##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935150.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1244244 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.085545921860984 33.0 31.0 34.0 30.0 34.0 2 32.41497809111396 34.0 31.0 34.0 30.0 34.0 3 32.462729979007335 34.0 31.0 34.0 30.0 34.0 4 35.95802913254956 37.0 35.0 37.0 35.0 37.0 5 30.408261562844586 37.0 35.0 37.0 0.0 37.0 6 32.88986886816412 37.0 35.0 37.0 17.0 37.0 7 35.10383574282858 37.0 35.0 37.0 32.0 37.0 8 35.69219943998122 37.0 35.0 37.0 35.0 37.0 9 37.60612066443559 39.0 37.0 39.0 35.0 39.0 10 37.47946624617037 39.0 37.0 39.0 35.0 39.0 11 37.29732431902424 39.0 37.0 39.0 34.0 39.0 12 37.005889520061984 39.0 35.0 39.0 33.0 39.0 13 36.87081070915351 39.0 35.0 39.0 33.0 39.0 14 37.631645400741334 40.0 37.0 41.0 32.0 41.0 15 37.88881602000894 40.0 37.0 41.0 33.0 41.0 16 38.109073461475404 40.0 37.0 41.0 33.0 41.0 17 38.180016138313704 40.0 37.0 41.0 34.0 41.0 18 38.17329318043728 40.0 36.0 41.0 34.0 41.0 19 38.1815769254262 40.0 36.0 41.0 34.0 41.0 20 38.058967533699175 40.0 36.0 41.0 33.0 41.0 21 38.03553483078882 40.0 36.0 41.0 34.0 41.0 22 38.08060396513867 40.0 36.0 41.0 34.0 41.0 23 38.0479230761812 40.0 36.0 41.0 34.0 41.0 24 38.02800254612439 40.0 36.0 41.0 34.0 41.0 25 37.95581493662015 40.0 35.0 41.0 34.0 41.0 26 37.892153789771136 40.0 35.0 41.0 34.0 41.0 27 37.86027097578931 40.0 35.0 41.0 34.0 41.0 28 37.81923883096884 40.0 35.0 41.0 34.0 41.0 29 37.773398947473325 40.0 35.0 41.0 34.0 41.0 30 37.677261855391706 40.0 35.0 41.0 33.0 41.0 31 33.01653775304522 38.0 33.0 41.0 9.0 41.0 32 33.91157200677681 38.0 33.0 41.0 16.0 41.0 33 35.87492163916402 38.0 34.0 41.0 29.0 41.0 34 36.644064186767224 38.0 35.0 41.0 31.0 41.0 35 36.793605595044056 39.0 35.0 41.0 31.0 41.0 36 36.993499667267834 39.0 35.0 41.0 32.0 41.0 37 37.02639675176252 39.0 35.0 41.0 32.0 41.0 38 36.98989185400934 39.0 35.0 41.0 32.0 41.0 39 36.99793931093901 39.0 35.0 41.0 32.0 41.0 40 36.93786267002292 39.0 35.0 41.0 32.0 41.0 41 36.912051012502374 39.0 35.0 41.0 32.0 41.0 42 36.85913454274242 39.0 35.0 41.0 32.0 41.0 43 36.816752984141374 39.0 35.0 41.0 32.0 41.0 44 36.754618868967825 39.0 35.0 41.0 32.0 41.0 45 36.755396047720545 39.0 35.0 41.0 32.0 41.0 46 36.78098588379771 39.0 35.0 41.0 32.0 41.0 47 36.68140573713838 39.0 35.0 41.0 32.0 41.0 48 36.637582339155344 39.0 35.0 41.0 32.0 41.0 49 36.589209190480325 38.0 35.0 41.0 32.0 41.0 50 36.40002202140416 38.0 35.0 40.0 31.0 41.0 51 35.76728198006179 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 12.0 11 19.0 12 21.0 13 19.0 14 24.0 15 53.0 16 83.0 17 154.0 18 310.0 19 521.0 20 781.0 21 1235.0 22 2147.0 23 3323.0 24 4796.0 25 6229.0 26 7746.0 27 9375.0 28 11442.0 29 14685.0 30 20082.0 31 29346.0 32 43547.0 33 51894.0 34 102318.0 35 116454.0 36 135949.0 37 138255.0 38 208990.0 39 334111.0 40 318.