713173294 39.0 35.0 40.0 33.0 41.0 30 36.73754204487859 39.0 35.0 40.0 33.0 41.0 31 36.4972872413952 39.0 35.0 40.0 33.0 41.0 32 36.118998525549465 39.0 35.0 41.0 31.0 41.0 33 35.68124222457725 39.0 35.0 41.0 27.0 41.0 34 35.397473851541264 39.0 35.0 41.0 23.0 41.0 35 35.055810256646545 39.0 35.0 41.0 21.0 41.0 36 34.78006496797678 39.0 35.0 41.0 18.0 41.0 37 34.70425747592499 39.0 35.0 41.0 18.0 41.0 38 34.594808321430214 39.0 35.0 41.0 18.0 41.0 39 34.480210109201494 39.0 35.0 40.0 16.0 41.0 40 34.37433188960052 39.0 35.0 40.0 15.0 41.0 41 34.17924365295121 38.0 35.0 40.0 15.0 41.0 42 34.09272335621804 38.0 35.0 40.0 14.0 41.0 43 33.96958945767866 38.0 35.0 40.0 12.0 41.0 44 33.881012993595355 38.0 34.0 40.0 10.0 41.0 45 33.89042989448463 38.0 34.0 40.0 10.0 41.0 46 33.74199995392342 38.0 34.0 40.0 10.0 41.0 47 33.611856655761876 38.0 34.0 40.0 10.0 41.0 48 33.53060636778326 38.0 34.0 40.0 10.0 41.0 49 33.50540823849237 38.0 34.0 40.0 10.0 41.0 50 33.42427890153435 38.0 34.0 40.0 10.0 41.0 51 32.54146316177487 36.0 32.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 5.0 11 8.0 12 6.0 13 6.0 14 10.0 15 16.0 16 17.0 17 41.0 18 71.0 19 111.0 20 233.0 21 433.0 22 729.0 23 1175.0 24 1985.0 25 3135.0 26 4385.0 27 4562.0 28 4057.0 29 3266.0 30 3046.0 31 3156.0 32 3587.0 33 4885.0 34 8414.0 35 14160.0 36 17472.0 37 21146.0 38 36842.0 39 36654.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.760148366585266 22.494586001935215 22.265930977284246 24.479334654195274 2 40.239252637884164 23.56701838455513 22.285513523476016 13.908215454084688 3 23.825047228493755 24.076164585541168 39.27625213104179 12.822536054923283 4 21.852393678293325 24.697622448509424 39.215776620743675 14.23420725245358 5 16.137169976500946 32.63028152789937 36.70057134958301 14.531977146016681 6 19.360226696770034 31.481246832235176 37.77069990323918 11.38782656775561 7 59.391558770676866 9.68068930562595 26.3782656775561 4.549486246141086 8 58.743606874625634 8.649149887112381 26.550476892595494 6.056766345666498 9 53.6129797723817 11.532967792471087 28.616435515827305 6.23761691931991 10 24.738515412615765 27.992673823895313 35.4207943602267 11.848016403262223 11 17.332281251439895 25.89273372344837 39.954153803621615 16.820831221490117 12 18.008455052296917 22.040731696078883 43.837257522001565 16.113555729622632 13 17.493549278901536 24.384877666682026 44.59579320831221 13.525779846104225 14 13.3731511772566 26.955950790213336 43.04934801640326 16.6215500161268 15 11.694811777173662 26.400152052711608 45.854835736994886 16.050200433119848 16 12.361770262175737 27.47373634981339 42.7538819518039 17.410611436206977 17 12.535709348937935 27.328019167856976 40.42067916877851 19.715592314426576 18 12.350251117357047 27.169630926600007 44.448924111873936 16.03119384416901 19 12.802377551490576 27.61426991660139 42.68073538220523 16.902617149702806 20 13.427291157904437 30.40075104824218 41.54034004515505 14.631617748698336 21 13.52232410265862 28.34573561258812 43.16684329355389 14.965096991199372 22 12.019075703819748 27.47373634981339 40.675828226512465 19.831359719854397 23 11.266299589918445 27.845228770216103 40.9759019490393 19.912569690826153 24 13.540754734368521 27.467400820163114 40.269778371653686 18.72206607381468 25 11.469612495968299 29.722849375662353 38.939317145095146 19.868220983274202 26 11.528360134543611 29.90254803483389 41.20801271713588 17.361079113486618 27 13.357024374510438 29.566764963369117 40.67870801271714 16.397502649403307 28 10.322305672026909 28.65444869372898 41.61809427268119 19.40515136156292 29 11.908491913560336 26.056881537114684 