##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935153.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 943799 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.031810798697606 33.0 31.0 34.0 30.0 34.0 2 32.34322986144296 34.0 31.0 34.0 30.0 34.0 3 32.395168886595556 34.0 31.0 34.0 30.0 34.0 4 35.906225795958676 37.0 35.0 37.0 35.0 37.0 5 30.41287710624826 37.0 35.0 37.0 0.0 37.0 6 32.884751944005025 37.0 35.0 37.0 17.0 37.0 7 35.05498734370348 37.0 35.0 37.0 32.0 37.0 8 35.619268509502554 37.0 35.0 37.0 35.0 37.0 9 37.492054982045964 39.0 37.0 39.0 35.0 39.0 10 37.43148700093982 39.0 37.0 39.0 35.0 39.0 11 37.31319274548924 39.0 37.0 39.0 34.0 39.0 12 37.15403385678518 39.0 37.0 39.0 34.0 39.0 13 37.10881766138765 39.0 37.0 39.0 33.0 39.0 14 38.283435350111624 40.0 38.0 41.0 34.0 41.0 15 38.39117545155271 40.0 38.0 41.0 34.0 41.0 16 38.468224696148226 40.0 38.0 41.0 34.0 41.0 17 38.45162794196646 40.0 38.0 41.0 34.0 41.0 18 38.41077814237989 40.0 37.0 41.0 34.0 41.0 19 38.39448124017932 40.0 37.0 41.0 34.0 41.0 20 38.31939109916412 40.0 37.0 41.0 34.0 41.0 21 38.284708926370975 40.0 37.0 41.0 34.0 41.0 22 38.23938889530504 40.0 37.0 41.0 34.0 41.0 23 38.171773862866985 40.0 37.0 41.0 34.0 41.0 24 38.1741885719311 40.0 37.0 41.0 34.0 41.0 25 38.1163595214659 40.0 36.0 41.0 34.0 41.0 26 38.03586462795574 40.0 36.0 41.0 34.0 41.0 27 37.99632336970054 40.0 36.0 41.0 34.0 41.0 28 37.924159699258 40.0 36.0 41.0 34.0 41.0 29 37.89070236353292 40.0 36.0 41.0 34.0 41.0 30 37.751310395539726 40.0 36.0 41.0 33.0 41.0 31 33.161013097068334 38.0 33.0 41.0 9.0 41.0 32 34.02142511276236 38.0 33.0 41.0 16.0 41.0 33 35.93602239459885 38.0 34.0 41.0 29.0 41.0 34 36.75341889533682 38.0 35.0 41.0 31.0 41.0 35 36.87962585253852 39.0 35.0 40.0 31.0 41.0 36 37.048309014949155 39.0 35.0 41.0 32.0 41.0 37 37.14344897589423 39.0 35.0 41.0 33.0 41.0 38 37.08824866311577 39.0 35.0 41.0 32.0 41.0 39 37.14997367024123 39.0 35.0 41.0 33.0 41.0 40 37.12437288024251 39.0 35.0 41.0 33.0 41.0 41 37.05557539264186 39.0 35.0 41.0 32.0 41.0 42 36.97557530787805 39.0 35.0 41.0 32.0 41.0 43 36.98561028354554 39.0 35.0 41.0 32.0 41.0 44 36.93255343563619 39.0 35.0 41.0 32.0 41.0 45 36.92658712289375 39.0 35.0 41.0 32.0 41.0 46 36.87320499385992 39.0 35.0 41.0 32.0 41.0 47 36.78464694283423 39.0 35.0 41.0 32.0 41.0 48 36.76679780334584 39.0 35.0 41.0 32.0 41.0 49 36.74649369198315 39.0 35.0 41.0 32.0 41.0 50 36.57302137425447 39.0 35.0 41.0 31.0 41.0 51 35.90159027504797 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 7.0 12 7.0 13 16.0 14 24.0 15 28.0 16 60.0 17 81.0 18 194.0 19 334.0 20 595.0 21 1027.0 22 1641.0 23 2689.0 24 3758.0 25 4822.0 26 5643.0 27 6639.0 28 8042.0 29 10307.0 30 13723.0 31 19406.0 32 29970.0 33 35141.0 34 62932.0 35 92342.0 36 109208.0 37 110709.0 38 167874.0 39 256335.0 40 241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.36929685240183 22.38241405214458 23.376057825871822 11.872231269581764 2 32.2612123979788 24.854126779112924 25.06900303984217 17.815657783066097 