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.52209052243772 21.49031861917759 23.944901482345905 11.042689376038783 2 33.556119217774004 23.166838658655376 25.093148932203007 18.18389319136761 3 34.300667714692615 23.36631721752325 25.233635846345248 17.09937922143888 4 29.48931238567355 25.444848438087707 25.305888555620925 19.759950620617822 5 22.584637739864526 38.691366002166774 21.465645002105695 17.258351255862998 6 27.633567049549768 32.19794509758536 24.75093309672379 15.417554756141078 7 80.5168439630812 6.026149211890916 8.22129743040754 5.235709394620348 8 81.57925615875986 4.669582493465912 8.287040162540467 5.464121185233765 9 76.13996933077435 6.612207894914503 10.521248243913574 6.726574530397575 10 44.95782177772206 21.810593420583103 18.25807478275965 14.973510018935194 11 33.433715573472725 25.35539652994107 23.162820154246273 18.048067742339928 12 30.66279604321982 22.910538447442786 28.218018330809713 18.208647178527684 13 28.67741375485837 23.61675041229855 30.134041233070043 17.571794599773035 14 20.732026837179845 26.539408669039194 33.194132340602 19.534432153178958 15 20.331381947592273 26.42809609690704 34.49106445359592 18.74945750190477 16 26.531773510661893 26.61977875722125 28.183378822803245 18.665068909313607 17 26.11786755652428 25.233796586521617 26.30673726375213 22.34159859320198 18 26.191647297475413 24.537711252776788 29.582300577700195 19.688340872047604 19 25.178903816293268 26.513850980997294 27.383455335127195 20.923789867582244 20 23.339634348246808 31.655125522003726 26.725626163357024 18.279613966392443 21 23.787134999244522 26.46707558967534 31.28799495918807 18.457794451892074 22 21.909448629047034 23.88767797956028 32.451753836064306 21.751119555328376 23 21.195119285284882 25.590720148138146 31.669672507964673 21.5444880586123 24 22.830972060142543 27.83224190753582 28.17389515239776 21.162890879923875 25 23.950768498783198 26.799566644484525 26.924863611960355 22.324801244771926 26 19.952838832254766 27.42806073406824 27.994750225839947 24.624350207837047 27 21.53878178235137 25.852807005699844 30.88887710127596 21.719534110672825 28 20.007731602483116 26.674028566744145 28.376106294263824 24.94213353650892 29 21.45423244958384 28.37401667197109 28.734878367908546 21.43687251053652 30 25.31633666708459 25.46518207039777 29.17104683647259 20.04743442604505 31 26.519396517081862 26.66599155792594 26.420702048794286 20.393909876197917 32 26.932418400249468 27.509877483837574 25.79494054220876 19.76276357370419 33 27.172483853649283 26.018690867707623 26.36524668794867 20.44357859069443 34 22.63454756462559 26.943589842506775 29.920417538682127 20.501445054185513 35 22.999347394883962 28.78896743725507 27.59201571395964 20.619669453901324 36 27.20503373936302 26.84875313845194 26.61857320589852 19.327639916286515 37 23.650184368982288 29.03763249009037 27.217892953472152 20.094290187455194 38 25.17086680747506 27.760632158965603 25.82242711236703 21.246073921192306 39 24.67860001735994 26.05582184844773 26.332536062058566 22.933042072133762 