##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935145.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 758831 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01875779982631 33.0 31.0 34.0 30.0 34.0 2 32.348072232157094 34.0 31.0 34.0 30.0 34.0 3 32.39767220896353 34.0 31.0 34.0 30.0 34.0 4 35.90606735887174 37.0 35.0 37.0 35.0 37.0 5 30.373815777162505 37.0 35.0 37.0 0.0 37.0 6 32.859640684157604 37.0 35.0 37.0 17.0 37.0 7 35.07153503217449 37.0 35.0 37.0 32.0 37.0 8 35.63761100956603 37.0 35.0 37.0 35.0 37.0 9 37.501927306607136 39.0 37.0 39.0 35.0 39.0 10 37.465950916607255 39.0 37.0 39.0 35.0 39.0 11 37.32305348621762 39.0 37.0 39.0 35.0 39.0 12 36.98658726383081 39.0 35.0 39.0 33.0 39.0 13 36.805407264595146 39.0 35.0 39.0 33.0 39.0 14 37.642850647904474 40.0 36.0 41.0 33.0 41.0 15 37.89506622686738 40.0 37.0 41.0 33.0 41.0 16 38.10356324398977 40.0 36.0 41.0 33.0 41.0 17 38.16519488529067 40.0 36.0 41.0 34.0 41.0 18 38.140003505391846 40.0 36.0 41.0 34.0 41.0 19 38.1227190243941 40.0 36.0 41.0 34.0 41.0 20 38.02559331392629 40.0 36.0 41.0 33.0 41.0 21 37.983815895765986 40.0 36.0 41.0 34.0 41.0 22 38.01169166784172 40.0 36.0 41.0 34.0 41.0 23 37.96721140807374 40.0 35.0 41.0 34.0 41.0 24 37.938215491987016 40.0 35.0 41.0 34.0 41.0 25 37.893113222838814 40.0 35.0 41.0 34.0 41.0 26 37.82838734843463 40.0 35.0 41.0 34.0 41.0 27 37.768957778477684 40.0 35.0 41.0 34.0 41.0 28 37.72405449961849 40.0 35.0 41.0 34.0 41.0 29 37.69431138158562 40.0 35.0 41.0 33.0 41.0 30 37.543583485650956 39.0 35.0 41.0 33.0 41.0 31 32.90433179456295 38.0 33.0 41.0 9.0 41.0 32 33.70554840274053 38.0 33.0 40.0 16.0 41.0 33 35.66302378263408 38.0 34.0 40.0 28.0 41.0 34 36.495464734571996 38.0 35.0 40.0 31.0 41.0 35 36.51774505785873 38.0 35.0 40.0 31.0 41.0 36 36.7286339118987 39.0 35.0 40.0 31.0 41.0 37 36.8144105868105 39.0 35.0 41.0 31.0 41.0 38 36.75791447634585 39.0 35.0 41.0 31.0 41.0 39 36.81341036409952 39.0 35.0 41.0 32.0 41.0 40 36.76571199647879 39.0 35.0 41.0 32.0 41.0 41 36.62987015554188 39.0 35.0 41.0 31.0 41.0 42 36.56307794489155 39.0 35.0 41.0 31.0 41.0 43 36.604927842958446 39.0 35.0 41.0 31.0 41.0 44 36.60819207438811 39.0 35.0 40.0 31.0 41.0 45 36.62077458617268 39.0 35.0 40.0 32.0 41.0 46 36.6087442394947 38.0 35.0 40.0 32.0 41.0 47 36.490370056046736 38.0 35.0 40.0 31.0 41.0 48 36.46053337304354 38.0 35.0 40.0 31.0 41.0 49 36.45544396578421 38.0 35.0 40.0 31.0 41.0 50 36.269652926672734 38.0 35.0 40.0 31.0 41.0 51 35.58374789643544 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 6.0 11 11.0 12 10.0 13 17.0 14 21.0 15 36.0 16 56.0 17 91.0 18 177.0 19 337.0 20 545.0 21 869.0 22 1414.0 23 2193.0 24 2978.0 25 3769.0 26 4630.0 27 5668.0 28 6971.0 29 8975.0 30 12354.0 31 18364.0 32 27489.0 33 33236.0 34 63568.0 35 77227.0 36 84984.0 37 89141.0 38 134302.0 39 179228.0 40 158.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.083201661503026 20.62066520740455 24.140816598162175 11.155316532930257 2 33.32454789010992 23.838904841789542 24.297768541348468 18.53877872675207 3 32.474160913299535 22.970595560803396 26.459910045846836 18.095333480050236 4 29.115573823420497 25.42357916321289 26.445545846176554 19.01530116719006 5 22.76686113245242 38.38957554448882 21.486602418720373 17.356960904338383 6 27.189057906174103 32.960962322308916 23.68445674992192 16.165523021595057 7 77.53557775051362 6.378231780198754 9.972708020626463 6.1134824486611645 8 77.5828873622717 5.600983618223294 9.835259761396149 6.9808692581088545 9 71.81467283229071 7.6773352696450194 11.951673033916643 8.556318864147617 10 43.36367386150539 23.644922255416557 18.147782576094016 14.843621306984032 11 33.113565471099626 23.879625371130068 23.18184154311039 19.824967614659915 12 29.085000481003014 21.755832326301906 29.794117530780902 19.36504966191418 13 26.030565435518582 23.849052028712585 31.326342756160464 18.794039779608372 14 19.73390649564923 28.015197059687864 31.67530056099448 