##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935142.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 683252 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.977554401597068 33.0 31.0 34.0 30.0 34.0 2 32.308366459227344 34.0 31.0 34.0 30.0 34.0 3 32.37222137659312 34.0 31.0 34.0 30.0 34.0 4 35.88195716953628 37.0 35.0 37.0 35.0 37.0 5 30.416118796578715 37.0 35.0 37.0 0.0 37.0 6 32.85816214222571 37.0 35.0 37.0 17.0 37.0 7 35.03049240982829 37.0 35.0 37.0 32.0 37.0 8 35.594099980680625 37.0 35.0 37.0 35.0 37.0 9 37.4397440475842 39.0 37.0 39.0 35.0 39.0 10 37.3696000889862 39.0 37.0 39.0 34.0 39.0 11 37.27503175987776 39.0 37.0 39.0 34.0 39.0 12 37.118039903286046 39.0 37.0 39.0 34.0 39.0 13 37.06423837764105 39.0 37.0 39.0 33.0 39.0 14 38.26438122391153 40.0 38.0 41.0 33.0 41.0 15 38.38252943277151 40.0 38.0 41.0 34.0 41.0 16 38.45758958627271 40.0 38.0 41.0 34.0 41.0 17 38.43873124410906 40.0 38.0 41.0 34.0 41.0 18 38.385087786058435 40.0 37.0 41.0 34.0 41.0 19 38.36067658784753 40.0 37.0 41.0 34.0 41.0 20 38.2686739299702 40.0 37.0 41.0 34.0 41.0 21 38.23606370709489 40.0 37.0 41.0 34.0 41.0 22 38.21302242803534 40.0 37.0 41.0 34.0 41.0 23 38.15079648504505 40.0 37.0 41.0 34.0 41.0 24 38.114805371956464 40.0 37.0 41.0 34.0 41.0 25 38.07028739030402 40.0 36.0 41.0 34.0 41.0 26 37.98682184611241 40.0 36.0 41.0 34.0 41.0 27 37.94536130154028 40.0 36.0 41.0 34.0 41.0 28 37.855985785625215 40.0 36.0 41.0 33.0 41.0 29 37.87912805231452 40.0 36.0 41.0 34.0 41.0 30 37.74131213666407 40.0 36.0 41.0 33.0 41.0 31 33.10033194194821 38.0 33.0 41.0 9.0 41.0 32 34.00374386024483 38.0 33.0 41.0 16.0 41.0 33 35.993545573229206 39.0 34.0 41.0 30.0 41.0 34 36.79929074484963 39.0 35.0 41.0 31.0 41.0 35 36.964992418609825 39.0 35.0 41.0 32.0 41.0 36 37.118325303109245 39.0 35.0 41.0 32.0 41.0 37 37.18781650108598 39.0 35.0 41.0 32.0 41.0 38 37.16705695702318 39.0 35.0 41.0 32.0 41.0 39 37.19902905516559 39.0 35.0 41.0 32.0 41.0 40 37.1722439158612 39.0 35.0 41.0 32.0 41.0 41 37.13135856170198 39.0 35.0 41.0 32.0 41.0 42 37.054758712744345 39.0 35.0 41.0 32.0 41.0 43 37.003537494218826 39.0 35.0 41.0 32.0 41.0 44 36.901471199498864 39.0 35.0 41.0 32.0 41.0 45 36.85986868680955 39.0 35.0 41.0 32.0 41.0 46 36.80140416713014 39.0 35.0 41.0 31.0 41.0 47 36.71114317996874 39.0 35.0 41.0 31.0 41.0 48 36.71527781843302 39.0 35.0 41.0 31.0 41.0 49 36.670530053333174 39.0 35.0 41.0 31.0 41.0 50 36.49392025197145 39.0 35.0 41.0 31.0 41.0 51 35.84845415747045 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 4.0 11 6.0 12 12.0 13 10.0 14 14.0 15 31.0 16 47.0 17 79.0 18 171.0 19 299.0 20 491.0 21 855.0 22 1332.0 23 2122.0 24 2993.0 25 3584.0 26 4371.0 27 5174.0 28 6293.0 29 7709.0 30 9922.0 31 13986.0 32 21667.0 33 25142.0 34 44381.0 35 66892.0 36 77719.0 37 77264.0 38 119255.0 39 191273.0 40 149.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.70693682565144 21.36093271589399 23.22042233319478 12.711708125259788 2 33.095695292512865 24.177463073653644 24.73348047279774 17.993361161035754 3 31.3584153430945 24.50311158986728 25.73647790273574 18.40199516430248 4 27.581917067202145 25.8304403060657 26.39875185143988 20.18889077529228 5 22.228840896184717 38.968052782867815 21.300047420278318 17.503058900669153 6 26.077201383969605 32.748971097047644 25.051079250408343 16.122748268574405 7 76.90808076668637 6.9906857206418715 9.653392891641737 6.447840621030015 8 76.58857932358778 6.278357033715233 10.063490483745383 7.069573158951601 9 70.66411807063865 8.567849051301716 12.559494886220604 8.208537991839028 10 37.97134878492855 25.827366769508174 20.659873663011595 15.54141078255168 11 28.526224584779847 25.454297974978484 25.62787961103663 20.39159782920504 12 26.335963890336217 23.41932405613156 30.14144122519949 20.10327082833274 13 23.209152699150533 26.791871813035307 