##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935152.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 475325 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99184978698785 33.0 31.0 34.0 30.0 34.0 2 32.30488402671856 34.0 31.0 34.0 30.0 34.0 3 32.3560511229159 34.0 31.0 34.0 30.0 34.0 4 35.88585283753221 37.0 35.0 37.0 35.0 37.0 5 30.398998579919002 37.0 35.0 37.0 0.0 37.0 6 32.855711355388415 37.0 35.0 37.0 17.0 37.0 7 35.0039509809078 37.0 35.0 37.0 32.0 37.0 8 35.52223426076895 37.0 35.0 37.0 33.0 37.0 9 37.33610687424394 39.0 37.0 39.0 34.0 39.0 10 37.36619786461895 39.0 37.0 39.0 34.0 39.0 11 37.266503970967236 39.0 37.0 39.0 34.0 39.0 12 37.02606847946142 39.0 37.0 39.0 34.0 39.0 13 36.88762636091096 39.0 35.0 39.0 33.0 39.0 14 38.027198232788095 40.0 37.0 41.0 33.0 41.0 15 38.18092883816336 40.0 37.0 41.0 33.0 41.0 16 38.27237153526534 40.0 37.0 41.0 34.0 41.0 17 38.255269552411505 40.0 37.0 41.0 34.0 41.0 18 38.19443749013833 40.0 37.0 41.0 34.0 41.0 19 38.1392899595014 40.0 36.0 41.0 34.0 41.0 20 38.010009993162576 40.0 36.0 41.0 34.0 41.0 21 37.96820070478094 40.0 36.0 41.0 34.0 41.0 22 37.95072213748488 40.0 36.0 41.0 34.0 41.0 23 37.89802976910535 40.0 35.0 41.0 34.0 41.0 24 37.86702992689213 40.0 35.0 41.0 34.0 41.0 25 37.79235049702835 40.0 35.0 41.0 33.0 41.0 26 37.70081312785989 40.0 35.0 41.0 33.0 41.0 27 37.633473938883924 40.0 35.0 41.0 33.0 41.0 28 37.59005943301951 40.0 35.0 41.0 33.0 41.0 29 37.5758207542208 40.0 35.0 41.0 33.0 41.0 30 37.41742386787987 39.0 35.0 41.0 33.0 41.0 31 32.83835691369063 38.0 33.0 41.0 9.0 41.0 32 33.66579287855678 38.0 33.0 40.0 16.0 41.0 33 35.534575290590645 38.0 34.0 40.0 27.0 41.0 34 36.3975301109767 38.0 35.0 40.0 31.0 41.0 35 36.514502708673014 39.0 35.0 40.0 31.0 41.0 36 36.64340398674591 39.0 35.0 41.0 31.0 41.0 37 36.73576395098091 39.0 35.0 41.0 31.0 41.0 38 36.709806974175564 39.0 35.0 41.0 31.0 41.0 39 36.68570136222584 39.0 35.0 41.0 31.0 41.0 40 36.664862988481566 39.0 35.0 41.0 31.0 41.0 41 36.58495345290065 39.0 35.0 41.0 31.0 41.0 42 36.4647009940567 39.0 35.0 41.0 31.0 41.0 43 36.43058959659181 39.0 35.0 41.0 31.0 41.0 44 36.34247304475885 39.0 35.0 41.0 31.0 41.0 45 36.33534739388839 39.0 35.0 41.0 31.0 41.0 46 36.28402040708988 39.0 35.0 41.0 31.0 41.0 47 36.207237153526535 39.0 35.0 41.0 31.0 41.0 48 36.177863567033086 39.0 35.0 41.0 31.0 41.0 49 36.1491484773576 39.0 35.0 41.0 31.0 41.0 50 35.97080734234471 38.0 35.0 40.0 30.0 41.0 51 35.35815494661547 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 8.0 11 7.0 12 12.0 13 10.0 14 16.0 15 29.0 16 45.0 17 113.0 18 208.0 19 335.0 20 636.0 21 964.0 22 1451.0 23 2263.0 24 2923.0 25 3486.0 26 3776.0 27 4225.0 28 4872.0 29 5719.0 30 7184.0 31 10276.0 32 16503.0 33 18109.0 34 33595.0 35 51998.0 36 52620.0 37 52887.0 38 78558.0 39 122416.