40 26.008885716949408 24.447696754012878 28.479140747313224 21.064276781724484 41 23.10382850952064 24.883543742224195 27.042525421058894 24.970102327196273 42 23.68691349928149 24.68253815168086 29.841333371910977 21.789214977126672 43 23.676304647641462 24.25199558928956 29.81304310087089 22.25865666219809 44 24.030897476700712 24.394893606077265 27.662821761648036 23.911387155573987 45 22.16116774523325 24.184806195569358 27.05377723340438 26.60024882579301 46 23.65830174788868 24.32336422759523 28.08484509469204 23.933488929824055 47 20.906269188358554 25.56693060203626 31.415060068603907 22.11174014100128 48 22.28871507517818 27.686450567573562 28.124949768694883 21.89988458855337 49 25.013662914990952 24.25191521920138 29.444626616644324 21.289795249163348 50 22.28493768103362 24.95402830955986 28.188442138358717 24.5725918710478 51 21.932755954619836 25.299619688742723 26.663500085192293 26.10412427144515 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1150.0 1 1597.0 2 2044.0 3 2352.5 4 2661.0 5 2286.5 6 1912.0 7 2005.0 8 2098.0 9 2254.5 10 2411.0 11 2474.0 12 2537.0 13 2692.0 14 2847.0 15 2866.0 16 2885.0 17 2966.5 18 3048.0 19 3181.0 20 3314.0 21 3950.5 22 4587.0 23 4926.5 24 5266.0 25 6188.5 26 9321.5 27 11532.0 28 12476.5 29 13421.0 30 15985.0 31 18549.0 32 21047.0 33 23545.0 34 25999.5 35 28454.0 36 31366.5 37 34279.0 38 39819.0 39 45359.0 40 49501.5 41 53644.0 42 58844.5 43 64045.0 44 73355.0 45 82665.0 46 93510.0 47 104355.0 48 118982.5 49 133610.0 50 132685.0 51 131760.0 52 115650.0 53 99540.0 54 90284.0 55 81028.0 56 75512.5 57 69997.0 58 67249.0 59 64501.0 60 53642.0 61 42783.0 62 36493.5 63 30204.0 64 27121.5 65 24039.0 66 19873.0 67 15707.0 68 12685.5 69 9664.0 70 8201.0 71 6738.0 72 5807.5 73 4877.0 74 3991.0 75 2466.0 76 1827.0 77 1205.5 78 584.0 79 519.0 80 454.0 81 272.5 82 91.0 83 52.0 84 13.0 85 7.0 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1244244.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.280041079926903 #Duplication Level Percentage of deduplicated Percentage of total 1 69.13146212482802 17.47646202431063 2 13.269398020512016 6.70901854128889 3 5.203447179221713 3.94630075343864 4 2.5709664020641987 2.5997654503717924 5 1.4368895796638428 1.8162313800610423 6 0.9519919749755521 1.443983774108562 7 0.6733738186668973 1.1916042458632485 8 0.4915085421561376 0.9940284909473714 9 0.39789665178498207 0.9052959332420745 >10 4.019726053618727 24.336199782574962 >50 1.6789672849583381 29.254599836185225 >100 0.16605169440930537 6.314432792786658 >500 0.00542652596108782 0.9756440680354994 >1k 0.0028941471792468376 2.036432926785383 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 4778 0.38400828133388626 No Hit CTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCTTCTGCT 4310 0.34639508006468184 Illumina Single End Adapter 1 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCTTCTGC 3851 0.309505209589116 Illumina Single End Adapter 1 