30.483189218619195 19.51578626919497 14 19.139497579224063 29.24396855040307 30.04923512847383 21.567298741899034 15 19.035729130686775 26.91774045301002 33.902571818304224 20.14395859799898 16 21.060604286558984 27.085028657069426 30.833572386176694 21.020794670194892 17 20.38793885711275 27.33252152939179 28.00123526897836 24.278304344517103 18 21.724195465216347 27.20079853406942 30.563247527998456 20.511758472715776 19 20.77432631005837 28.32102942984433 28.373425910205896 22.531218349891404 20 22.862428503685315 27.062343030097242 29.943417655564858 20.131810810652585 21 22.248013909948305 28.64828789377858 29.572983320941614 19.530714875331505 22 20.316662080754977 26.19897197520095 29.588058285961843 23.89630765808223 23 19.709858148969925 27.553816161533373 28.804160104910046 23.932165584586652 24 21.861333739235302 26.83138871163202 29.044335033047837 22.26294251608484 25 20.065217518572943 27.94664340536142 27.009361114200907 24.97877796186473 26 21.052115471304877 28.973058256690067 27.75930403423627 22.215522237768788 27 22.585078419089882 27.598748338826667 28.754837161106007 21.061336080977444 28 18.708909743403606 26.235854413891214 31.832032690720265 23.22320315198492 29 21.679116929039356 24.963995714611887 30.525926012657116 22.830961343691637 30 25.128064023230085 25.427807017030318 29.14268820288854 20.301440756851058 31 24.807391709061957 27.551181701626927 26.811922980101045 20.82950360921007 32 22.273919432361705 26.696299461984747 29.224063742221023 21.805717363432525 33 24.307429762371715 24.83637076803288 29.07755849964581 21.778640969949596 34 20.479852236071025 24.374754848869816 32.644763571859286 22.500629343199876 35 22.33978093002289 23.928652971378057 30.215352461463706 23.516213637135348 36 24.61170988156639 23.61266414148806 30.60495980985054 21.17066616709501 37 20.7254424429054 25.64983344359036 33.572532535579846 20.052191577924397 38 20.905610228729664 26.022463161468973 29.644845532834154 23.42708107696721 39 23.977683197414716 23.64837570910879 31.857352777598898 20.516588315877595 40 23.384344282929284 23.64149684157529 30.81191127139035 22.162247604105072 41 20.676997652403507 24.346653943201044 28.932809563674894 26.043538840720554 42 22.651086275634757 22.843694566572804 30.196325806583808 24.30889335120863 43 23.712919976816753 22.37622429206208 30.888310608677326 23.02254512244384 44 21.833671910217607 23.406737192134088 29.929074484963085 24.830516412685217 45 22.66469765181807 23.651888322317387 28.69819627311739 24.985217752747158 46 23.721994227605627 23.296382593830682 30.391129480777224 22.590493697786467 47 20.27348621006598 23.165391392926768 33.22815008225369 23.33297231475356 48 20.680071188961026 22.202057220469168 32.88464578222969 24.233225808340116 49 22.242159554600647 21.02547815447302 33.795583474325724 22.936778816600608 50 21.38713095607477 20.75617780848062 33.07213151223853 24.78455972320608 51 20.35456903163108 21.345857750873762 30.165297723241206 28.134275494253952 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 876.0 1 1179.0 2 1482.0 3 1645.5 4 1809.0 5 1512.0 6 1215.0 7 1253.5 8 1292.0 9 1390.5 10 1489.0 11 1757.0 12 2025.0 13 2028.5 14 2032.0 15 2142.5 16 2253.0 17 2146.0 18 2039.0 19 2245.5 20 2452.0 21 2395.0 22 2338.0 23 3056.5 24 3775.0 25 4005.0 26 4959.5 27 5684.0 28 7534.5 29 9385.0 30 9547.0 31 9709.0 32 11387.0 33 13065.0 34 15028.5 35 16992.0 36 17959.0 37 18926.0 38 21114.0 39 23302.0 40 27394.0 41 31486.0 42 36850.5 43 42215.0 44 47014.0 45 51813.0 46 58603.0 47 65393.0 48 72499.5 49 79606.0 50 78589.5 51 77573.0 52 67158.0 53 56743.0 54 48187.5 55 39632.0 56 34162.0 57 28692.0 58 26553.5 59 24415.0 60 21279.0 61 18143.0 62 16865.5 63 15588.0 64 12692.0 65 9796.0 66 7742.0 67 5688.0 68 4833.5 69 3979.0 70 3291.5 71 2604.0 72 1911.5 73 1219.0 74 1029.0 75 705.0 76 571.0 77 477.0 78 383.0 79 380.5 80 378.0 81 245.0 82 112.0 83 59.5 84 7.0 85 4.0 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 683252.