20.57559588366843 15 18.950991722794665 25.606623872772726 35.41065138350963 20.031733020922974 16 23.5953723556365 26.21097451211139 29.534244120232305 20.659409012019804 17 23.702379054097683 26.19489715101254 25.606755654421075 24.495968140468694 18 24.19906408673341 25.12509372969739 29.493260027595074 21.18258215597412 19 23.617643454207855 26.879107469252045 27.293824316613318 22.209424759926783 20 23.493373359812658 29.826799379572 27.285126727822135 19.394700532793205 21 23.351049179593346 26.7873874419996 30.47463796286657 19.38692541554048 22 20.273025219054045 24.11327423365677 30.736224534843725 24.87747601244546 23 20.368303350811974 26.722550871010803 30.629217836382537 22.279927941794682 24 23.149950384209394 26.193579334529034 28.101514039357905 22.554956241903664 25 21.770196525972185 26.83865050320822 27.099446385295277 24.291706585524313 26 19.336980170815373 27.382249802656982 28.007158379138435 25.27361164738921 27 21.651988387401147 27.281700404965004 28.982474358585776 22.083836849048076 28 19.922617816088167 27.042648494855904 28.089258346061246 24.945475342994687 29 21.01073888652414 27.844144480127987 28.92343618012443 22.221680453223446 30 25.40921496354261 27.553697727161914 26.59524979870353 20.441837510591952 31 27.38238158430533 26.83693734177966 25.260960609147492 20.51972046476752 32 25.991953412551677 27.765339054413964 24.851515027720268 21.391192505314095 33 27.95536819133641 25.131814593763302 25.21773622848829 21.695080986411995 34 24.400294663765713 24.230428119040997 29.573383269792615 21.795893947400675 35 22.72047399223279 27.44932666166775 28.66079535496046 21.169403991139003 36 28.02679384474277 25.795730538156718 26.35856995826475 19.81890565883576 37 24.42256576233707 28.963761364519904 27.19538342529496 19.41828944784807 38 24.78430638706115 27.361691865514192 25.616639278047415 22.23736246937724 39 26.157998289474204 24.37262051761196 26.334585698264828 23.13479549464901 40 27.266413733756266 22.71941973904598 28.852537653311476 21.16162887388628 41 23.147446532890722 23.562031598603642 27.50717880529393 25.783343063211706 42 23.30677054574734 23.42840500717551 30.19512908671364 23.069695360363507 43 24.82660829618189 23.556760332669594 28.695585710125183 22.92104566102334 44 23.361723493109796 24.661090545852765 26.8141391166149 25.16304684442254 45 22.2388120675091 23.675363816185683 26.889913564416844 27.195910551888364 46 24.92649878563211 23.477559562010512 27.633425624414393 23.962516027942982 47 21.333472143336262 24.62550950079794 31.49304654132475 22.54797181454105 48 22.31537720520116 24.39146529332618 29.74680791902281 23.546349582449846 49 24.961552704093535 22.222866488058607 30.397282135284403 22.418298672563456 50 22.23986632069591 23.28278628574742 29.380323154958088 25.097024238598582 51 21.765584168279894 23.937872859701304 26.596962960132096 27.699580011886702 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1045.0 1 1194.0 2 1343.0 3 1527.5 4 1712.0 5 1379.0 6 1046.0 7 1059.5 8 1073.0 9 1250.5 10 1428.0 11 1553.5 12 1679.0 13 1759.5 14 1840.0 15 1898.0 16 1956.0 17 1959.0 18 1962.0 19 2209.5 20 2457.0 21 2375.0 22 2293.0 23 2761.5 24 3230.0 25 3346.0 26 3885.5 27 4309.0 28 5784.0 29 7259.0 30 8441.0 31 9623.0 32 10804.5 33 11986.0 34 14441.5 35 16897.0 36 18125.5 37 19354.0 38 20832.0 39 22310.0 40 25988.5 41 29667.0 42 34538.5 43 39410.0 44 45298.5 45 51187.0 46 59075.5 47 66964.0 48 77481.5 49 87999.0 50 87379.0 51 86759.0 52 75390.0 53 64021.0 54 56521.0 55 49021.0 56 44385.0 57 39749.0 58 37312.0 59 34875.0 60 31293.5 61 27712.0 62 23383.0 63 19054.0 64 17113.0 65 15172.0 66 13179.5 67 11187.0 68 9484.0 69 7781.0 70 5996.5 71 4212.0 72 3377.0 73 2542.0 74 1884.5 75 1102.5 76 978.0 77 798.5 78 619.0 79 457.5 80 296.0 81 177.5 82 59.0 83 46.5 84 34.0 85 38.0 86 42.0 87 21.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 758831.