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCTTCTGC 3228 0.2594346446516921 Illumina Single End Adapter 1 (95% over 23bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2550 0.2049437248642549 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCC 1341 0.10777628825214347 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.36455871999382755 0.0 2 0.0 0.0 0.0 1.1565255689398541 0.0 3 0.0 0.0 0.0 1.6216272692494398 0.0 4 0.0 0.0 0.0 2.1703942313565507 0.0 5 0.0 0.0 0.0 3.5456871803279744 0.0 6 0.0 0.0 0.0 4.458691382076184 0.0 7 0.0 0.0 0.0 5.248809718994024 0.0 8 0.0 0.0 0.0 6.451869568991291 0.0 9 0.0 0.0 0.0 6.889886549583522 0.0 10 0.0 0.0 0.0 7.8146247842063135 0.0 11 0.0 0.0 0.0 9.40297883694838 0.0 12 0.0 0.0 0.0 10.5847406135774 0.0 13 8.037008818206075E-5 0.0 0.0 11.105538784997155 0.0 14 1.607401763641215E-4 0.0 0.0 11.339817592047861 0.0 15 1.607401763641215E-4 0.0 0.0 11.741989513310894 0.0 16 1.607401763641215E-4 0.0 0.0 12.475205827795834 0.0 17 1.607401763641215E-4 0.0 0.0 13.310894004712901 0.0 18 1.607401763641215E-4 0.0 0.0 14.211601582969257 0.0 19 1.607401763641215E-4 0.0 0.0 14.813010952835617 0.0 20 2.4111026454618227E-4 0.0 0.0 15.38717486280826 0.0 21 2.4111026454618227E-4 0.0 0.0 16.035279253908396 0.0 22 2.4111026454618227E-4 0.0 0.0 16.69953803273313 0.0 23 3.21480352728243E-4 0.0 0.0 17.306091088243143 0.0 24 3.21480352728243E-4 0.0 0.0 17.808002288940113 0.0 25 3.21480352728243E-4 0.0 0.0 18.285802463182463 0.0 26 3.21480352728243E-4 0.0 0.0 18.71779168716104 0.0 27 4.0185044091030375E-4 0.0 0.0 19.263986806446326 0.0 28 4.0185044091030375E-4 0.0 0.0 19.72723999472772 0.0 29 4.0185044091030375E-4 0.0 0.0 20.302127235494 0.0 30 4.0185044091030375E-4 0.0 0.0 21.008982161055226 0.0 31 4.0185044091030375E-4 0.0 0.0 21.482361980447564 0.0 32 4.0185044091030375E-4 0.0 0.0 22.004606813454597 0.0 33 4.0185044091030375E-4 0.0 0.0 22.531834591928913 0.0 34 4.0185044091030375E-4 0.0 0.0 23.129466567650717 0.0 35 4.0185044091030375E-4 0.0 0.0 23.750968459562593 0.0 36 4.0185044091030375E-4 0.0 0.0 24.279160679095096 0.0 37 4.0185044091030375E-4 0.0 0.0 24.877355245434174 0.0 38 4.0185044091030375E-4 0.0 0.0 25.556000270043498 0.0 39 4.0185044091030375E-4 0.0 0.0 26.896091120391176 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTCGT 30 2.165647E-6 45.000004 30 AGCCGTA 20 7.0335116E-4 45.0 12 CGAACCC 40 6.8157533E-9 45.0 19 GTCGATC 20 7.0335116E-4 45.0 21 CGCGCTA 20 7.0335116E-4 45.0 16 CGATTTA 25 3.8909922E-5 45.0 13 CCGTCAA 25 3.8909922E-5 45.0 27 CGCTATA 25 3.8909922E-5 45.0 18 CGTACAT 25 3.8909922E-5 45.0 35 CGTCGTG 20 7.0335116E-4 45.0 21 TATCGAT 20 7.0335116E-4 45.0 25 CGATATA 20 7.0335116E-4 45.0 19 ATCGAAT 50 2.1827873E-11 45.0 10 AGTCGAC 20 7.0335116E-4 45.0 12 TATCCCG 20 7.0335116E-4 45.0 1 CGCAATC 120 0.0 43.125004 20 CGTAAGG 230 0.0 43.04348 2 CGGTCTA 75 0.0 42.000004 31 TAAACGG 60 3.6379788E-12 41.250004 2 AATGCGA 55 6.184564E-11 40.90909 25 >>END_MODULE