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.09438472370604 #Duplication Level Percentage of deduplicated Percentage of total 1 69.56829653557966 20.24046783979021 2 13.439195612591389 7.820102550597524 3 5.299315395292923 4.62540962648732 4 2.679323565929591 3.1181308250578996 5 1.5062310791605102 2.191143324994941 6 0.9796633294886798 1.7101621084710268 7 0.6376159883936822 1.2985731410618313 8 0.43553352795443234 1.013726401790339 9 0.33448306083870344 0.8758420970043611 >10 3.9550810033442336 29.477032577302705 >50 1.062612426349724 20.281132124236066 >100 0.09519355789209594 4.463891228746236 >500 0.0057345516802467435 1.1321983135216578 >1k 0.0017203655040740227 1.7521878409378795 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 3832 0.5608472423059135 No Hit CTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGCT 3716 0.5438696117976969 No Hit GCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 2954 0.43234414242475694 No Hit TCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 944 0.13816278620479705 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCC 862 0.12616135774209222 No Hit CGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTG 811 0.11869705467382459 No Hit ACTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 744 0.1088910094664926 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 696 0.10186578304929952 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.573580465187076 0.0 2 0.0 0.0 0.0 1.8856878574815734 0.0 3 0.0 0.0 0.0 2.5557188270213627 0.0 4 0.0 0.0 0.0 3.3080034891957872 0.0 5 0.0 0.0 0.0 5.117877444925152 0.0 6 0.0 0.0 0.0 6.2271314244232 0.0 7 0.0 0.0 0.0 7.181976781626691 0.0 8 0.0 0.0 0.0 8.769531593028633 0.0 9 0.0 0.0 0.0 9.331256988636696 0.0 10 0.0 0.0 0.0 10.557012639553196 0.0 11 0.0 0.0 0.0 12.504756663719974 0.0 12 0.0 0.0 0.0 13.997324559606119 0.0 13 0.0 0.0 0.0 14.650670616405074 0.0 14 0.0 0.0 0.0 14.933435979697096 0.0 15 0.0 0.0 0.0 15.446862943686956 0.0 16 0.0 0.0 0.0 16.42527208116478 0.0 17 0.0 0.0 0.0 17.627171234039565 0.0 18 0.0 0.0 0.0 18.83624197221523 0.0 19 0.0 0.0 0.0 19.654680849818224 0.0 20 0.0 0.0 0.0 20.365545947907947 0.0 21 0.0 0.0 0.0 21.174764215838373 0.0 22 0.0 0.0 0.0 21.978713563955903 0.0 23 0.0 0.0 0.0 22.744024166778875 0.0 24 0.0 0.0 0.0 23.363268603677707 0.0 25 0.0 0.0 0.0 23.944898807467816 0.0 26 0.0 0.0 0.0 24.48789026596336 0.0 27 0.0 0.0 0.0 24.989901237025286 0.0 28 0.0 0.0 0.0 25.534795361008822 0.0 29 0.0 0.0 0.0 26.11232751605557 0.0 30 0.0 0.0 0.0 26.711081709237586 0.0 31 0.0 0.0 0.0 27.248218812385474 0.0 32 0.0 0.0 0.0 27.83043445171035 0.0 33 1.463588836915223E-4 0.0 0.0 28.414406397639524 0.0 34 1.463588836915223E-4 0.0 0.0 28.991792193802578 0.0 35 1.463588836915223E-4 0.0 0.0 29.586301979357543 0.0 36 1.463588836915223E-4 0.0 0.0 30.153881730313266 0.0 37 1.463588836915223E-4 0.0 0.0 30.744732543775942 0.0 38 1.463588836915223E-4 0.0 0.0 31.34538940244595 0.0 39 1.463588836915223E-4 0.0 0.0 31.93463026818802 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCGCG 40 6.8084773E-9 45.0 1 GTACCGG 45 3.8380676E-10 45.0 2 TCCGCTT 20 7.0312765E-4 45.0 31 TCCGCTA 25 3.8891383E-5 45.0 27 GTCGATT 20 7.0312765E-4 45.0 32 CAACGAA 20 7.0312765E-4 45.0 14 CGACGGA 20 7.0312765E-4 45.0 21 GACGTTC 25 3.8891383E-5 45.0 42 CGCATCG 20 7.0312765E-4 45.0 21 CGCGATT 25 3.8891383E-5 45.0 27 CGATTAT 25 3.8891383E-5 45.0 34 CACGACG 20 7.0312765E-4 45.0 26 CGCGAGG 70 0.0 45.0 2 CGTTCTA 20 7.0312765E-4 45.0 44 TAACGCC 35 1.2109558E-7 45.0 12 ATCCGTT 25 3.8891383E-5 45.0 40 GTGGACG 35 1.2109558E-7 45.0 12 ACGATTC 25 3.8891383E-5 45.0 24 ACGATCT 20 7.0312765E-4 45.0 12 TAATTCG 20 7.0312765E-4 45.0 26 >>END_MODULE