3 32.68651481936302 24.068048387421474 26.06338849691513 17.18204829630038 4 28.94122583304284 25.851161105277715 25.620391629997492 19.587221431681957 5 21.800086670996684 39.206970975811586 20.340665756162064 18.652276597029662 6 26.9671826310475 32.75093531567633 24.82297607859301 15.458905974683168 7 77.09819569632941 7.326877862765271 9.317555962657304 6.257370478248017 8 77.4852484480276 5.722192966934697 9.737136826803166 7.05542175823454 9 71.77418073127859 7.652158987241988 12.37477471368374 8.198885567795685 10 39.96528921942066 25.661713987830037 19.138291097998618 15.234705694750684 11 28.44948977483553 25.917700696864483 25.160653910419484 20.472155617880503 12 25.214902749420165 23.862708055422818 29.918022799346044 21.004366395810973 13 23.27550675514596 26.0591503063682 30.102066223846393 20.563276714639454 14 19.43220961242807 28.691384500301442 29.71405987927514 22.162346007995346 15 18.900316698788618 28.321920239373 31.915376049349494 20.862387012488888 16 21.06168792295817 28.488798992158287 29.29702192945744 21.152491155426105 17 20.842149652627306 27.902339375227143 27.303906870000922 23.95160410214463 18 21.443125072181683 27.464746201256833 29.45288138682071 21.639247339740773 19 22.03488242729649 28.75824195617923 27.357943799474256 21.84893181705003 20 22.823291823788754 28.992084119605977 27.770955468272373 20.413668588332897 21 23.114773378653716 27.88676402496718 29.066358408940886 19.932104187438217 22 21.37436043055778 25.60576987261059 28.64900259483216 24.370867101999472 23 20.698474993086453 26.62950479922102 28.847985641010425 23.8240345666821 24 21.931682487478795 26.446944741412103 28.75697049901515 22.864402272093955 25 20.08732791621945 29.68089603824543 26.35412836843438 23.87764767710074 26 19.33240022504792 29.71522538167555 27.439740877029962 23.512633516246574 27 21.478619918012203 29.06349763032171 27.691277485990128 21.766604965675953 28 18.819367259342297 28.500030197107645 29.201238823096865 23.47936372045319 29 21.58097221972051 28.07123126852222 28.052053456297372 22.2957430554599 30 23.85285426240121 28.54590860977814 26.36165115665518 21.23958597116547 31 25.356034494632862 29.422154505355486 24.772223746793546 20.44958725321811 32 25.08955826399477 28.166908420119114 25.40731660025069 21.336216715635427 33 25.32255278931213 27.58383935562551 26.052475156256786 21.041132698805573 34 22.717125150588206 26.44026959130069 29.08913868313062 21.75346657498048 35 22.934968144700303 27.27042516468019 27.798821571118427 21.99578511950108 36 25.579705000746984 27.26205473835001 27.44397906757689 19.71426119332612 37 25.236199656918473 25.866100726955633 29.796704594940238 19.100995021185653 38 22.79839245432555 27.755909891830782 27.854447822046858 21.591249831796812 39 25.4847695324958 26.079917440048145 27.23302313310355 21.202289894352504 40 24.49080789447753 25.463684534524827 28.597720489214336 21.447787081783304 41 22.102905385574683 26.2311148878098 27.467606979876013 24.19837274673951 42 23.789493313724638 24.39428310477125 