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.937042417170026 #Duplication Level Percentage of deduplicated Percentage of total 1 68.4867410208055 19.133169889119817 2 13.344395984909374 7.456059133238532 3 5.623476916754386 4.713099394660314 4 2.9057008152717243 3.2470674771140677 5 1.6635951374010576 2.3237963959285577 6 0.9976697417450017 1.6723165136074307 7 0.7161101908268493 1.4004200543548186 8 0.5162586957151896 1.1538192864342498 9 0.3757652125536201 0.9447991813806655 >10 4.015188735200335 26.977191421761958 >50 1.2557344705247921 23.257328691134877 >100 0.08915822160268964 4.318866641613868 >500 0.007519368086973826 1.5375543368174722 >1k 0.002685488602490652 1.8645115828334058 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGCT 3495 0.4605768609874926 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 3184 0.41959276835026504 TruSeq Adapter, Index 21 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 2962 0.3903372424162956 TruSeq Adapter, Index 21 (95% over 22bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1767 0.23285817263659497 No Hit TCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 1018 0.13415371802153575 TruSeq Adapter, Index 21 (95% over 22bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 924 0.12176624307652165 No Hit GCCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTG 871 0.11478181571390732 TruSeq Adapter, Index 21 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCC 852 0.11227796439523426 No Hit ACTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 848 0.11175083780182939 TruSeq Adapter, Index 15 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGC 826 0.1088516415381027 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCG 789 0.10397572054910778 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 786 0.10358037560405413 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.48482468428411596 0.0 2 0.0 0.0 0.0 1.59798426790682 0.0 3 0.0 0.0 0.0 2.287861197025425 0.0 4 0.0 0.0 0.0 3.032295728561432 0.0 5 0.0 0.0 0.0 4.965268946577037 0.0 6 0.0 0.0 0.0 6.072234792727234 0.0 7 0.0 0.0 0.0 7.075883826570079 0.0 8 0.0 0.0 0.0 8.639604865905584 0.0 9 0.0 0.0 0.0 9.26108711952991 0.0 10 0.0 0.0 0.0 10.574423026998106 0.0 11 0.0 0.0 0.0 12.507396245013712 0.0 12 0.0 0.0 0.0 14.071249065997568 0.0 13 0.0 0.0 0.0 14.737800643358007 0.0 14 0.0 0.0 0.0 15.045510792258092 0.0 15 0.0 0.0 0.0 15.59569917412441 0.0 16 0.0 0.0 0.0 16.59262734390134 0.0 17 0.0 0.0 0.0 17.66164007532639 0.0 18 0.0 0.0 0.0 18.877721126311393 0.0 19 0.0 0.0 0.0 19.718356261143786 0.0 20 0.0 0.0 0.0 20.492573445207167 0.0 21 0.0 0.0 0.0 21.28326333531445 0.0 22 0.0 0.0 0.0 22.067364143004173 0.0 23 0.0 0.0 0.0 22.811139766298425 0.0 24 0.0 0.0 0.0 23.437629722560096 0.0 25 0.0 0.0 0.0 24.024716965964753 0.0 26 0.0 0.0 0.0 24.562122527941003 0.0 27 0.0 0.0 0.0 25.200868177499338 0.0 28 0.0 0.0 0.0 25.754351100574436 0.0 29 0.0 0.0 0.0 26.455561251451247 0.0 30 0.0 0.0 0.0 27.212119694635565 0.0 31 0.0 0.0 0.0 27.774168424853492 0.0 32 0.0 0.0 0.0 28.38853446946685 0.0 33 0.0 0.0 0.0 28.989195222651684 0.0 34 0.0 0.0 0.0 29.623460296166076 0.0 35 0.0 0.0 0.0 30.279073996713365 0.0 36 0.0 0.0 0.0 30.85192882209609 0.0 37 0.0 0.0 0.0 31.52243384890707 0.0 38 0.0 0.0 0.0 32.264496310772756 0.0 39 0.0 0.0 0.0 33.45988764296661 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCTA 45 3.8380676E-10 45.000004 31 ACGCTAA 65 0.0 45.000004 25 CTTCGTC 20 7.031769E-4 45.0 29 CTTAACG 25 3.8895487E-5 45.0 1 AACGTAG 25 3.8895487E-5 45.0 1 CGGGTAG 55 1.8189894E-12 45.0 6 TCGCAAG 20 7.031769E-4 45.0 2 AAATCCG 25 3.8895487E-5 45.0 15 CTCGTAT 20 7.031769E-4 45.0 28 CTATCGA 20 7.031769E-4 45.0 11 TTAGACG 35 1.2111923E-7 45.0 1 GGTCCGT 20 7.031769E-4 45.0 9 GATTTCG 20 7.031769E-4 45.0 9 TTCGTCG 20 7.031769E-4 45.0 30 TTCGTAG 35 1.2111923E-7 45.0 1 TAAGTCG 20 7.031769E-4 45.0 25 TAACGCG 20 7.031769E-4 45.0 1 CAGATAG 40 6.8102963E-9 45.0 1 CGCTATC 20 7.031769E-4 45.0 1 TACGACG 35 1.2111923E-7 45.0 1 >>END_MODULE