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.38831325934887 21.86987850418135 24.523431336454003 12.218376900015778 2 32.71193393993583 23.98927049913217 25.035502024930313 18.263293536001683 3 31.868090254036712 26.727186661757745 24.22489875348446 17.179824330721086 4 28.75674538473676 27.248093409772263 25.236837952979542 18.75832325251144 5 20.46641771419555 40.94314416451901 20.893493925209068 17.69694419607637 6 26.156629674433283 34.15768158628307 24.150633776889496 15.53505496239415 7 74.7574817230316 8.968600431283859 10.048282753905223 6.225635091779309 8 74.06279913743228 8.276232051754064 10.506285173302478 7.154683637511177 9 68.2533003734287 10.066586020091517 12.890548572029664 8.789565034450114 10 39.37916162625572 24.925261663072636 19.954347025719244 15.741229684952401 11 31.22137484878767 25.73312996370904 23.7525903329301 19.292904854573187 12 27.604060379740176 23.638352706043232 28.16998895492558 20.587597959291013 13 22.64282333140483 28.630095198022403 29.997790985115447 18.72929048545732 14 18.47935622994793 31.31036659127965 29.25535160153579 20.954925577236626 15 18.034397517488035 27.295429443012676 34.49934255509388 20.170830484405407 16 20.224477988744543 27.068637248198602 31.74606847946142 20.960816283595435 17 19.71619418292747 27.558197023089466 25.587334981328564 27.1382738126545 18 21.648977015726082 27.227686319886395 30.742544574764636 20.38079208962289 19 22.59170041550518 28.705412086467152 26.803345079682323 21.89954241834534 20 23.450691632041234 29.396518171777203 27.15552516699101 19.997265029190554 21 21.302687634776206 29.294693104717823 29.188870772629254 20.213748487876714 22 20.013464471677274 28.07636880029454 27.13595960658497 24.774207121443222 23 19.98148635144375 27.72818597801504 28.412980592226372 23.877347078314838 24 21.769315731341713 26.271708830799977 29.23662757060958 22.722347867248725 25 20.779045915952242 29.001209698627257 26.813653815810234 23.406090569610267 26 19.4227107768369 30.838689317835165 27.269552411507913 22.469047493820018 27 22.81912375742913 27.85693998842897 28.57202966391416 20.75190659022774 28 20.11066112659759 27.46057960342923 28.805554094566876 23.6232051754063 29 19.646978383211486 26.091831904486405 30.349129542944304 23.912060169357808 30 22.668910745279547 28.864461158154946 27.161626255719774 21.305001840845737 31 25.754588965444697 28.029663914163994 24.676800084152948 21.538947036238362 32 22.49955293746384 29.247777836217324 24.4948193341398 23.757849892179035 33 21.677799400410247 30.617577447009943 23.96528690895703 23.739336243622784 34 20.76473991479514 27.00552253721138 28.4962920107295 23.73344553726398 35 19.55798664071951 26.580129385157527 27.968863409246303 25.89302056487666 36 24.08646715405249 27.357913006890023 27.472571398516806 21.083048440540683 37 22.264135065481515 27.714090359227896 29.269447220322935 20.752327354967655 38 20.58696681218114 28.99447746278862 24.771682533003734 25.646873192026508 39 21.599537158786095 28.088781360122024 27.6800084152948 22.631673065797088 40 22.861200231420607 25.381370641140272 29.72176931573134 22.035659811707777 41 20.382895913322464 