28.902128525247434 22.91409505625668 43 24.879661877158167 23.74700545349169 29.061590444575593 22.311742224774555 44 22.524817254521352 25.01104578411293 27.13649834339727 25.327638617968447 45 23.35571451124657 24.491231713532223 26.993777276729475 25.159276498491735 46 24.127594964605812 25.666270042667982 28.165954827246054 22.04018016548015 47 21.388134549835293 25.077373466172354 31.268734126651964 22.265757857340386 48 21.524392375919025 23.038909767863707 31.4445130795858 23.992184776631465 49 23.230687890112193 22.19995994909933 31.949387528488586 22.619964632299887 50 22.25155991900818 22.55967637176984 30.46930543473769 24.71945827448429 51 21.363023270844746 22.817676221314073 28.137982769636334 27.681317738204854 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1469.0 1 1664.0 2 1859.0 3 2169.5 4 2480.0 5 2133.0 6 1786.0 7 1893.0 8 2000.0 9 2246.5 10 2493.0 11 2539.0 12 2585.0 13 2597.5 14 2610.0 15 2734.5 16 2859.0 17 2777.5 18 2696.0 19 3102.5 20 3509.0 21 3717.5 22 3926.0 23 4190.0 24 4454.0 25 5023.0 26 6329.0 27 7066.0 28 9001.5 29 10937.0 30 12593.0 31 14249.0 32 15808.0 33 17367.0 34 19049.0 35 20731.0 36 23395.0 37 26059.0 38 28781.5 39 31504.0 40 35473.0 41 39442.0 42 46587.0 43 53732.0 44 61190.0 45 68648.0 46 78280.5 47 87913.0 48 100151.5 49 112390.0 50 110746.5 51 109103.0 52 93349.5 53 77596.0 54 66567.0 55 55538.0 56 47842.5 57 40147.0 58 38744.0 59 37341.0 60 31992.0 61 26643.0 62 25035.5 63 23428.0 64 19481.0 65 15534.0 66 12782.0 67 10030.0 68 8298.5 69 6567.0 70 5518.5 71 4470.0 72 3695.0 73 2920.0 74 2222.0 75 1406.5 76 1289.0 77 1006.5 78 724.0 79 558.0 80 392.0 81 254.5 82 117.0 83 65.5 84 14.0 85 15.5 86 17.0 87 24.5 88 32.0 89 24.5 90 17.0 91 8.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 943799.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.293794120344852 #Duplication Level Percentage of deduplicated Percentage of total 1 66.69284333587396 16.869150486380093 2 13.97795790577987 7.071111789832854 3 6.081035962682728 4.6143741503552995 4 3.1969090546233128 3.2344783779643347 5 1.9262974944231255 2.4361686119237334 6 1.1851486489345455 1.7986143556893153 7 0.7945315776608813 1.4067702703226983 8 0.5650330879723389 1.143346447868403 9 0.43088757553004753 0.9808903462024408 >10 3.264764003779508 19.298009258518558 >50 1.6312732150462572 29.15924655312313 >100 0.24423692143650325 8.583587957024108 >500 0.005257546254014747 0.9780316695866964 >1k 0.003345711252554839 1.7766567881639173 >5k 4.77958750364977E-4 0.6495629370444153 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGCT 5373 0.5692949452160895 TruSeq Adapter, Index 15 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 4273 0.45274470517557236 No Hit GCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 4143 0.4389705858980567 No Hit TCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 1445 0.1531046335077702 No Hit ACTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 1327 0.1406019713943329 TruSeq Adapter, Index 15 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCC 1320 0.13986028804862052 No Hit GCCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTG 1101 0.1166561948041903 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1087 0.11517282811276552 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5954657718433692 0.0 2 0.0 0.0 0.0 1.8414937926401702 0.0 3 0.0 0.0 0.0 2.5672839238015723 0.0 4 0.0 0.0 0.0 3.3517729940379253 0.0 5 0.0 0.0 0.0 5.281315195290523 0.0 6 0.0 0.0 0.0 6.501808118042083 0.0 7 0.0 0.0 0.0 7.559660478555285 0.0 8 0.0 0.0 0.0 9.191363839122525 0.0 9 1.0595476367319736E-4 0.0 0.0 9.807278880354822 0.0 10 1.0595476367319736E-4 0.0 0.0 10.977125426070593 0.0 11 1.0595476367319736E-4 0.0 0.0 12.991113573970729 0.0 12 1.0595476367319736E-4 0.0 0.0 14.511458477917438 0.0 13 1.0595476367319736E-4 0.0 0.0 15.144008417046427 0.0 14 1.0595476367319736E-4 0.0 0.0 15.441105574386071 0.0 15 1.0595476367319736E-4 0.0 0.0 15.963462559294934 0.0 16 1.0595476367319736E-4 0.0 0.0 16.99090590263393 0.0 17 1.0595476367319736E-4 0.0 0.0 18.16202390551378 0.0 18 1.0595476367319736E-4 0.0 0.0 19.383046602083706 0.0 19 1.0595476367319736E-4 0.0 0.0 20.184382479744098 0.0 20 1.0595476367319736E-4 0.0 0.0 20.883472010459855 0.0 21 1.0595476367319736E-4 0.0 0.0 21.67135163313375 0.0 22 1.0595476367319736E-4 0.0 0.0 22.519201652046675 0.0 23 1.0595476367319736E-4 0.0 0.0 23.274023388454534 0.0 24 1.0595476367319736E-4 0.0 0.0 23.911765111003508 0.0 25 1.0595476367319736E-4 0.0 0.0 24.484238699129794 0.0 26 1.0595476367319736E-4 0.0 0.0 25.00638377451131 0.0 27 1.0595476367319736E-4 0.0 0.0 25.509668901958996 0.0 28 1.0595476367319736E-4 0.0 0.0 26.026940058211547 0.0 29 1.0595476367319736E-4 0.0 0.0 26.6204986443088 0.0 30 1.0595476367319736E-4 0.0 0.0 27.213633411351356 0.0 31 1.0595476367319736E-4 0.0 0.0 27.758982579977303 0.0 32 3.178642910195921E-4 0.0 0.0 28.35402453276598 0.0 33 3.178642910195921E-4 0.0 0.0 28.94154369733386 0.0 34 3.178642910195921E-4 0.0 0.0 29.51179223542301 0.0 35 3.178642910195921E-4 0.0 0.0 30.08776233075051 0.0 36 3.178642910195921E-4 0.0 0.0 30.65970614505843 0.0 37 3.178642910195921E-4 0.0 0.0 31.213637649541905 0.0 38 3.178642910195921E-4 0.0 0.0 31.858584296020656 0.0 39 3.178642910195921E-4 0.0 0.0 32.49314737565943 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 20 7.032643E-4 45.000004 13 ATCTCGC 20 7.032643E-4 45.000004 36 TCCGCGA 20 7.032643E-4 45.000004 31 GTTTCGA 20 7.032643E-4 45.000004 13 CCTAGTA 20 7.032643E-4 45.000004 19 TCCGATT 20 7.032643E-4 45.000004 42 CTATCGC 20 7.032643E-4 45.000004 30 TTTCGCG 20 7.032643E-4 45.000004 43 TGACGTA 30 2.1650867E-6 45.000004 26 ATGTACG 35 1.2116107E-7 45.000004 1 CCGTAAC 20 7.032643E-4 45.000004 15 CGGATAT 20 7.032643E-4 45.000004 10 TGCGACG 20 7.032643E-4 45.000004 1 AGCGCTA 30 2.1650867E-6 45.000004 22 TCTCGCA 20 7.032643E-4 45.000004 37 AACGCGT 30 2.1650867E-6 45.000004 37 GTCCGCA 20 7.032643E-4 45.000004 2 TCCGTAC 20 7.032643E-4 45.000004 32 CGTAACG 20 7.032643E-4 45.000004 14 ACCAACG 20 7.032643E-4 45.000004 29 >>END_MODULE