41.89109800488412 20.143528544440862 30 15.675828226512465 29.61917707229415 37.717135879832284 16.9878588213611 31 13.228009952541123 30.9196885223241 36.755863244712714 19.096438280422063 32 14.9270838132977 29.688867898447217 34.769386720729855 20.61466156752523 33 16.480440492097866 30.028106713357598 33.42049486246141 20.07095793208312 34 14.6293139197346 27.06365479426807 36.01115053218449 22.295880753812835 35 15.676980140994331 28.62507487444132 34.23086670045616 21.467078284108187 36 16.36812883011565 32.64928811685021 33.84555130627102 17.13703174676312 37 15.360203658480396 29.61917707229415 36.26399576095471 18.756623508270746 38 16.922199695894577 29.687140026724418 31.795719485785373 21.594940791595633 39 19.87052481223794 26.969773763995764 32.238054646823024 20.921646776943277 40 20.58759157720131 25.849536930378285 32.79903699949316 20.763834492927245 41 18.492835091922778 29.535087315117725 31.162742477998435 20.809335114961065 42 17.871377228954522 29.89045293277427 33.537990139612035 18.700179698659174 43 17.87656084412293 28.665391881306736 34.77169054969359 18.686356724876745 44 17.33861678109017 26.521103073307838 32.95684928350919 23.1834308620928 45 19.21220568584988 24.358959590839977 32.8382020918767 23.590632631433444 46 20.35144910841819 26.299935492789018 33.5690918306225 19.779523568170298 47 16.087637653780583 27.895337050177393 36.704027093028614 19.31299820301341 48 16.793761231166197 26.598857300833984 35.5428972953048 21.064484172695018 49 18.81249136064139 24.746578813988847 36.473068239413905 19.96786158595586 50 17.865041699304243 22.936345205731925 35.06658065705202 24.13203243791181 51 17.513131825093307 22.69271529281666 32.39010735842971 27.404045523660326 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3048.0 1 3204.0 2 3360.0 3 7311.0 4 11262.0 5 7191.0 6 3120.0 7 3135.0 8 3150.0 9 3244.5 10 3339.0 11 3560.0 12 3781.0 13 3722.0 14 3663.0 15 3462.0 16 3261.0 17 2863.5 18 2466.0 19 2370.0 20 2274.0 21 2263.0 22 2252.0 23 2279.5 24 2307.0 25 2211.5 26 2218.0 27 2320.0 28 2172.5 29 2025.0 30 2227.5 31 2430.0 32 2662.5 33 2895.0 34 3179.0 35 3463.0 36 3537.0 37 3611.0 38 3834.5 39 4058.0 40 4685.5 41 5313.0 42 6765.0 43 8217.0 44 9119.0 45 10021.0 46 12048.0 47 14075.0 48 16408.0 49 18741.0 50 18237.5 51 17734.0 52 14144.0 53 10554.0 54 8157.0 55 5760.0 56 4595.0 57 3430.0 58 3024.5 59 2619.0 60 2410.0 61 2201.0 62 1917.5 63 1634.0 64 1331.0 65 1028.0 66 879.5 67 731.0 68 616.0 69 501.0 70 406.5 71 312.0 72 255.0 73 198.0 74 185.5 75 130.0 76 87.0 77 63.5 78 40.0 79 36.0 80 32.0 81 22.5 82 13.0 83 10.5 84 8.0 85 4.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 173624.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.54298944846335 #Duplication Level Percentage of deduplicated Percentage of total 1 79.27054117173795 40.85840667188868 2 9.262383926875328 9.548219140211032 3 3.4305125655093813 5.304566189006128 4 2.0929478942016515 4.315071649080772 5 1.3532087025510946 3.487421093857992 6 0.9699299370886458 2.9995853107865273 7 0.7542657920908248 2.721397963415196 8 0.6157043725067325 2.5388195180389808 9 0.43691544401112964 2.02679353084827 >10 1.7152562827546907 13.217642722204303 >50 0.06369355577655854 2.1592636962631895 >100 0.02681833927434044 2.84926047090264 >500 0.003352292409292555 1.2112380776851126 >1k 0.003352292409292555 2.7392526378841637 >5k 0.0011174308030975182 4.023061327927015 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6985 4.023061327927015 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2549 1.4681150071418698 No Hit CCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTGC 1116 0.6427682808828272 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCC 1091 0.6283693498594665 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 893 0.5143298161544487 No Hit GCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTGC 688 0.39625858176288986 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 522 0.300649679767774 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 476 0.2741556466847901 No Hit CTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTGCT 400 0.23038289637377318 Illumina Single End Adapter 1 (95% over 21bp) TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 367 0.2113763074229369 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCG 348 0.2004331198451827 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 299 0.17221121503939546 No Hit TCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTGC 266 0.15320462608855917 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGC 229 0.13189420817398517 No Hit ACTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTGC 220 0.12671059300557527 No Hit ACTTAAGGGTTATTTATTTATTTATTTATTTATTTATTTATTTATTGGATA 195 0.11231166198221443 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 195 0.11231166198221443 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGT 193 0.11115974750034559 No Hit GCCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTG 188 0.10827996129567341 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2442058701561996 0.0 2 0.0 0.0 0.0 1.634566649771921 0.0 3 0.0 0.0 0.0 2.3193798092429616 0.0 4 0.0 0.0 0.0 3.1476063217066765 0.0 5 0.0 0.0 0.0 5.402478919964982 0.0 6 0.0 0.0 0.0 6.67419250794821 0.0 7 0.0 0.0 0.0 7.992558632447127 0.0 8 0.0 0.0 0.0 9.8638437082431 0.0 9 0.0 0.0 0.0 10.641961940745519 0.0 10 0.0 0.0 0.0 12.782219048057872 0.0 11 0.0 0.0 0.0 16.59390406856195 0.0 12 0.0 0.0 0.0 19.077431691471226 0.0 13 0.0 0.0 0.0 20.1291296134175 0.0 14 0.0 0.0 0.0 20.515596922084505 0.0 15 0.0 0.0 0.0 21.307538128369348 0.0 16 0.0 0.0 0.0 22.842464175459614 0.0 17 0.0 0.0 0.0 24.673432244390177 0.0 18 0.0 0.0 0.0 26.48481776712897 0.0 19 0.0 0.0 0.0 27.575680781458786 0.0 20 0.0 0.0 0.0 28.68958208542598 0.0 21 0.0 0.0 0.0 30.010252038888634 0.0 22 0.0 0.0 0.0 31.207091185550386 0.0 23 0.0 0.0 0.0 32.37570842740635 0.0 24 0.0 0.0 0.0 33.108901995115886 0.0 25 0.0 0.0 0.0 33.743030917384694 0.0 26 0.0 0.0 0.0 34.22798691425149 0.0 27 0.0 0.0 0.0 34.68644887803529 0.0 28 0.0 0.0 0.0 35.121296594940794 0.0 29 0.0 0.0 0.0 35.54923282495508 0.0 30 0.0 0.0 0.0 36.05665115421831 0.0 31 0.0 0.0 0.0 36.42699166013915 0.0 32 0.0 0.0 0.0 36.773141961940745 0.0 33 0.0 0.0 0.0 37.10892503340552 0.0 34 0.0 0.0 0.0 37.42858130212413 0.0 35 0.0 0.0 0.0 37.756300972215826 0.0 36 0.0 0.0 0.0 38.0235451320094 0.0 37 0.0 0.0 0.0 38.308643966271944 0.0 38 0.0 0.0 0.0 38.61044556052159 0.0 39 0.0 0.0 0.0 38.876537805833294 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGCTG 35 1.2039709E-7 45.000004 6 CGCAGGG 35 1.2039709E-7 45.000004 3 GTATAGG 35 1.2039709E-7 45.000004 2 CGCAAGG 30 2.1548294E-6 45.000004 2 TTTAGTG 25 3.877089E-5 45.0 37 TAATAAC 20 7.0167315E-4 45.0 29 CAGCATT 25 3.877089E-5 45.0 45 ATAGATG 20 7.0167315E-4 45.0 1 GGTTTCA 20 7.0167315E-4 45.0 8 GCGTTGG 25 3.877089E-5 45.0 2 CGTTATT 175 0.0 45.0 1 CGTTAGG 20 7.0167315E-4 45.0 2 CATAGTA 20 7.0167315E-4 45.0 10 CGAGGGC 20 7.0167315E-4 45.0 4 CTCATGC 20 7.0167315E-4 45.0 23 GCGATGC 20 7.0167315E-4 45.0 9 CATGTCT 20 7.0167315E-4 45.0 4 AGCTCTA 20 7.0167315E-4 45.0 10 ACGTAGG 25 3.877089E-5 45.0 2 ATAGTAT 20 7.0167315E-4 45.0 11 >>END_MODULE