26.00305054436438 26.75095986956293 26.86309367275022 42 23.199915847052015 25.062010203544943 27.892073844211858 23.846000105191184 43 24.0 24.333456056382474 27.727344448535213 23.93919949508231 44 21.255141219165836 25.21369589228423 27.83169410403408 25.699468784515854 45 20.50681112922737 24.732130647451743 27.842633987271864 26.91842423604902 46 22.676274128228055 25.165307947194027 28.787461210750536 23.370956713827383 47 20.549308367958766 24.311786672276863 31.148792931152368 23.990112028612 48 19.085467837795193 23.646347236101615 31.285751853994636 25.982433072108556 49 21.858097091463733 22.023668016620206 31.733235154894018 24.384999737022035 50 20.25224846157892 23.10524378057119 30.239099563456584 26.403408194393307 51 19.78898648293273 24.036396150002627 27.368221743017934 28.806395624046704 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1513.0 1 1570.5 2 1628.0 3 1655.5 4 1683.0 5 1578.0 6 1473.0 7 1474.0 8 1475.0 9 1607.0 10 1739.0 11 1799.0 12 1859.0 13 2082.5 14 2306.0 15 2332.0 16 2358.0 17 2432.5 18 2507.0 19 2421.0 20 2335.0 21 2302.5 22 2270.0 23 2164.0 24 2058.0 25 2597.0 26 3124.5 27 3113.0 28 3817.5 29 4522.0 30 5065.0 31 5608.0 32 6839.5 33 8071.0 34 8955.5 35 9840.0 36 10447.5 37 11055.0 38 13364.0 39 15673.0 40 17053.0 41 18433.0 42 23059.0 43 27685.0 44 32347.5 45 37010.0 46 41599.0 47 46188.0 48 50571.5 49 54955.0 50 54128.5 51 53302.0 52 44966.0 53 36630.0 54 31941.5 55 27253.0 56 24459.0 57 21665.0 58 19641.5 59 17618.0 60 15794.5 61 13971.0 62 12333.0 63 10695.0 64 9153.5 65 7612.0 66 6783.5 67 5955.0 68 4788.5 69 3622.0 70 3003.0 71 2384.0 72 2035.5 73 1687.0 74 1412.0 75 900.5 76 664.0 77 550.0 78 436.0 79 262.5 80 89.0 81 70.0 82 51.0 83 49.0 84 47.0 85 26.0 86 5.0 87 4.5 88 4.0 89 4.5 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 475325.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.643321845737354 #Duplication Level Percentage of deduplicated Percentage of total 1 72.86936707766722 21.60090100978467 2 11.395016466794186 6.755722811253138 3 4.815161975470093 4.282121885346493 4 2.5768660248332607 3.0554747570991263 5 1.5605278432888703 2.3129614553923177 6 0.9985276244770167 1.7759805446539063 7 0.6745888348528879 1.399793776155958 8 0.4735264684989466 1.1229518006551746 9 0.35262644721040853 0.9407717339379346 >10 2.8117199271373976 19.786867781420092 >50 1.291142043140086 26.722236256226072 >100 0.1732301489007271 7.269728161091582 >500 0.004619470637352723 0.9199847492343004 >1k 0.003079647091568482 2.0545032777492365 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGCT 3204 0.6740651133435018 No Hit CCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 2488 0.5234313364540052 No Hit GCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 2175 0.45758165465733974 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1135 0.23878398990164626 No Hit TCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 761 0.16010098353757954 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCC 749 0.15757639509809077 No Hit TGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGCTT 700 0.1472676589701783 Illumina Single End Adapter 2 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 667 0.1403250407615842 No Hit AAAACTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTC 648 0.13632777573239363 No Hit CGCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTG 506 0.10645347919844315 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7033082627675801 0.0 2 0.0 0.0 0.0 2.0470204596854784 0.0 3 0.0 0.0 0.0 2.738968074475359 0.0 4 0.0 0.0 0.0 3.5291642560353442 0.0 5 0.0 0.0 0.0 5.453742176405617 0.0 6 0.0 0.0 0.0 6.69605007100405 0.0 7 0.0 0.0 0.0 7.676011150265608 0.0 8 0.0 0.0 0.0 9.385999053279335 0.0 9 0.0 0.0 0.0 9.954241834534265 0.0 10 0.0 0.0 0.0 11.098301162362594 0.0 11 0.0 0.0 0.0 13.014463787934572 0.0 12 0.0 0.0 0.0 14.474727817808867 0.0 13 0.0 0.0 0.0 15.065691895019198 0.0 14 0.0 0.0 0.0 15.32572450428654 0.0 15 0.0 0.0 0.0 15.788565718192816 0.0 16 0.0 0.0 0.0 16.71782464629464 0.0 17 0.0 0.0 0.0 17.838110766317783 0.0 18 0.001051911849786988 0.0 0.0 19.044653658023456 0.0 19 0.0012622942197443854 0.0 0.0 19.761426392468312 0.0 20 0.0012622942197443854 0.0 0.0 20.402882238468415 0.0 21 0.0012622942197443854 0.0 0.0 21.17772050702151 0.0 22 0.0012622942197443854 0.0 0.0 21.86651238626203 0.0 23 0.0012622942197443854 0.0 0.0 22.500815231683585 0.0 24 0.0012622942197443854 0.0 0.0 23.055383158891285 0.0 25 0.0012622942197443854 0.0 0.0 23.533371903434492 0.0 26 0.0012622942197443854 0.0 0.0 24.01851364855625 0.0 27 0.0012622942197443854 0.0 0.0 24.48324830379214 0.0 28 0.0012622942197443854 0.0 0.0 24.939988428969652 0.0 29 0.0012622942197443854 0.0 0.0 25.474990795771316 0.0 30 0.0012622942197443854 0.0 0.0 26.066165255351603 0.0 31 0.0012622942197443854 0.0 0.0 26.568558354809866 0.0 32 0.0012622942197443854 0.0 0.0 27.12523010571714 0.0 33 0.0012622942197443854 0.0 0.0 27.61121338031873 0.0 34 0.0012622942197443854 0.0 0.0 28.11255456792721 0.0 35 0.001472676589701783 0.0 0.0 28.656603376637037 0.0 36 0.001472676589701783 0.0 0.0 29.189501919739126 0.0 37 0.001472676589701783 0.0 0.0 29.715878609372535 0.0 38 0.001472676589701783 0.0 0.0 30.20859411981276 0.0 39 0.001472676589701783 0.0 0.0 30.80439699153211 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGTA 45 3.8380676E-10 45.000004 31 GCGTAAG 45 3.8380676E-10 45.000004 1 TGATCGA 20 7.029108E-4 45.0 21 TGATCAT 20 7.029108E-4 45.0 30 AGTCCGC 20 7.029108E-4 45.0 23 AAATCGC 20 7.029108E-4 45.0 11 ATTAGGT 20 7.029108E-4 45.0 12 GGTCGCA 20 7.029108E-4 45.0 18 TTTACGG 25 3.887341E-5 45.0 2 TTTACGA 25 3.887341E-5 45.0 17 CGACGGA 20 7.029108E-4 45.0 3 ACGTTAT 20 7.029108E-4 45.0 44 ACGTTAA 20 7.029108E-4 45.0 43 GGGTCGT 55 1.8189894E-12 45.0 7 CGGCCAA 25 3.887341E-5 45.0 23 ACCGCGA 20 7.029108E-4 45.0 41 GACGTAA 25 3.887341E-5 45.0 20 TGGCGTT 35 1.209919E-7 45.0 35 ATTACGA 20 7.029108E-4 45.0 23 TCTTACG 20 7.029108E-4 45.0 28 >>END_MODULE